FFCP PHASE1:Hg19::chr9:85882145..85882188,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:85882145..85882188,- to FFCP PHASE1:Hg19::chr9:85882145..85882188,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=257019 | |EntrezGene=257019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24125 | |HGNC=24125 | ||
|TSSclassifier=strong | |||
|UniProt=A2A2Y4 | |UniProt=A2A2Y4 | ||
|association_with_transcript=13bp_to_ENST00000328788,NM_001244962,uc004amq.1_5end | |||
|cluster_id=chr9:85882145..85882188,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_FRMD3_5end | |||
|id=chr9:85882145..85882188,- | |||
|ontology_enrichment_celltype=CL:0002139!2.67e-15!24;CL:0000071!4.38e-10!18;CL:0002546!4.38e-10!18;CL:0000115!5.85e-10!35;CL:0002078!1.27e-07!44;CL:0005020!4.11e-07!6;CL:0002138!4.11e-07!6;CL:0005022!4.11e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.70e-09;2!DOID:1909;9.08e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.87e-09,2;DOID:1909,8.77e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001009!1.63e-33!113;UBERON:0004535!2.75e-30!110;UBERON:0004872!4.30e-20!84;UBERON:0000055!2.55e-17!69;UBERON:0007023!3.49e-16!115;UBERON:0000178!3.86e-15!15;UBERON:0000179!3.86e-15!15;UBERON:0000463!3.86e-15!15;UBERON:0001981!2.71e-14!60;UBERON:0007500!2.71e-14!60;UBERON:0004537!2.71e-14!60;UBERON:0006965!2.71e-14!60;UBERON:0002049!1.15e-13!79;UBERON:0007798!1.15e-13!79;UBERON:0007100!7.28e-12!27;UBERON:0003914!1.36e-10!118;UBERON:0003081!3.37e-10!216;UBERON:0001986!4.38e-10!18;UBERON:0004638!4.38e-10!18;UBERON:0004852!4.38e-10!18;UBERON:0004111!1.09e-08!241;UBERON:0000948!1.17e-08!24;UBERON:0005498!1.17e-08!24;UBERON:0004140!1.17e-08!24;UBERON:0009881!1.17e-08!24;UBERON:0004141!1.17e-08!24;UBERON:0003084!1.17e-08!24;UBERON:0007005!1.17e-08!24;UBERON:0004139!1.17e-08!24;UBERON:0004291!1.17e-08!24;UBERON:0000025!1.48e-08!194;UBERON:0001637!1.48e-08!42;UBERON:0003509!1.48e-08!42;UBERON:0004572!1.48e-08!42;UBERON:0000487!1.29e-07!22;UBERON:0000477!2.33e-07!286;UBERON:0003103!2.51e-07!69;UBERON:0006914!2.58e-07!25;UBERON:0000947!4.94e-07!21;UBERON:0010191!4.94e-07!21;UBERON:0000467!8.13e-07!625;UBERON:0000480!9.40e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.47e-28;15!UBERON:0000179;5.47e-28;15!UBERON:0000463;5.47e-28;15!UBERON:0007100;8.89e-16;25!UBERON:0002390;3.41e-11;32!UBERON:0000948;2.16e-09;22!UBERON:0003296;7.96e-09;4!UBERON:0010133;7.96e-09;4!UBERON:0001905;1.74e-08;2!UBERON:0002757;1.74e-08;2!UBERON:0010134;1.74e-08;2!UBERON:0005408;1.74e-08;2!UBERON:0001899;1.74e-08;2!UBERON:0000341;1.97e-08;2!UBERON:0005090;3.06e-08;2!UBERON:0001630;3.06e-08;2!UBERON:0002193;1.21e-07;42!UBERON:0004535;5.26e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.13e-28,15;UBERON:0000179,7.13e-28,15;UBERON:0000463,7.13e-28,15;UBERON:0001009,2.58e-23,112;UBERON:0004535,9.28e-19,109;UBERON:0007023,4.97e-17,114;UBERON:0007100,1.98e-14,27;UBERON:0003081,4.02e-10,203;UBERON:0003296,8.29e-09,4;UBERON:0010133,8.29e-09,4;UBERON:0003103,1.12e-08,68;UBERON:0000948,1.69e-08,24;UBERON:0005498,1.69e-08,24;UBERON:0004140,1.69e-08,24;UBERON:0009881,1.69e-08,24;UBERON:0004141,1.69e-08,24;UBERON:0003084,1.69e-08,24;UBERON:0007005,1.69e-08,24;UBERON:0004139,1.69e-08,24;UBERON:0004291,1.69e-08,24;UBERON:0001905,1.74e-08,2;UBERON:0002757,1.74e-08,2;UBERON:0010134,1.74e-08,2;UBERON:0005408,1.74e-08,2;UBERON:0001899,1.74e-08,2;UBERON:0000341,1.94e-08,2;UBERON:0005090,3.01e-08,2;UBERON:0001630,3.01e-08,2;UBERON:0004872,3.40e-08,83;UBERON:0000926,9.33e-07,315;UBERON:0004120,9.33e-07,315;UBERON:0006603,9.33e-07,315 | |||
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| ||
|short_description=p2@FRMD3 | |||
}} | }} |
Latest revision as of 00:01, 18 September 2015
Short description: | p2@FRMD3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FRMD3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 13bp_to_ENST00000328788, NM_001244962, uc004amq.1_5end |
EntrezGene: | FRMD3 |
HGNC: | 24125 |
UniProt: | A2A2Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 7.13e-28 | 15 |
haemolymphatic fluid | 7.13e-28 | 15 |
organism substance | 7.13e-28 | 15 |
circulatory system | 2.58e-23 | 112 |
cardiovascular system | 9.28e-19 | 109 |
adult organism | 4.97e-17 | 114 |
primary circulatory organ | 1.98e-14 | 27 |
lateral plate mesoderm | 4.02e-10 | 203 |
gland of diencephalon | 8.29e-09 | 4 |
neuroendocrine gland | 8.29e-09 | 4 |
compound organ | 1.12e-08 | 68 |
heart | 1.69e-08 | 24 |
primitive heart tube | 1.69e-08 | 24 |
primary heart field | 1.69e-08 | 24 |
anterior lateral plate mesoderm | 1.69e-08 | 24 |
heart tube | 1.69e-08 | 24 |
heart primordium | 1.69e-08 | 24 |
cardiac mesoderm | 1.69e-08 | 24 |
cardiogenic plate | 1.69e-08 | 24 |
heart rudiment | 1.69e-08 | 24 |
pineal body | 1.74e-08 | 2 |
regional part of epithalamus | 1.74e-08 | 2 |
secretory circumventricular organ | 1.74e-08 | 2 |
circumventricular organ | 1.74e-08 | 2 |
epithalamus | 1.74e-08 | 2 |
throat | 1.94e-08 | 2 |
muscle structure | 3.01e-08 | 2 |
muscle organ | 3.01e-08 | 2 |
splanchnic layer of lateral plate mesoderm | 3.40e-08 | 83 |
mesoderm | 9.33e-07 | 315 |
mesoderm-derived structure | 9.33e-07 | 315 |
presumptive mesoderm | 9.33e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.87e-09 | 2 |
melanoma | 8.77e-08 | 2 |