FFCP PHASE1:Mm9::chr19:45649611..45649620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:45649611..45649620,+ | |||
|description=CAGE_peak_at_chr19:45649611..45649620,+ | |||
|id=chr19:45649611..45649620,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.66e-15!32;CL:0002032!6.66e-15!32;CL:0000037!6.66e-15!32;CL:0000566!6.66e-15!32;CL:0000837!6.66e-15!32;CL:0000838!4.71e-14!12;CL:0000791!9.00e-14!9;CL:0000789!9.00e-14!9;CL:0002420!9.00e-14!9;CL:0002419!9.00e-14!9;CL:0000790!9.00e-14!9;CL:0000084!3.82e-13!11;CL:0000827!3.82e-13!11;CL:0000542!9.43e-13!13;CL:0000051!9.43e-13!13;CL:0000624!3.37e-12!8;CL:0002031!6.20e-11!25;CL:0000738!4.25e-09!17;CL:0002087!4.25e-09!17;CL:0000893!5.01e-09!6;CL:0002489!5.01e-09!6;CL:0000898!5.01e-09!6;CL:0000809!5.01e-09!6;CL:0000810!5.01e-09!6;CL:0000895!5.01e-09!6;CL:0000808!5.01e-09!6;CL:0000894!5.01e-09!6;CL:0000806!5.01e-09!6;CL:0000807!5.01e-09!6;CL:0000805!5.01e-09!6;CL:0002425!5.01e-09!6;CL:0002436!5.01e-09!6;CL:0002427!5.01e-09!6;CL:0002428!5.01e-09!6;CL:0002429!5.01e-09!6;CL:0002433!5.01e-09!6;CL:0002431!5.01e-09!6;CL:0002432!5.01e-09!6;CL:0002320!1.11e-08!46;CL:0000134!1.11e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.25e-23,9;CL:0000789,8.25e-23,9;CL:0002420,8.25e-23,9;CL:0002419,8.25e-23,9;CL:0000790,8.25e-23,9;CL:0000084,1.08e-18,11;CL:0000827,1.08e-18,11;CL:0000838,3.80e-17,12;CL:0000624,8.01e-17,8;CL:0000542,7.75e-16,13;CL:0000051,7.75e-16,13;CL:0002031,1.91e-15,25;CL:0000738,3.95e-12,17;CL:0002087,3.95e-12,17;CL:0000988,5.40e-12,32;CL:0002032,5.40e-12,32;CL:0000037,5.40e-12,32;CL:0000837,5.40e-12,32;CL:0000815,1.73e-09,1;CL:0000792,1.73e-09,1;CL:0000625,2.52e-09,1;CL:0002320,3.19e-08,46;CL:0000134,3.19e-08,46;CL:0000219,6.15e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.03e-28!48;UBERON:0002390!3.97e-27!45;UBERON:0003061!3.97e-27!45;UBERON:0004177!1.90e-26!29;UBERON:0002370!2.81e-24!23;UBERON:0000974!2.81e-24!23;UBERON:0004807!2.81e-24!23;UBERON:0005058!2.81e-24!23;UBERON:0003351!2.81e-24!23;UBERON:0009113!2.81e-24!23;UBERON:0003295!2.81e-24!23;UBERON:0009722!2.81e-24!23;UBERON:0005562!2.81e-24!23;UBERON:0007690!2.81e-24!23;UBERON:0006562!5.24e-23!24;UBERON:0003408!5.24e-23!24;UBERON:0001557!5.24e-23!24;UBERON:0001042!5.24e-23!24;UBERON:0008814!5.24e-23!24;UBERON:0009145!5.24e-23!24;UBERON:0000072!9.13e-20!27;UBERON:0002405!6.60e-18!70;UBERON:0000065!1.10e-14!41;UBERON:0001004!3.53e-14!42;UBERON:0003081!4.62e-14!88;UBERON:0000063!7.06e-14!35;UBERON:0005057!3.46e-13!51;UBERON:0002384!1.11e-08!46;UBERON:0003929!1.60e-08!55;UBERON:0002368!3.93e-08!60;UBERON:0002530!6.45e-08!65;UBERON:0000490!7.64e-08!66;UBERON:0005911!1.10e-07!69;UBERON:0001041!8.64e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.17e-09,23;UBERON:0000974,7.17e-09,23;UBERON:0004807,7.17e-09,23;UBERON:0005058,7.17e-09,23;UBERON:0003351,7.17e-09,23;UBERON:0009113,7.17e-09,23;UBERON:0003295,7.17e-09,23;UBERON:0009722,7.17e-09,23;UBERON:0005562,7.17e-09,23;UBERON:0007690,7.17e-09,23;UBERON:0006562,1.68e-08,24;UBERON:0003408,1.68e-08,24;UBERON:0001557,1.68e-08,24;UBERON:0001042,1.68e-08,24;UBERON:0008814,1.68e-08,24;UBERON:0009145,1.68e-08,24;UBERON:0002390,2.42e-08,45;UBERON:0003061,2.42e-08,45;UBERON:0002384,3.19e-08,46;UBERON:0002193,8.55e-08,48;UBERON:0002405,8.55e-08,48;UBERON:0000072,1.48e-07,27;UBERON:0004177,4.95e-07,29;UBERON:0005057,4.95e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.140788722151667,0.234064526321993,0.34243593645101,0.558405112967355,2.22560948910567,3.05971408466491,0,0.202475267389826,0,0.788655413395594,1.09691546884591,1.27316895539409,0,0.198581902401771,0,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.565105371014073,0,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.405450430580328,0.513554785824136,1.29920822977795,0.358053391334963,0.79472541912506,0.961563596159751,0.590758108698309,0.908698049533329,1.143102099825,0.604957110821043,0.682205165178267,0.962118416403295,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.140788722151667,0.234064526321993,0.34243593645101,0.558405112967355,2.22560948910567,3.05971408466491,0,0.202475267389826,0,0.788655413395594,1.09691546884591,1.27316895539409,0,0.198581902401771,0,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.565105371014073,0,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.405450430580328,0.513554785824136,1.29920822977795,0.358053391334963,0.79472541912506,0.961563596159751,0.590758108698309,0.908698049533329,1.143102099825,0.604957110821043,0.682205165178267,0.962118416403295,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:45649611..45649620,+ | |||
}} | }} |
Latest revision as of 04:58, 4 August 2015
Short description: | p@chr19:45649611..45649620, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:45649611..45649620, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.25e-23 | 9 |
alpha-beta T cell | 8.25e-23 | 9 |
immature T cell | 8.25e-23 | 9 |
mature T cell | 8.25e-23 | 9 |
immature alpha-beta T cell | 8.25e-23 | 9 |
T cell | 1.08e-18 | 11 |
pro-T cell | 1.08e-18 | 11 |
lymphoid lineage restricted progenitor cell | 3.80e-17 | 12 |
CD4-positive, alpha-beta T cell | 8.01e-17 | 8 |
lymphocyte | 7.75e-16 | 13 |
common lymphoid progenitor | 7.75e-16 | 13 |
hematopoietic lineage restricted progenitor cell | 1.91e-15 | 25 |
leukocyte | 3.95e-12 | 17 |
nongranular leukocyte | 3.95e-12 | 17 |
hematopoietic cell | 5.40e-12 | 32 |
hematopoietic oligopotent progenitor cell | 5.40e-12 | 32 |
hematopoietic stem cell | 5.40e-12 | 32 |
hematopoietic multipotent progenitor cell | 5.40e-12 | 32 |
regulatory T cell | 1.73e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.73e-09 | 1 |
CD8-positive, alpha-beta T cell | 2.52e-09 | 1 |
connective tissue cell | 3.19e-08 | 46 |
mesenchymal cell | 3.19e-08 | 46 |
motile cell | 6.15e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.17e-09 | 23 |
neck | 7.17e-09 | 23 |
respiratory system epithelium | 7.17e-09 | 23 |
hemolymphoid system gland | 7.17e-09 | 23 |
pharyngeal epithelium | 7.17e-09 | 23 |
thymic region | 7.17e-09 | 23 |
pharyngeal gland | 7.17e-09 | 23 |
entire pharyngeal arch endoderm | 7.17e-09 | 23 |
thymus primordium | 7.17e-09 | 23 |
early pharyngeal endoderm | 7.17e-09 | 23 |
pharynx | 1.68e-08 | 24 |
gland of gut | 1.68e-08 | 24 |
upper respiratory tract | 1.68e-08 | 24 |
chordate pharynx | 1.68e-08 | 24 |
pharyngeal arch system | 1.68e-08 | 24 |
pharyngeal region of foregut | 1.68e-08 | 24 |
hematopoietic system | 2.42e-08 | 45 |
blood island | 2.42e-08 | 45 |
connective tissue | 3.19e-08 | 46 |
hemolymphoid system | 8.55e-08 | 48 |
immune system | 8.55e-08 | 48 |
segment of respiratory tract | 1.48e-07 | 27 |
hemopoietic organ | 4.95e-07 | 29 |
immune organ | 4.95e-07 | 29 |