Personal tools

FFCP PHASE1:Mm9::chr9:63869834..63869849,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:63869834..63869849,-
|DHSsupport=NA
|short_description=p5@Smad6
|DPIdataset=NA
|description=CAGE_peak_5_at_Smad6_5end
|association_with_transcript=16bp_to_ENSMUST00000041029,NM_008542,uc009qbk.2_5end
|EntrezGene=17130
|EntrezGene=17130
|HGNC=
|HGNC=
|MCL_coexpression_id=1855
|TSSclassifier=NA
|UniProt=O35182
|UniProt=O35182
|association_with_transcript=16bp_to_ENSMUST00000041029,NM_008542,uc009qbk.2_5end
|cluster_id=chr9:63869834..63869849,-
|description=CAGE_peak_5_at_Smad6_5end
|id=chr9:63869834..63869849,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!7.22e-12!23;UBERON:0001009!7.22e-12!23;UBERON:0007100!1.03e-09!18;UBERON:0000948!1.03e-09!18;UBERON:0005498!1.03e-09!18;UBERON:0004140!1.03e-09!18;UBERON:0009881!1.03e-09!18;UBERON:0004141!1.03e-09!18;UBERON:0003084!1.03e-09!18;UBERON:0007005!1.03e-09!18;UBERON:0004139!1.03e-09!18;UBERON:0004291!1.03e-09!18;UBERON:0003914!1.67e-09!47;UBERON:0004872!8.27e-09!33;UBERON:0002048!4.07e-08!14;UBERON:0000117!4.07e-08!14;UBERON:0000171!4.07e-08!14;UBERON:0000170!4.07e-08!14;UBERON:0005597!4.07e-08!14;UBERON:0000118!4.07e-08!14;UBERON:0005153!2.13e-07!17;UBERON:0005178!2.75e-07!17;UBERON:0005181!2.75e-07!17;UBERON:0002224!2.75e-07!17;UBERON:0000915!2.75e-07!17;UBERON:0008947!2.75e-07!17;UBERON:0003258!2.75e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.26e-16,23;UBERON:0001009,4.26e-16,23;UBERON:0007100,4.62e-13,18;UBERON:0000948,4.62e-13,18;UBERON:0005498,4.62e-13,18;UBERON:0004140,4.62e-13,18;UBERON:0009881,4.62e-13,18;UBERON:0004141,4.62e-13,18;UBERON:0003084,4.62e-13,18;UBERON:0007005,4.62e-13,18;UBERON:0004139,4.62e-13,18;UBERON:0004291,4.62e-13,18;UBERON:0004872,2.07e-11,33;UBERON:0002048,8.65e-10,14;UBERON:0000117,8.65e-10,14;UBERON:0000171,8.65e-10,14;UBERON:0000170,8.65e-10,14;UBERON:0005597,8.65e-10,14;UBERON:0000118,8.65e-10,14;UBERON:0003914,9.37e-09,47;UBERON:0005153,1.19e-08,17;UBERON:0005178,4.64e-08,17;UBERON:0005181,4.64e-08,17;UBERON:0002224,4.64e-08,17;UBERON:0000915,4.64e-08,17;UBERON:0008947,4.64e-08,17;UBERON:0003258,4.64e-08,17;UBERON:0001048,8.45e-07,134
|phase1_expression=1.12104192973356,2.09385244583617,2.27499619694768,1.20985684522732,1.00179145989269,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0.646413698057667,0.760093677825496,1.00812051903972,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,2.01434908760924,1.31790010585369,1.46837401729345,3.12956537739216,0.218025156380447,0.659058548203415,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,4.3734104126111,9.45560351797897,12.3761302146586,0,0,0,2.37191172448392,3.55717918444456,0.449949858640699,0,0.7104801149461,0.898800331555214,0,0.518448061542388,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0.605809546665472,0.0755715601067855,6.95674772884027,0.860423876981386,0.679971333707751,1.61910957491345,0,0.896053774194671,0.702222100658759,1.87473354835864,1.55871602761721,1.41335829804136,0.704217098883403,6.41632387071589,12.7402619853323,35.5533351576666,0.432982082022428,0.760079596425296,1.01104889002957,1.02765491747154,0,0.445326417194474,2.25530924795977,0.608930956624282,0.461230994512117,0,0.823120949949934,0.502666365318702,0.741584903203122,2.4581890676385,0,0.808834249737046,1.54589062922275,2.90925151881133,0,0.292780797011547,0,1.27728527604296,0,0,0,0.149790639404823,0,0,0.521472960576829,0.255715457330331,0,0.162241263067758,0.407357455401265,1.24406970610093,0.758168275301024,0.420883711772948,0.390361328888111,0.689706313300419,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.374806898238915,0,1.07783996466421,1.70195472151037,2.11141348996739,0.657587197282725,1.11218899690239,0,1.02891068203972,1.79130840136644,0,0,0,7.45652781127807,3.28336483973535,4.32148947506436,3.55117103377815,2.75469924446365,4.01094493507183,1.39520366850245,4.82892122519315,1.16765342367169,1.48103864922132,1.47750717671186,1.4592385718254,1.02339991197733,1.97595103761946,2.41571553768669,0.420579897128254,0.102904612379284,1.65209391491899,1.05780226665418,1.06644125267617,1.62565670302307,1.80414445850931,1.4117846723634,0.444756087689741,1.71203063501303,2.84717436926707,0.329397909448022,0.754005626400808,0.795825888164603,1.16978452271472,0,1.51296634912286,0.199141273254367,0.948339504765408,1.02823661348756,2.25415471346161,1.22190796707189,0.581857461502877,1.05203729835478,1.20149420536089,0.885660887877613,0.784993639206874,0.616985819609003,1.1858105083486,0.83422552858047,0.589676985339609,0.449724224769707,1.01430060694251,0.241177159752417,1.2731292589071,0.575392274901621,0.810676133875177,0.823684239564244,0,0.744281895337007,1.87222603868736,1.76805214562978,1.07638448113147,0.964887042726734,8.12914036733061,2.27389694124582,0.977789858652155,1.69745085775188,1.40814148973101,2.51259386162724,1.19021820443007,4.09780660501378,3.62560831444239,3.76489972402917,5.26200736569707,6.55453258862952,5.18054945597687,6.07526046042349,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.117211686592203,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0,0.567760340833074,2.49291845134157,0.651547837414304,0.494910368917606,2.65490276679926,0.485561272309963,0.302323556964751,0.754420319023592,0.590603785761546,0.922305443831782,1.03371317267288,0.363533729477506,1.06949213515416,0.316036757935816,0,0,1.02131881726136,1.08036656418786,1.16422815404479,1.28602221018955,0.354680467284547,0.178368817602071,1.81003922662333,0.608929898229199,0.938686832254841,1.0591603543191,2.42581237860458,0.98931751764888,0.161464426695906,0.482503399425247,1.3130957840345,0.984845398470368,0.874442509889552,0,0,1.857481811669,0.925972636848558,0.188368457004691,0.136694227721025,0,0.169978429993855,0.559805809294632,0,0,1.26534397432454,1.42323626988794,0.756037385752609,0.627264888043406,2.40198820120795,0.944050424693745,0.991841468704031,2.09404753587224,0.777689839750757,0.621339313086926,0,4.33597983527538,1.65458490457098,1.16670713006429,0.904118764344118,0.675824501963113,0.938857909166032,0.651021924219751,0.314578033277133,0,0.576060012515731,0,0.405450430580328,1.02710957164827,0.129920822977795,0.537080087002444,0.198681354781265,0,0.147689527174577,0.201932899896295,0.15241361331,0,0,0,0,0.453460767230423,0.221985953374065,2.33256027184637,0.839423081820392,1.54551675225752,0,0.915758121336325,0.643105137237198,1.50471631210609,0,0,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0.798049746802062,0.853668028770671,0.729320151204882,0.628839487883947,0.735374033800057,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,1.47257850531199,0.861532034334199,0.952587382566147,1.0429589335037,0.964546102318525,0.824171801606613,1.47198920134397,0.342869252385415,1.59728225543404,0.953744759789284,1.45346416632329,0.564656282491984,0.592302255241736,1.46342378298218,1.31534855718921,1.08643291076689,2.24456908663095,1.06771516311757,1.18205378850676,1.63692417267876,0.929621047115796,0.964533054905707,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,1.32354851471709,0.463735671240843
|phase1_expression=1.12104192973356,2.09385244583617,2.27499619694768,1.20985684522732,1.00179145989269,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0.646413698057667,0.760093677825496,1.00812051903972,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,2.01434908760924,1.31790010585369,1.46837401729345,3.12956537739216,0.218025156380447,0.659058548203415,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,4.3734104126111,9.45560351797897,12.3761302146586,0,0,0,2.37191172448392,3.55717918444456,0.449949858640699,0,0.7104801149461,0.898800331555214,0,0.518448061542388,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0.605809546665472,0.0755715601067855,6.95674772884027,0.860423876981386,0.679971333707751,1.61910957491345,0,0.896053774194671,0.702222100658759,1.87473354835864,1.55871602761721,1.41335829804136,0.704217098883403,6.41632387071589,12.7402619853323,35.5533351576666,0.432982082022428,0.760079596425296,1.01104889002957,1.02765491747154,0,0.445326417194474,2.25530924795977,0.608930956624282,0.461230994512117,0,0.823120949949934,0.502666365318702,0.741584903203122,2.4581890676385,0,0.808834249737046,1.54589062922275,2.90925151881133,0,0.292780797011547,0,1.27728527604296,0,0,0,0.149790639404823,0,0,0.521472960576829,0.255715457330331,0,0.162241263067758,0.407357455401265,1.24406970610093,0.758168275301024,0.420883711772948,0.390361328888111,0.689706313300419,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.374806898238915,0,1.07783996466421,1.70195472151037,2.11141348996739,0.657587197282725,1.11218899690239,0,1.02891068203972,1.79130840136644,0,0,0,7.45652781127807,3.28336483973535,4.32148947506436,3.55117103377815,2.75469924446365,4.01094493507183,1.39520366850245,4.82892122519315,1.16765342367169,1.48103864922132,1.47750717671186,1.4592385718254,1.02339991197733,1.97595103761946,2.41571553768669,0.420579897128254,0.102904612379284,1.65209391491899,1.05780226665418,1.06644125267617,1.62565670302307,1.80414445850931,1.4117846723634,0.444756087689741,1.71203063501303,2.84717436926707,0.329397909448022,0.754005626400808,0.795825888164603,1.16978452271472,0,1.51296634912286,0.199141273254367,0.948339504765408,1.02823661348756,2.25415471346161,1.22190796707189,0.581857461502877,1.05203729835478,1.20149420536089,0.885660887877613,0.784993639206874,0.616985819609003,1.1858105083486,0.83422552858047,0.589676985339609,0.449724224769707,1.01430060694251,0.241177159752417,1.2731292589071,0.575392274901621,0.810676133875177,0.823684239564244,0,0.744281895337007,1.87222603868736,1.76805214562978,1.07638448113147,0.964887042726734,8.12914036733061,2.27389694124582,0.977789858652155,1.69745085775188,1.40814148973101,2.51259386162724,1.19021820443007,4.09780660501378,3.62560831444239,3.76489972402917,5.26200736569707,6.55453258862952,5.18054945597687,6.07526046042349,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.117211686592203,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0,0.567760340833074,2.49291845134157,0.651547837414304,0.494910368917606,2.65490276679926,0.485561272309963,0.302323556964751,0.754420319023592,0.590603785761546,0.922305443831782,1.03371317267288,0.363533729477506,1.06949213515416,0.316036757935816,0,0,1.02131881726136,1.08036656418786,1.16422815404479,1.28602221018955,0.354680467284547,0.178368817602071,1.81003922662333,0.608929898229199,0.938686832254841,1.0591603543191,2.42581237860458,0.98931751764888,0.161464426695906,0.482503399425247,1.3130957840345,0.984845398470368,0.874442509889552,0,0,1.857481811669,0.925972636848558,0.188368457004691,0.136694227721025,0,0.169978429993855,0.559805809294632,0,0,1.26534397432454,1.42323626988794,0.756037385752609,0.627264888043406,2.40198820120795,0.944050424693745,0.991841468704031,2.09404753587224,0.777689839750757,0.621339313086926,0,4.33597983527538,1.65458490457098,1.16670713006429,0.904118764344118,0.675824501963113,0.938857909166032,0.651021924219751,0.314578033277133,0,0.576060012515731,0,0.405450430580328,1.02710957164827,0.129920822977795,0.537080087002444,0.198681354781265,0,0.147689527174577,0.201932899896295,0.15241361331,0,0,0,0,0.453460767230423,0.221985953374065,2.33256027184637,0.839423081820392,1.54551675225752,0,0.915758121336325,0.643105137237198,1.50471631210609,0,0,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0.798049746802062,0.853668028770671,0.729320151204882,0.628839487883947,0.735374033800057,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,1.47257850531199,0.861532034334199,0.952587382566147,1.0429589335037,0.964546102318525,0.824171801606613,1.47198920134397,0.342869252385415,1.59728225543404,0.953744759789284,1.45346416632329,0.564656282491984,0.592302255241736,1.46342378298218,1.31534855718921,1.08643291076689,2.24456908663095,1.06771516311757,1.18205378850676,1.63692417267876,0.929621047115796,0.964533054905707,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,1.32354851471709,0.463735671240843
|short_description=p5@Smad6
}}
}}

Latest revision as of 23:47, 26 September 2015

Short description:p5@Smad6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Smad6_5end
Coexpression cluster:MCL_coexpression_mm9:1855
Association with transcript: 16bp_to_ENSMUST00000041029, NM_008542, uc009qbk.2_5end
EntrezGene:Smad6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Smad6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E97.46
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B18.13
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system4.26e-1623
circulatory system4.26e-1623
primary circulatory organ4.62e-1318
heart4.62e-1318
primitive heart tube4.62e-1318
primary heart field4.62e-1318
anterior lateral plate mesoderm4.62e-1318
heart tube4.62e-1318
heart primordium4.62e-1318
cardiac mesoderm4.62e-1318
cardiogenic plate4.62e-1318
heart rudiment4.62e-1318
splanchnic layer of lateral plate mesoderm2.07e-1133
lung8.65e-1014
respiratory tube8.65e-1014
respiration organ8.65e-1014
pair of lungs8.65e-1014
lung primordium8.65e-1014
lung bud8.65e-1014
epithelial tube9.37e-0947
epithelial bud1.19e-0817
thoracic cavity element4.64e-0817
thoracic segment organ4.64e-0817
thoracic cavity4.64e-0817
thoracic segment of trunk4.64e-0817
respiratory primordium4.64e-0817
endoderm of foregut4.64e-0817
primordium8.45e-07134
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:63869834..63869849,-&oldid=4281077"