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FFCP PHASE1:Mm9::chr19:6046104..6046113,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:6046104..6046113,+
|DHSsupport=NA
|short_description=p7@Syvn1
|DPIdataset=NA
|description=CAGE_peak_7_at_Syvn1_5end
|association_with_transcript=-462bp_to_ENSMUST00000138532,NM_028769,uc008ggm.2_5end
|EntrezGene=74126
|EntrezGene=74126
|HGNC=
|HGNC=
|MCL_coexpression_id=26
|TSSclassifier=NA
|UniProt=Q9DBY1
|UniProt=Q9DBY1
|association_with_transcript=-462bp_to_ENSMUST00000138532,NM_028769,uc008ggm.2_5end
|cluster_id=chr19:6046104..6046113,+
|description=CAGE_peak_7_at_Syvn1_5end
|id=chr19:6046104..6046113,+
|ontology_enrichment_celltype=CL:0000063!2.82e-09!66;CL:0000988!6.14e-09!32;CL:0002032!6.14e-09!32;CL:0000037!6.14e-09!32;CL:0000566!6.14e-09!32;CL:0000837!6.14e-09!32;CL:0000838!8.74e-08!12;CL:0000791!1.39e-07!9;CL:0000789!1.39e-07!9;CL:0002420!1.39e-07!9;CL:0002419!1.39e-07!9;CL:0000790!1.39e-07!9;CL:0000084!1.94e-07!11;CL:0000827!1.94e-07!11;CL:0002031!4.46e-07!25;CL:0002563!5.37e-07!9;CL:0002251!5.37e-07!9;CL:0000624!8.01e-07!8;CL:0000542!8.89e-07!13;CL:0000051!8.89e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000791,7.00e-24,9;CL:0000789,7.00e-24,9;CL:0002420,7.00e-24,9;CL:0002419,7.00e-24,9;CL:0000790,7.00e-24,9;CL:0000624,1.36e-20,8;CL:0000084,2.47e-19,11;CL:0000827,2.47e-19,11;CL:0000838,1.26e-17,12;CL:0000542,3.51e-16,13;CL:0000051,3.51e-16,13;CL:0000893,2.43e-14,6;CL:0002489,2.43e-14,6;CL:0000898,2.43e-14,6;CL:0000809,2.43e-14,6;CL:0000810,2.43e-14,6;CL:0000895,2.43e-14,6;CL:0000808,2.43e-14,6;CL:0000894,2.43e-14,6;CL:0000806,2.43e-14,6;CL:0000807,2.43e-14,6;CL:0000805,2.43e-14,6;CL:0002425,2.43e-14,6;CL:0002436,2.43e-14,6;CL:0002427,2.43e-14,6;CL:0002428,2.43e-14,6;CL:0002429,2.43e-14,6;CL:0002433,2.43e-14,6;CL:0002431,2.43e-14,6;CL:0002432,2.43e-14,6;CL:0000738,4.24e-12,17;CL:0002087,4.24e-12,17;CL:0002031,4.72e-10,25;CL:0002563,1.90e-09,9;CL:0002251,1.90e-09,9;CL:0000223,8.77e-08,20;CL:0002076,8.80e-08,15;CL:0000988,1.56e-07,32;CL:0002032,1.56e-07,32;CL:0000037,1.56e-07,32;CL:0000837,1.56e-07,32;CL:0002320,2.00e-07,46;CL:0000134,2.00e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!2.59e-08!15;UBERON:0004923!3.52e-08!24;UBERON:0001242!2.47e-07!13;UBERON:0000060!2.47e-07!13;UBERON:0001262!2.47e-07!13;UBERON:0004786!2.47e-07!13;UBERON:0003350!5.37e-07!9;UBERON:0004808!5.37e-07!9;UBERON:0001277!5.37e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.90e-09,9;UBERON:0004808,1.90e-09,9;UBERON:0001277,1.90e-09,9;UBERON:0003929,3.11e-08,55;UBERON:0000485,1.10e-07,11;UBERON:0000344,1.11e-07,15;UBERON:0002384,2.00e-07,46;UBERON:0010147,3.82e-07,2;UBERON:0003937,3.82e-07,2;UBERON:0005399,3.82e-07,2
|phase1_expression=0.320297694209588,1.74487703819681,0.909998478779072,1.51232105653415,1.50268718983904,0.671517087647559,0.467225281191051,2.06597317506522,1.54867594366833,0.468129052643987,2.73948749160808,1.35612670292072,1.36960583944965,1.57356724354195,0,0.202475267389826,0,0.788655413395594,0.548457734422955,0.84877930359606,0.17008658030214,0.198581902401771,0.261199789138935,0.47997726838022,1.14704640533585,0,0,0.430942465371778,0.380046838912748,0.252030129759931,0.221730510655305,2.54012269383853,0.61506478758457,0,1.1554064790051,0.831173226792462,2.04169356262369,0.418531630736908,0,0,1.76469446409304,0.683045484958446,0.485510353031154,0.503587271902309,0.709638518536602,0.734187008646726,0,0,0,0.388859798148567,0.279972843250725,0,0.503347818173209,1.45072428402269,2.01656279485478,0,0.573066879877513,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,10.7249860819621,1.72084775396277,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,0.22836775943812,0.776813650941515,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.718890747035522,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0.538192240565737,0,0.184753190166605,0.37898282354097,0,0,0.938760993154008,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0.54390568381871,0,0.551873492609465,0,0,0.163934945376675,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,3.98235415019888,0,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0.948110273807448,2.10837217149998,0,0.680879211507576,0,0.388076051348264,0.214337035031592,0.532020700926821,0,0,0.608929898229199,0.23467170806371,0.63549621259146,1.10264199027481,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0.683483523191411,0,0.555583582109135,0.376736914009382,1.0935538217682,0,1.35982743995084,1.6794174278839,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0,0.15241361331,0,0.194915761479505,0,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0.548783918618318,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.644613162144895,0,0,0
|phase1_expression=0.320297694209588,1.74487703819681,0.909998478779072,1.51232105653415,1.50268718983904,0.671517087647559,0.467225281191051,2.06597317506522,1.54867594366833,0.468129052643987,2.73948749160808,1.35612670292072,1.36960583944965,1.57356724354195,0,0.202475267389826,0,0.788655413395594,0.548457734422955,0.84877930359606,0.17008658030214,0.198581902401771,0.261199789138935,0.47997726838022,1.14704640533585,0,0,0.430942465371778,0.380046838912748,0.252030129759931,0.221730510655305,2.54012269383853,0.61506478758457,0,1.1554064790051,0.831173226792462,2.04169356262369,0.418531630736908,0,0,1.76469446409304,0.683045484958446,0.485510353031154,0.503587271902309,0.709638518536602,0.734187008646726,0,0,0,0.388859798148567,0.279972843250725,0,0.503347818173209,1.45072428402269,2.01656279485478,0,0.573066879877513,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,10.7249860819621,1.72084775396277,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,0.22836775943812,0.776813650941515,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.718890747035522,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0.538192240565737,0,0.184753190166605,0.37898282354097,0,0,0.938760993154008,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0.54390568381871,0,0.551873492609465,0,0,0.163934945376675,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,3.98235415019888,0,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0.948110273807448,2.10837217149998,0,0.680879211507576,0,0.388076051348264,0.214337035031592,0.532020700926821,0,0,0.608929898229199,0.23467170806371,0.63549621259146,1.10264199027481,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0.683483523191411,0,0.555583582109135,0.376736914009382,1.0935538217682,0,1.35982743995084,1.6794174278839,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0,0.15241361331,0,0.194915761479505,0,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0.548783918618318,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.644613162144895,0,0,0
|short_description=p7@Syvn1
}}
}}

Latest revision as of 02:16, 26 September 2015

Short description:p7@Syvn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Syvn1_5end
Coexpression cluster:MCL_coexpression_mm9:26
Association with transcript: -462bp_to_ENSMUST00000138532, NM_028769, uc008ggm.2_5end
EntrezGene:Syvn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Syvn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell7.00e-249
alpha-beta T cell7.00e-249
immature T cell7.00e-249
mature T cell7.00e-249
immature alpha-beta T cell7.00e-249
CD4-positive, alpha-beta T cell1.36e-208
T cell2.47e-1911
pro-T cell2.47e-1911
lymphoid lineage restricted progenitor cell1.26e-1712
lymphocyte3.51e-1613
common lymphoid progenitor3.51e-1613
thymocyte2.43e-146
double negative thymocyte2.43e-146
naive T cell2.43e-146
double-positive, alpha-beta thymocyte2.43e-146
CD4-positive, alpha-beta thymocyte2.43e-146
naive thymus-derived CD4-positive, alpha-beta T cell2.43e-146
DN4 thymocyte2.43e-146
DN1 thymic pro-T cell2.43e-146
DN2 thymocyte2.43e-146
DN3 thymocyte2.43e-146
immature single positive thymocyte2.43e-146
early T lineage precursor2.43e-146
mature CD4 single-positive thymocyte2.43e-146
resting double-positive thymocyte2.43e-146
double-positive blast2.43e-146
CD69-positive double-positive thymocyte2.43e-146
CD69-positive, CD4-positive single-positive thymocyte2.43e-146
CD4-positive, CD8-intermediate double-positive thymocyte2.43e-146
CD24-positive, CD4 single-positive thymocyte2.43e-146
leukocyte4.24e-1217
nongranular leukocyte4.24e-1217
hematopoietic lineage restricted progenitor cell4.72e-1025
intestinal epithelial cell1.90e-099
epithelial cell of alimentary canal1.90e-099
endodermal cell8.77e-0820
endo-epithelial cell8.80e-0815
hematopoietic cell1.56e-0732
hematopoietic oligopotent progenitor cell1.56e-0732
hematopoietic stem cell1.56e-0732
hematopoietic multipotent progenitor cell1.56e-0732
connective tissue cell2.00e-0746
mesenchymal cell2.00e-0746

Uber anatomy
Ontology termp-valuen
epithelium of mucosa1.90e-099
gastrointestinal system epithelium1.90e-099
intestinal epithelium1.90e-099
gut epithelium3.11e-0855
simple columnar epithelium1.10e-0711
mucosa1.11e-0715
connective tissue2.00e-0746
male accessory sex gland3.82e-072
sex gland3.82e-072
male reproductive gland3.82e-072
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