FFCP PHASE1:Mm9::chr10:79457763..79457780,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=481 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79457763..79457780,+ | |||
|description=CAGE_peak_at_chr10:79457763..79457780,+ | |description=CAGE_peak_at_chr10:79457763..79457780,+ | ||
|id=chr10:79457763..79457780,+ | |id=chr10:79457763..79457780,+ | ||
|ontology_enrichment_celltype=CL:0000219!1.44e-07!54;CL:0000355!3.05e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,5.68e-15,9;CL:0000680,2.28e-13,6;CL:0000187,2.28e-13,6;CL:0000056,2.28e-13,6;CL:0002453,8.62e-12,8;CL:0000219,1.01e-11,54;CL:0000222,2.48e-11,7;CL:0000333,3.27e-09,10;CL:0000095,3.27e-09,10;CL:0000243,3.27e-09,10;CL:0000123,3.27e-09,10;CL:0000125,3.27e-09,10;CL:0000030,3.27e-09,10;CL:0000339,3.27e-09,10;CL:0000128,1.88e-08,6;CL:0000126,1.88e-08,6;CL:0000127,1.88e-08,6;CL:0002320,1.05e-07,46;CL:0000134,1.05e-07,46;CL:0000192,1.14e-07,3;CL:0000359,1.14e-07,3;CL:0002539,1.14e-07,3;CL:0000514,1.14e-07,3;CL:0000723,1.30e-07,91;CL:0000048,1.30e-07,91;CL:0002494,2.63e-07,3;CL:0000737,2.63e-07,3;CL:0000746,2.63e-07,3;CL:0000513,2.63e-07,3;CL:0000034,8.53e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.11e-08!193;UBERON:0004120!4.11e-08!193;UBERON:0006603!4.11e-08!193;UBERON:0001134!3.05e-07!9;UBERON:0002036!3.05e-07!9;UBERON:0002385!3.05e-07!9;UBERON:0000486!3.05e-07!9;UBERON:0001015!3.05e-07!9;UBERON:0004290!3.05e-07!9;UBERON:0003082!3.05e-07!9;UBERON:0000065!5.57e-07!41;UBERON:0003081!8.03e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.68e-15,9;UBERON:0002036,5.68e-15,9;UBERON:0002385,5.68e-15,9;UBERON:0000486,5.68e-15,9;UBERON:0007503,5.68e-15,9;UBERON:0001015,5.68e-15,9;UBERON:0002329,5.68e-15,9;UBERON:0003082,5.68e-15,9;UBERON:0003059,5.68e-15,9;UBERON:0007282,5.68e-15,9;UBERON:0004290,5.68e-15,9;UBERON:0009618,5.68e-15,9;UBERON:0000383,2.58e-13,10;UBERON:0007524,5.85e-12,11;UBERON:0003077,5.85e-12,11;UBERON:0007285,5.85e-12,11;UBERON:0002204,7.58e-12,32;UBERON:0002384,1.05e-07,46;UBERON:0001135,1.14e-07,3;UBERON:0004237,1.14e-07,3;UBERON:0004695,1.14e-07,3;UBERON:0002111,1.14e-07,3;UBERON:0004178,1.14e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,2.1950964985068,0.140788722151667,0,0.171217968225505,0,1.54080656938085,3.2345548895029,0.333109761815663,0.202475267389826,0.699561878128147,3.15462165358238,2.05671650408608,2.12194825899015,0.425216450755349,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,1.57057123192139,5.29408339227913,6.14740936462601,2.91306211818692,4.15459499319405,3.54819259268301,2.75320128242522,4.69434806608824,1.74420125104357,1.75748946187577,1.55543919259427,0.839918529752175,1.43752564364972,0.838913030288682,0.725362142011344,1.34437519656986,3.60163210450326,1.71920063963254,3.09403255366465,0,0,0.633831403506179,1.0165335962074,0.889294796111139,1.3498495759221,2.96659908770092,0.7104801149461,2.39680088414724,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.0755715601067855,0.579728977403356,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,2.04516387093669,6.75443611967459,1.41335829804136,0.14084341977668,2.56652954828636,2.54805239706646,0,1.29894624606728,3.04031838570118,1.51657333504435,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.904335843315735,0.117588707135705,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0.441683036920787,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.520481771850815,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0.51469581422943,0.284163499395593,0.414251545071004,0.938104239924385,0.540186184383045,0.23674473558521,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0,0,0,0.853153002140936,0.928946687441754,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.610953983535943,0.969762435838129,0.140271639780637,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,1.18821560042632,2.11221223459652,0.502518772325447,0.714130922658041,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,1.47476983244164,1.38147985492716,0.867894351489069,0,0,0,0,0,0,1.14754461763673,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0.283880170416537,0.534196811001766,0.325773918707152,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0,0.900305470156551,0,0.214337035031592,0.177340233642274,0.713475270408282,0,0.304464949114599,0,0.63549621259146,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0.740778109478847,0.376736914009382,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0,0,0.316335993581135,0,0.216010681643603,0.836353184057875,0.87345025498471,0,0.247960367176008,0,0.129614973291793,0,0,0,0.330916980914195,0,0.258319646955462,0.168956125490778,0.469428954583016,0.5208175393758,0.104859344425711,0.241584120826006,0,0.632022241256357,0.608175645870493,0.718976700153791,0.389762468933385,0.179026695667481,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.15241361331,0.403304740547362,0.487289403698762,0,0.350630706544707,0,0,0.179427713218951,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.518936737920883,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.715308569841963,0,0,0.0846146078916765,0.548783918618318,0.526139422875686,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,2.1950964985068,0.140788722151667,0,0.171217968225505,0,1.54080656938085,3.2345548895029,0.333109761815663,0.202475267389826,0.699561878128147,3.15462165358238,2.05671650408608,2.12194825899015,0.425216450755349,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,1.57057123192139,5.29408339227913,6.14740936462601,2.91306211818692,4.15459499319405,3.54819259268301,2.75320128242522,4.69434806608824,1.74420125104357,1.75748946187577,1.55543919259427,0.839918529752175,1.43752564364972,0.838913030288682,0.725362142011344,1.34437519656986,3.60163210450326,1.71920063963254,3.09403255366465,0,0,0.633831403506179,1.0165335962074,0.889294796111139,1.3498495759221,2.96659908770092,0.7104801149461,2.39680088414724,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.0755715601067855,0.579728977403356,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,2.04516387093669,6.75443611967459,1.41335829804136,0.14084341977668,2.56652954828636,2.54805239706646,0,1.29894624606728,3.04031838570118,1.51657333504435,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.904335843315735,0.117588707135705,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0.441683036920787,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.520481771850815,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0.51469581422943,0.284163499395593,0.414251545071004,0.938104239924385,0.540186184383045,0.23674473558521,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0,0,0,0.853153002140936,0.928946687441754,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.610953983535943,0.969762435838129,0.140271639780637,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,1.18821560042632,2.11221223459652,0.502518772325447,0.714130922658041,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,1.47476983244164,1.38147985492716,0.867894351489069,0,0,0,0,0,0,1.14754461763673,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0.283880170416537,0.534196811001766,0.325773918707152,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0,0.900305470156551,0,0.214337035031592,0.177340233642274,0.713475270408282,0,0.304464949114599,0,0.63549621259146,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0.740778109478847,0.376736914009382,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0,0,0.316335993581135,0,0.216010681643603,0.836353184057875,0.87345025498471,0,0.247960367176008,0,0.129614973291793,0,0,0,0.330916980914195,0,0.258319646955462,0.168956125490778,0.469428954583016,0.5208175393758,0.104859344425711,0.241584120826006,0,0.632022241256357,0.608175645870493,0.718976700153791,0.389762468933385,0.179026695667481,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.15241361331,0.403304740547362,0.487289403698762,0,0.350630706544707,0,0,0.179427713218951,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.518936737920883,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.715308569841963,0,0,0.0846146078916765,0.548783918618318,0.526139422875686,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr10:79457763..79457780,+ | |short_description=p@chr10:79457763..79457780,+ | ||
}} | }} |
Latest revision as of 19:03, 4 August 2015
Short description: | p@chr10:79457763..79457780, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79457763..79457780, + |
Coexpression cluster: | MCL_coexpression_mm9:481 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 5.68e-15 | 9 |
muscle precursor cell | 2.28e-13 | 6 |
muscle cell | 2.28e-13 | 6 |
myoblast | 2.28e-13 | 6 |
oligodendrocyte precursor cell | 8.62e-12 | 8 |
motile cell | 1.01e-11 | 54 |
mesodermal cell | 2.48e-11 | 7 |
migratory neural crest cell | 3.27e-09 | 10 |
neuron associated cell | 3.27e-09 | 10 |
glial cell (sensu Vertebrata) | 3.27e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 3.27e-09 | 10 |
glial cell | 3.27e-09 | 10 |
glioblast | 3.27e-09 | 10 |
glioblast (sensu Vertebrata) | 3.27e-09 | 10 |
oligodendrocyte | 1.88e-08 | 6 |
macroglial cell | 1.88e-08 | 6 |
astrocyte | 1.88e-08 | 6 |
connective tissue cell | 1.05e-07 | 46 |
mesenchymal cell | 1.05e-07 | 46 |
smooth muscle cell | 1.14e-07 | 3 |
vascular associated smooth muscle cell | 1.14e-07 | 3 |
aortic smooth muscle cell | 1.14e-07 | 3 |
smooth muscle myoblast | 1.14e-07 | 3 |
somatic stem cell | 1.30e-07 | 91 |
multi fate stem cell | 1.30e-07 | 91 |
cardiocyte | 2.63e-07 | 3 |
striated muscle cell | 2.63e-07 | 3 |
cardiac muscle cell | 2.63e-07 | 3 |
cardiac muscle myoblast | 2.63e-07 | 3 |
stem cell | 8.53e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.68e-15 | 9 |
striated muscle tissue | 5.68e-15 | 9 |
muscle tissue | 5.68e-15 | 9 |
multilaminar epithelium | 5.68e-15 | 9 |
epithelial vesicle | 5.68e-15 | 9 |
musculature | 5.68e-15 | 9 |
somite | 5.68e-15 | 9 |
myotome | 5.68e-15 | 9 |
presomitic mesoderm | 5.68e-15 | 9 |
presumptive segmental plate | 5.68e-15 | 9 |
dermomyotome | 5.68e-15 | 9 |
trunk paraxial mesoderm | 5.68e-15 | 9 |
musculature of body | 2.58e-13 | 10 |
dense mesenchyme tissue | 5.85e-12 | 11 |
paraxial mesoderm | 5.85e-12 | 11 |
presumptive paraxial mesoderm | 5.85e-12 | 11 |
musculoskeletal system | 7.58e-12 | 32 |
connective tissue | 1.05e-07 | 46 |
smooth muscle tissue | 1.14e-07 | 3 |
blood vessel smooth muscle | 1.14e-07 | 3 |
arterial system smooth muscle | 1.14e-07 | 3 |
artery smooth muscle tissue | 1.14e-07 | 3 |
aorta smooth muscle tissue | 1.14e-07 | 3 |