FFCP PHASE1:Mm9::chr10:19076364..19076371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=94222 | |EntrezGene=94222 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2542 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PFG8 | |UniProt=Q6PFG8 | ||
|association_with_transcript=0bp_to_ENSMUST00000053225_5end | |||
|cluster_id=chr10:19076364..19076371,+ | |||
|description=CAGE_peak_1_at_Olig3_5end | |||
|id=chr10:19076364..19076371,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.35e-24,23;CL:0000337,2.35e-24,23;CL:0002613,7.84e-19,3;CL:0002293,1.36e-18,3;CL:0002612,1.78e-18,3;CL:0000540,1.21e-16,33;CL:0000047,1.21e-16,33;CL:0000031,1.21e-16,33;CL:0000404,1.21e-16,33;CL:0000393,6.62e-14,39;CL:0000211,6.62e-14,39;CL:0002321,9.76e-13,70;CL:0002611,1.44e-12,2;CL:0002319,1.67e-12,43;CL:0000221,3.43e-12,44;CL:0000133,3.43e-12,44;CL:0000120,2.45e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.16e-09!6;UBERON:0005174!1.16e-09!6;UBERON:0001137!1.16e-09!6;UBERON:0001948!8.51e-09!5;UBERON:0002315!8.51e-09!5;UBERON:0002370!8.10e-08!23;UBERON:0000974!8.10e-08!23;UBERON:0004807!8.10e-08!23;UBERON:0005058!8.10e-08!23;UBERON:0003351!8.10e-08!23;UBERON:0009113!8.10e-08!23;UBERON:0003295!8.10e-08!23;UBERON:0009722!8.10e-08!23;UBERON:0005562!8.10e-08!23;UBERON:0007690!8.10e-08!23;UBERON:0006562!2.34e-07!24;UBERON:0003408!2.34e-07!24;UBERON:0001557!2.34e-07!24;UBERON:0001042!2.34e-07!24;UBERON:0008814!2.34e-07!24;UBERON:0009145!2.34e-07!24;UBERON:0003076!8.21e-07!12;UBERON:0003057!8.21e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.27e-29,5;UBERON:0002315,2.27e-29,5;UBERON:0002240,1.72e-24,6;UBERON:0005174,1.72e-24,6;UBERON:0001137,1.72e-24,6;UBERON:0002257,1.78e-18,3;UBERON:0002256,1.44e-12,2;UBERON:0003076,3.00e-12,12;UBERON:0003057,3.00e-12,12;UBERON:0000369,1.54e-11,5;UBERON:0002435,1.54e-11,5;UBERON:0000204,1.54e-11,5;UBERON:0010082,1.54e-11,5;UBERON:0002020,2.01e-10,34;UBERON:0002420,2.12e-07,8;UBERON:0007245,2.12e-07,8;UBERON:0010009,2.12e-07,8;UBERON:0010011,2.12e-07,8;UBERON:0000454,2.12e-07,8;UBERON:0000489,5.87e-07,21;UBERON:0001017,7.46e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,1.98781686856452,0.122490799214954,0,0,0,0,0,5.93488294785872,2.56165402086747,5.73004707612436,0,0,0,5.00868595305235,3.84403538157578,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56652954828636,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384341160854549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0.504832249740738,0,0.302478555410522,0.38983152295901,0.481059208201647,0.584384510907845,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,7.9916257639816,0.798049746802062,2.04880326904961,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,1.98781686856452,0.122490799214954,0,0,0,0,0,5.93488294785872,2.56165402086747,5.73004707612436,0,0,0,5.00868595305235,3.84403538157578,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56652954828636,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384341160854549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0.504832249740738,0,0.302478555410522,0.38983152295901,0.481059208201647,0.584384510907845,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,7.9916257639816,0.798049746802062,2.04880326904961,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p1@Olig3 | |||
}} | }} |
Latest revision as of 20:44, 25 September 2015
Short description: | p1@Olig3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Olig3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2542 |
Association with transcript: | 0bp_to_ENSMUST00000053225_5end |
EntrezGene: | Olig3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.35e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.35e-24 | 23 |
striatum neuron | 7.84e-19 | 3 |
epithelial cell of thymus | 1.36e-18 | 3 |
neuron of the ventral spinal cord | 1.78e-18 | 3 |
neuron | 1.21e-16 | 33 |
neuronal stem cell | 1.21e-16 | 33 |
neuroblast | 1.21e-16 | 33 |
electrically signaling cell | 1.21e-16 | 33 |
electrically responsive cell | 6.62e-14 | 39 |
electrically active cell | 6.62e-14 | 39 |
embryonic cell | 9.76e-13 | 70 |
neuron of the dorsal spinal cord | 1.44e-12 | 2 |
neural cell | 1.67e-12 | 43 |
ectodermal cell | 3.43e-12 | 44 |
neurectodermal cell | 3.43e-12 | 44 |
granule cell | 2.45e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 2.27e-29 | 5 |
gray matter of spinal cord | 2.27e-29 | 5 |
spinal cord | 1.72e-24 | 6 |
dorsal region element | 1.72e-24 | 6 |
dorsum | 1.72e-24 | 6 |
ventral horn of spinal cord | 1.78e-18 | 3 |
dorsal horn of spinal cord | 1.44e-12 | 2 |
posterior neural tube | 3.00e-12 | 12 |
chordal neural plate | 3.00e-12 | 12 |
corpus striatum | 1.54e-11 | 5 |
striatum | 1.54e-11 | 5 |
ventral part of telencephalon | 1.54e-11 | 5 |
future corpus striatum | 1.54e-11 | 5 |
gray matter | 2.01e-10 | 34 |
basal ganglion | 2.12e-07 | 8 |
nuclear complex of neuraxis | 2.12e-07 | 8 |
aggregate regional part of brain | 2.12e-07 | 8 |
collection of basal ganglia | 2.12e-07 | 8 |
cerebral subcortex | 2.12e-07 | 8 |
cavitated compound organ | 5.87e-07 | 21 |
central nervous system | 7.46e-07 | 73 |