FFCP PHASE1:Mm9::chr2:18920015..18920022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q0N7 | |UniProt=E9Q0N7 | ||
|association_with_transcript=45bp_to_ENSMUST00000028069_5end | |||
|cluster_id=chr2:18920015..18920022,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000028069_5end | |||
|id=chr2:18920015..18920022,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.24e-13!11;CL:0000827!2.24e-13!11;CL:0000542!7.62e-13!13;CL:0000051!7.62e-13!13;CL:0000838!5.43e-12!12;CL:0000791!4.19e-11!9;CL:0000789!4.19e-11!9;CL:0002420!4.19e-11!9;CL:0002419!4.19e-11!9;CL:0000790!4.19e-11!9;CL:0000624!4.20e-10!8;CL:0000988!1.81e-09!32;CL:0002032!1.81e-09!32;CL:0000037!1.81e-09!32;CL:0000566!1.81e-09!32;CL:0000837!1.81e-09!32;CL:0000738!5.27e-09!17;CL:0002087!5.27e-09!17;CL:0000893!1.90e-07!6;CL:0002489!1.90e-07!6;CL:0000898!1.90e-07!6;CL:0000809!1.90e-07!6;CL:0000810!1.90e-07!6;CL:0000895!1.90e-07!6;CL:0000808!1.90e-07!6;CL:0000894!1.90e-07!6;CL:0000806!1.90e-07!6;CL:0000807!1.90e-07!6;CL:0000805!1.90e-07!6;CL:0002425!1.90e-07!6;CL:0002436!1.90e-07!6;CL:0002427!1.90e-07!6;CL:0002428!1.90e-07!6;CL:0002429!1.90e-07!6;CL:0002433!1.90e-07!6;CL:0002431!1.90e-07!6;CL:0002432!1.90e-07!6;CL:0002031!5.38e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.27e-15,8;CL:0000791,1.86e-13,9;CL:0000789,1.86e-13,9;CL:0002420,1.86e-13,9;CL:0002419,1.86e-13,9;CL:0000790,1.86e-13,9;CL:0000084,4.59e-11,11;CL:0000827,4.59e-11,11;CL:0000838,3.64e-10,12;CL:0000542,2.10e-09,13;CL:0000051,2.10e-09,13;CL:0000815,1.05e-08,1;CL:0000792,1.05e-08,1;CL:0000738,3.03e-07,17;CL:0002087,3.03e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.31e-14!23;UBERON:0000974!2.31e-14!23;UBERON:0004807!2.31e-14!23;UBERON:0005058!2.31e-14!23;UBERON:0003351!2.31e-14!23;UBERON:0009113!2.31e-14!23;UBERON:0003295!2.31e-14!23;UBERON:0009722!2.31e-14!23;UBERON:0005562!2.31e-14!23;UBERON:0007690!2.31e-14!23;UBERON:0006562!1.57e-13!24;UBERON:0003408!1.57e-13!24;UBERON:0001557!1.57e-13!24;UBERON:0001042!1.57e-13!24;UBERON:0008814!1.57e-13!24;UBERON:0009145!1.57e-13!24;UBERON:0004177!3.53e-13!29;UBERON:0000072!2.05e-11!27;UBERON:0002390!3.74e-10!45;UBERON:0003061!3.74e-10!45;UBERON:0002193!5.45e-10!48;UBERON:0000065!3.24e-09!41;UBERON:0001004!7.53e-09!42;UBERON:0000063!1.04e-08!35;UBERON:0005057!1.87e-07!51;UBERON:0002405!8.97e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.66e-25,23;UBERON:0000974,4.66e-25,23;UBERON:0004807,4.66e-25,23;UBERON:0005058,4.66e-25,23;UBERON:0003351,4.66e-25,23;UBERON:0009113,4.66e-25,23;UBERON:0003295,4.66e-25,23;UBERON:0009722,4.66e-25,23;UBERON:0005562,4.66e-25,23;UBERON:0007690,4.66e-25,23;UBERON:0006562,5.46e-24,24;UBERON:0003408,5.46e-24,24;UBERON:0001557,5.46e-24,24;UBERON:0001042,5.46e-24,24;UBERON:0008814,5.46e-24,24;UBERON:0009145,5.46e-24,24;UBERON:0000072,2.95e-21,27;UBERON:0004177,9.54e-20,29;UBERON:0005057,9.54e-20,29;UBERON:0000077,3.01e-16,35;UBERON:0007811,8.89e-16,36;UBERON:0000065,9.10e-14,41;UBERON:0001004,2.01e-13,42;UBERON:0000153,4.30e-13,43;UBERON:0002390,1.77e-12,45;UBERON:0003061,1.77e-12,45;UBERON:0002193,1.19e-11,48;UBERON:0002405,1.19e-11,48;UBERON:0003929,4.54e-10,55;UBERON:0002368,3.66e-09,60;UBERON:0002530,2.15e-08,65;UBERON:0000490,2.97e-08,66;UBERON:0005911,7.38e-08,69;UBERON:0000949,1.70e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0.171217968225505,0.159544317990673,1.71200729931206,1.13646523144697,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.340173160604279,0.794327609607082,0.522399578277871,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0.183546752161682,0,0,0,0,0,0,0,2.90144856804538,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0.341741761595705,0,0,0,0.27338845544205,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0,0,0,1.07416017400489,1.58945083825012,1.44234539423963,0.738447635872886,1.51449674922221,0.990688486514998,0.907435666231565,0.682205165178267,2.69393156592922,4.55819918508119,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0.171217968225505,0.159544317990673,1.71200729931206,1.13646523144697,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.340173160604279,0.794327609607082,0.522399578277871,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0.183546752161682,0,0,0,0,0,0,0,2.90144856804538,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0.341741761595705,0,0,0,0.27338845544205,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0,0,0,1.07416017400489,1.58945083825012,1.44234539423963,0.738447635872886,1.51449674922221,0.990688486514998,0.907435666231565,0.682205165178267,2.69393156592922,4.55819918508119,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@ENSMUST00000028069 | |||
}} | }} |
Latest revision as of 08:37, 26 September 2015
Short description: | p2@ENSMUST00000028069 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000028069_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 45bp_to_ENSMUST00000028069_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.27e-15 | 8 |
mature alpha-beta T cell | 1.86e-13 | 9 |
alpha-beta T cell | 1.86e-13 | 9 |
immature T cell | 1.86e-13 | 9 |
mature T cell | 1.86e-13 | 9 |
immature alpha-beta T cell | 1.86e-13 | 9 |
T cell | 4.59e-11 | 11 |
pro-T cell | 4.59e-11 | 11 |
lymphoid lineage restricted progenitor cell | 3.64e-10 | 12 |
lymphocyte | 2.10e-09 | 13 |
common lymphoid progenitor | 2.10e-09 | 13 |
regulatory T cell | 1.05e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.05e-08 | 1 |
leukocyte | 3.03e-07 | 17 |
nongranular leukocyte | 3.03e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.66e-25 | 23 |
neck | 4.66e-25 | 23 |
respiratory system epithelium | 4.66e-25 | 23 |
hemolymphoid system gland | 4.66e-25 | 23 |
pharyngeal epithelium | 4.66e-25 | 23 |
thymic region | 4.66e-25 | 23 |
pharyngeal gland | 4.66e-25 | 23 |
entire pharyngeal arch endoderm | 4.66e-25 | 23 |
thymus primordium | 4.66e-25 | 23 |
early pharyngeal endoderm | 4.66e-25 | 23 |
pharynx | 5.46e-24 | 24 |
gland of gut | 5.46e-24 | 24 |
upper respiratory tract | 5.46e-24 | 24 |
chordate pharynx | 5.46e-24 | 24 |
pharyngeal arch system | 5.46e-24 | 24 |
pharyngeal region of foregut | 5.46e-24 | 24 |
segment of respiratory tract | 2.95e-21 | 27 |
hemopoietic organ | 9.54e-20 | 29 |
immune organ | 9.54e-20 | 29 |
mixed endoderm/mesoderm-derived structure | 3.01e-16 | 35 |
craniocervical region | 8.89e-16 | 36 |
respiratory tract | 9.10e-14 | 41 |
respiratory system | 2.01e-13 | 42 |
anterior region of body | 4.30e-13 | 43 |
hematopoietic system | 1.77e-12 | 45 |
blood island | 1.77e-12 | 45 |
hemolymphoid system | 1.19e-11 | 48 |
immune system | 1.19e-11 | 48 |
gut epithelium | 4.54e-10 | 55 |
endocrine gland | 3.66e-09 | 60 |
gland | 2.15e-08 | 65 |
unilaminar epithelium | 2.97e-08 | 66 |
endo-epithelium | 7.38e-08 | 69 |
endocrine system | 1.70e-07 | 72 |