FFCP PHASE1:Hg19::chrX:108780062..108780097,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:108780062..108780097,+ to FFCP PHASE1:Hg19::chrX:108780062..108780097,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55916 | |EntrezGene=55916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18151 | |HGNC=18151 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPJ8 | |UniProt=Q9NPJ8 | ||
|association_with_transcript=0bp_to_uc004eof.1_5end | |||
|cluster_id=chrX:108780062..108780097,+ | |||
|description=CAGE_peak_2_at_NXT2_5end | |||
|id=chrX:108780062..108780097,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.65e-20!172;CL:0000566!2.65e-20!172;CL:0002032!6.77e-19!165;CL:0000837!6.77e-19!165;CL:0002031!2.08e-17!124;CL:0000988!2.25e-17!182;CL:0002087!1.73e-16!119;CL:0000738!2.50e-16!140;CL:0000945!4.07e-10!24;CL:0000826!4.07e-10!24;CL:0000542!8.12e-10!53;CL:0000051!8.12e-10!53;CL:0000763!9.34e-10!112;CL:0000049!9.34e-10!112;CL:0000838!2.16e-09!52;CL:0000063!3.60e-09!578;CL:0002009!5.72e-09!65;CL:0000134!2.55e-08!358;CL:0002194!4.08e-08!63;CL:0000576!4.08e-08!63;CL:0000040!4.08e-08!63;CL:0000559!4.08e-08!63;CL:0000839!6.01e-08!70;CL:0000557!2.16e-07!71;CL:0002320!3.55e-07!365;CL:0000219!6.06e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.19e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.23e-20,168;CL:0002032,1.65e-18,161;CL:0000837,1.65e-18,161;CL:0000988,7.61e-18,177;CL:0002031,2.15e-16,120;CL:0000738,1.11e-15,136;CL:0002087,1.72e-15,115;CL:0000945,2.53e-10,24;CL:0000826,2.53e-10,24;CL:0000542,1.08e-09,53;CL:0000051,1.08e-09,53;CL:0000763,1.61e-09,108;CL:0000049,1.61e-09,108;CL:0000838,2.91e-09,52;CL:0000134,1.44e-08,354;CL:0002009,3.43e-08,61;CL:0002320,2.04e-07,361;CL:0002194,2.41e-07,59;CL:0000576,2.41e-07,59;CL:0000040,2.41e-07,59;CL:0000559,2.41e-07,59;CL:0000839,3.47e-07,66;CL:0000219,5.65e-07,386;CL:0000557,9.68e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.27e-12!235;DOID:14566!3.61e-11!239;DOID:2531!1.53e-09!51;DOID:0060083!1.53e-09!51;DOID:305!5.97e-07!106;DOID:0050686!6.98e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.72e-12,235;DOID:14566,5.29e-11,239;DOID:2531,1.02e-09,51;DOID:0060083,1.02e-09,51;DOID:305,6.22e-07,106;DOID:0050686,6.82e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.34e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.01e-07;9!UBERON:0001557;2.01e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.95e-07,9;UBERON:0002384,6.27e-07,371 | |||
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| ||
|short_description=p2@NXT2 | |||
}} | }} |
Latest revision as of 00:19, 19 September 2015
Short description: | p2@NXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NXT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc004eof.1_5end |
EntrezGene: | NXT2 |
HGNC: | 18151 |
UniProt: | Q9NPJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.23e-20 | 168 |
hematopoietic oligopotent progenitor cell | 1.65e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-18 | 161 |
hematopoietic cell | 7.61e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 2.15e-16 | 120 |
leukocyte | 1.11e-15 | 136 |
nongranular leukocyte | 1.72e-15 | 115 |
lymphocyte of B lineage | 2.53e-10 | 24 |
pro-B cell | 2.53e-10 | 24 |
lymphocyte | 1.08e-09 | 53 |
common lymphoid progenitor | 1.08e-09 | 53 |
myeloid cell | 1.61e-09 | 108 |
common myeloid progenitor | 1.61e-09 | 108 |
lymphoid lineage restricted progenitor cell | 2.91e-09 | 52 |
mesenchymal cell | 1.44e-08 | 354 |
macrophage dendritic cell progenitor | 3.43e-08 | 61 |
connective tissue cell | 2.04e-07 | 361 |
monopoietic cell | 2.41e-07 | 59 |
monocyte | 2.41e-07 | 59 |
monoblast | 2.41e-07 | 59 |
promonocyte | 2.41e-07 | 59 |
myeloid lineage restricted progenitor cell | 3.47e-07 | 66 |
motile cell | 5.65e-07 | 386 |
granulocyte monocyte progenitor cell | 9.68e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.95e-07 | 9 |
connective tissue | 6.27e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.72e-12 | 235 |
disease of cellular proliferation | 5.29e-11 | 239 |
hematologic cancer | 1.02e-09 | 51 |
immune system cancer | 1.02e-09 | 51 |
carcinoma | 6.22e-07 | 106 |
organ system cancer | 6.82e-07 | 137 |