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FFCP PHASE1:Mm9::chr6:55631042..55631102,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:55631042..55631102,-
|DHSsupport=NA
|short_description=p1@Neurod6
|DPIdataset=NA
|description=CAGE_peak_1_at_Neurod6_5end
|association_with_transcript=154bp_to_ENSMUST00000044767,NM_009717,uc009cav.2_5end
|EntrezGene=11922
|EntrezGene=11922
|HGNC=
|HGNC=
|MCL_coexpression_id=76
|TSSclassifier=NA
|UniProt=P48986,Q3UN97,Q5M8T7
|UniProt=P48986,Q3UN97,Q5M8T7
|association_with_transcript=154bp_to_ENSMUST00000044767,NM_009717,uc009cav.2_5end
|cluster_id=chr6:55631042..55631102,-
|description=CAGE_peak_1_at_Neurod6_5end
|id=chr6:55631042..55631102,-
|ontology_enrichment_celltype=CL:0000117!1.07e-15!23;CL:0000337!1.07e-15!23;CL:0000540!4.89e-12!33;CL:0000047!4.89e-12!33;CL:0000031!4.89e-12!33;CL:0000404!4.89e-12!33;CL:0000393!7.71e-09!39;CL:0000211!7.71e-09!39;CL:0000221!1.51e-07!44;CL:0000133!1.51e-07!44;CL:0002609!1.61e-07!6;CL:0002319!2.92e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-18,23;CL:0000337,1.09e-18,23;CL:0000540,7.23e-13,33;CL:0000047,7.23e-13,33;CL:0000031,7.23e-13,33;CL:0000404,7.23e-13,33;CL:0000393,8.97e-10,39;CL:0000211,8.97e-10,39;CL:0002609,8.76e-09,6;CL:0002319,3.17e-08,43;CL:0000221,6.91e-08,44;CL:0000133,6.91e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.49e-24!34;UBERON:0001049!2.05e-22!52;UBERON:0005068!2.05e-22!52;UBERON:0006241!2.05e-22!52;UBERON:0007135!2.05e-22!52;UBERON:0001017!2.81e-21!73;UBERON:0005743!2.81e-21!73;UBERON:0002791!3.68e-21!29;UBERON:0003528!3.68e-21!29;UBERON:0001893!3.68e-21!29;UBERON:0000955!6.36e-21!50;UBERON:0006238!6.36e-21!50;UBERON:0002616!1.84e-20!49;UBERON:0000073!3.35e-20!75;UBERON:0001016!3.35e-20!75;UBERON:0003080!1.60e-18!40;UBERON:0002780!3.55e-18!39;UBERON:0001890!3.55e-18!39;UBERON:0006240!3.55e-18!39;UBERON:0000033!1.29e-17!63;UBERON:0000956!6.87e-17!21;UBERON:0001869!6.87e-17!21;UBERON:0000203!6.87e-17!21;UBERON:0002346!9.96e-17!71;UBERON:0003075!9.96e-17!71;UBERON:0007284!9.96e-17!71;UBERON:0003056!2.54e-15!49;UBERON:0002619!7.42e-13!17;UBERON:0004121!2.08e-12!102;UBERON:0000924!2.08e-12!102;UBERON:0006601!2.08e-12!102;UBERON:0002021!1.84e-10!10;UBERON:0000411!1.84e-10!10;UBERON:0001950!1.84e-10!10;UBERON:0007811!2.14e-09!86;UBERON:0000153!1.94e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.80e-29,34;UBERON:0003528,1.27e-25,29;UBERON:0002791,1.27e-25,29;UBERON:0001893,1.27e-25,29;UBERON:0000073,7.48e-25,54;UBERON:0001049,2.40e-23,52;UBERON:0005068,2.40e-23,52;UBERON:0006241,2.40e-23,52;UBERON:0007135,2.40e-23,52;UBERON:0001017,1.41e-21,73;UBERON:0001016,1.33e-20,75;UBERON:0000956,1.89e-20,21;UBERON:0001869,1.89e-20,21;UBERON:0000203,1.89e-20,21;UBERON:0000955,1.19e-19,47;UBERON:0006238,1.19e-19,47;UBERON:0002780,3.98e-19,39;UBERON:0001890,3.98e-19,39;UBERON:0006240,3.98e-19,39;UBERON:0002616,4.07e-19,46;UBERON:0002346,2.12e-18,64;UBERON:0003075,2.12e-18,64;UBERON:0007284,2.12e-18,64;UBERON:0003080,2.15e-18,40;UBERON:0002619,1.52e-15,17;UBERON:0010371,2.29e-15,73;UBERON:0003056,4.30e-14,49;UBERON:0004121,6.75e-14,95;UBERON:0000924,6.75e-14,95;UBERON:0006601,6.75e-14,95;UBERON:0002021,2.41e-12,10;UBERON:0000411,2.41e-12,10;UBERON:0001950,2.41e-12,10;UBERON:0010314,1.22e-09,92
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,11.1088105647127,8.23980824558033,0,0,0,0,0,0,0,622.137673850866,662.474139393606,595.219640624411,10.8547374073445,13.693849539,220.483438586917,176.64320308661,143.398130711163,2.20231761998777,16.4716666129892,21.9657342556428,10.4190167306853,13.631658896759,36.4639359389732,3.62937898701795,2.25105044012672,12.3766580699216,20.0347438122094,23.0642122894547,36.1614924901083,0,0,0,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,0.704217098883403,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90508151931177,4.1889341362691,0,0,0,0,0.748953197024114,12.8100168789215,40.7120100845681,101.687227312482,73.9017671684655,5.61027720310812,13.9527486238272,0.203678727700633,0,0,0,0,0,0,0,0.0680364991513279,0.512454881139399,1.21812241927647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,269.171134162083,447.22344540037,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,4.57125577709592,0,0,0.631016438832513,1.56175497718655,0.430846795465598,0,0,0,0,0,0,5.46246237917072,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.713475270408282,0.658196082408484,0,0,0,0,0,0,0,0,0,0.291480836629851,3.70850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.3242653368576,93.9063482474641,88.7988045831065,53.6181928912305,67.1380869375229,52.1221789198893,79.6526550273531,72.9520349223237,79.2999215722358,59.5424358514593,0.207574695168353,10.3746467084268,20.6587662962502,24.796885140966,27.0400979790097,21.3258469802016,28.4475811586067,21.8397160673228,27.2781328153043,29.0601793528367,25.6014092889142,26.0304351112785,29.4034333455431,26.6344634004256,29.406960105274,21.9095097990214,20.04798838846,21.2200142510076,21.8405527425753,24.8766175027131,26.7438016860624,21.4745725452798,24.0820551846794,25.5809693272898,26.9152827987846,24.9613093280446,21.9513567447327,20.2563677807139,25.2595651753303,21.8845485946518,20.8797631898546,18.8143561337326,16.3692417267876,21.5362209248493,19.097754487133,44.7160934508923,16.1412809827332,16.545071161719,1.3390183244819,0.220591419119515,0.231867835620421
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,11.1088105647127,8.23980824558033,0,0,0,0,0,0,0,622.137673850866,662.474139393606,595.219640624411,10.8547374073445,13.693849539,220.483438586917,176.64320308661,143.398130711163,2.20231761998777,16.4716666129892,21.9657342556428,10.4190167306853,13.631658896759,36.4639359389732,3.62937898701795,2.25105044012672,12.3766580699216,20.0347438122094,23.0642122894547,36.1614924901083,0,0,0,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,0.704217098883403,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90508151931177,4.1889341362691,0,0,0,0,0.748953197024114,12.8100168789215,40.7120100845681,101.687227312482,73.9017671684655,5.61027720310812,13.9527486238272,0.203678727700633,0,0,0,0,0,0,0,0.0680364991513279,0.512454881139399,1.21812241927647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,269.171134162083,447.22344540037,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,4.57125577709592,0,0,0.631016438832513,1.56175497718655,0.430846795465598,0,0,0,0,0,0,5.46246237917072,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.713475270408282,0.658196082408484,0,0,0,0,0,0,0,0,0,0.291480836629851,3.70850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.3242653368576,93.9063482474641,88.7988045831065,53.6181928912305,67.1380869375229,52.1221789198893,79.6526550273531,72.9520349223237,79.2999215722358,59.5424358514593,0.207574695168353,10.3746467084268,20.6587662962502,24.796885140966,27.0400979790097,21.3258469802016,28.4475811586067,21.8397160673228,27.2781328153043,29.0601793528367,25.6014092889142,26.0304351112785,29.4034333455431,26.6344634004256,29.406960105274,21.9095097990214,20.04798838846,21.2200142510076,21.8405527425753,24.8766175027131,26.7438016860624,21.4745725452798,24.0820551846794,25.5809693272898,26.9152827987846,24.9613093280446,21.9513567447327,20.2563677807139,25.2595651753303,21.8845485946518,20.8797631898546,18.8143561337326,16.3692417267876,21.5362209248493,19.097754487133,44.7160934508923,16.1412809827332,16.545071161719,1.3390183244819,0.220591419119515,0.231867835620421
|short_description=p1@Neurod6
}}
}}

Latest revision as of 14:19, 1 October 2015

Short description:p1@Neurod6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Neurod6_5end
Coexpression cluster:MCL_coexpression_mm9:76
Association with transcript: 154bp_to_ENSMUST00000044767, NM_009717, uc009cav.2_5end
EntrezGene:Neurod6
Link to Zenbu:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data