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FFCP PHASE1:Mm9::chr11:60624730..60624743,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20425
|EntrezGene=20425
|HGNC=
|HGNC=
|MCL_coexpression_id=2694
|TSSclassifier=NA
|UniProt=P50431
|UniProt=P50431
|association_with_transcript=23bp_to_ENSMUST00000018744,NM_009171,uc007jgo.1,uc007jgp.1_5end
|association_with_transcript=23bp_to_ENSMUST00000018744,NM_009171,uc007jgo.1,uc007jgp.1_5end
|cluster_id=chr11:60624730..60624743,-
|description=CAGE_peak_2_at_Shmt1_5end
|description=CAGE_peak_2_at_Shmt1_5end
|id=chr11:60624730..60624743,-
|id=chr11:60624730..60624743,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!5.87e-13!23;UBERON:0009856!5.87e-13!23;UBERON:0002107!1.34e-12!22;UBERON:0007499!1.34e-12!22;UBERON:0006925!1.34e-12!22;UBERON:0009497!1.34e-12!22;UBERON:0000015!1.34e-12!22;UBERON:0002423!1.34e-12!22;UBERON:0006235!1.34e-12!22;UBERON:0008835!1.34e-12!22;UBERON:0003894!1.34e-12!22;UBERON:0004161!1.34e-12!22;UBERON:0008836!1.34e-12!22;UBERON:0005172!6.48e-12!49;UBERON:0005173!6.48e-12!49;UBERON:0002417!6.48e-12!49;UBERON:0000916!6.48e-12!49;UBERON:0002365!5.94e-11!25;UBERON:0002330!5.94e-11!25;UBERON:0003929!1.07e-10!55;UBERON:0002368!5.48e-10!60;UBERON:0001007!1.05e-09!128;UBERON:0001555!1.05e-09!128;UBERON:0007026!1.05e-09!128;UBERON:0002530!1.70e-09!65;UBERON:0004119!3.48e-09!130;UBERON:0000925!3.48e-09!130;UBERON:0006595!3.48e-09!130;UBERON:0004921!3.86e-09!126;UBERON:0004185!3.86e-09!126;UBERON:0009569!4.37e-08!66;UBERON:0005911!5.10e-08!69;UBERON:0000949!1.55e-07!72;UBERON:0005057!9.93e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.29e-18,23;UBERON:0009856,7.29e-18,23;UBERON:0002107,2.70e-17,22;UBERON:0007499,2.70e-17,22;UBERON:0006925,2.70e-17,22;UBERON:0009497,2.70e-17,22;UBERON:0000015,2.70e-17,22;UBERON:0002423,2.70e-17,22;UBERON:0006235,2.70e-17,22;UBERON:0008835,2.70e-17,22;UBERON:0003894,2.70e-17,22;UBERON:0004161,2.70e-17,22;UBERON:0008836,2.70e-17,22;UBERON:0005172,6.09e-16,49;UBERON:0005173,6.09e-16,49;UBERON:0002417,6.09e-16,49;UBERON:0000916,6.09e-16,49;UBERON:0002365,2.82e-14,25;UBERON:0002330,2.82e-14,25;UBERON:0003929,5.20e-13,55;UBERON:0001007,1.12e-11,116;UBERON:0001555,1.12e-11,116;UBERON:0007026,1.12e-11,116;UBERON:0004119,3.45e-11,118;UBERON:0000925,3.45e-11,118;UBERON:0006595,3.45e-11,118;UBERON:0009569,6.98e-11,66;UBERON:0004921,7.08e-11,114;UBERON:0003104,1.58e-10,61;UBERON:0009142,1.58e-10,61;UBERON:0002368,1.77e-10,60;UBERON:0005256,5.31e-10,45;UBERON:0005911,5.54e-10,69;UBERON:0002530,1.32e-09,65;UBERON:0000490,5.47e-09,66;UBERON:0005177,1.32e-08,79;UBERON:0000949,2.19e-08,72;UBERON:0000160,1.14e-07,31
|phase1_expression=0.320297694209588,0.697950815278722,1.36499771816861,0.30246421130683,0,4.70061961353291,2.80335168714631,0,0.563154888606667,0.468129052643987,3.76679530096111,3.5099749957948,0,0,0,0,0,0.157731082679119,0,0.84877930359606,0.850432901510698,0.397163804803541,0.522399578277871,2.07990149631429,1.14704640533585,0.57423196411502,2.15380998079537,2.37018355954478,0.950117097281869,1.51218077855958,1.55211357458713,2.54012269383853,3.69038872550742,0,11.2652131702997,10.6390173029435,10.8209758819056,0,0,0,0,0,0,0,0.304130793658544,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0.599200221036809,0,0.311068836925433,0.540023753326763,0,0.285650984403804,0,0.61245399607477,0.766763768145891,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,14.6272059086836,5.439770669662,21.5881276655127,9.09686984426737,9.40856462904405,3.65155492342555,0,0.519572009205738,0,0,0,0,0,0.432982082022428,0,0.505524445014783,3.76806803072898,0.258937883647172,0.593768556259299,2.60227990149204,5.78484408793068,5.76538743140146,6.78251882486802,0.823120949949934,1.25666591329675,0,0.289198713839823,0.884610551949874,0,0,0.484875253135222,1.86391761218122,0,0,0.766371165625774,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.650602214813519,0.919608417733892,1.0803727788321,0.452114453507145,0.544291993210623,0.512454881139399,0.468508622798644,0,2.80238390812695,0.378212160335639,0.175951124163949,0.657587197282725,0.278047249225598,0.348252166522167,0.823128545631774,1.39323986772945,0.702213187313235,0.257347907114715,0.568326998791185,1.03562886267751,0.938104239924385,0.180062061461015,0.710234206755631,0,0.617068451549513,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,4.23120906661671,1.06644125267617,1.62565670302307,2.70621668776396,3.83198696784351,3.11329261382818,1.52180500890047,0.949058123089023,1.4822905925161,1.00534083520108,0.994782360205754,0.779856348476481,1.79763881730844,1.08069024937347,0.995706366271836,1.70701110857774,1.48523066392647,1.1270773567308,1.01825663922657,0.581857461502877,0.841629838683823,1.45444035385792,2.06654207171443,2.66897837330337,3.45512058981041,11.2651998293117,1.33476084572875,0.982794975566015,3.82265591054251,2.84004169943904,2.17059443777175,4.32863948028414,3.74004978686054,2.7562988551756,11.5315793538994,4.31304619582064,6.32639611036456,5.61667811606209,18.9434158460334,12.19902411949,11.0962009913574,0.369506380333209,1.51593129416388,1.14075483509418,1.01847051465113,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.780877488593277,0.646270193198397,0.477937595905104,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0,0,0,2.18502572539483,2.41858845571801,0.565815239267694,0,0.922305443831782,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,1.03486947026204,0.643011105094777,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0.49465875882444,0.322928853391811,0.784068024066026,0.954978752025092,0.164140899745061,2.33184669303881,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0,0,0,0.276399947608848,0,0.632671987162271,1.21991680276109,1.62008011232702,1.04544148007234,0.655087691238533,0.674321731924103,0.991841468704031,0.26175594198403,1.42576470620972,0.621339313086926,0.56369293868419,2.24274819065968,1.98550188548517,0.388902376688095,1.03327858782185,0.675824501963113,0.58678619322877,1.43224823328345,2.41176492179135,1.20792060413003,0.864090018773596,0.316011120628178,0.202725215290164,2.46506297195585,2.07873316764472,1.61124026100733,2.98022032171897,0.961563596159751,0.886137163047463,1.31256384932592,0.914481679859998,0.907435666231565,0.0974578807397524,0.673482891482306,0.116876902181569,0,4.88369097422942,9.15081337416652,2.68615386182526,0.19318959403219,0,0.36630324853453,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,1.55681021376265,0,0.853668028770671,0.972426868273176,2.30574478890781,2.02227859295016,0.44449345560323,1.23621034343337,0.64183841918363,1.01078884705519,0.50695859978048,1.13175804831646,0.842773567228942,1.15245274328765,0.918967503289812,0.952587382566147,0.927074607558844,1.73618298417335,1.23625770240992,1.03039244094078,0,0.70990322463735,1.43061713968393,0.436039249896986,1.12931256498397,0.846146078916765,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.949080144993393,1.57607171800902,0.409231043169689,1.08455788830176,0.385813221962283,0.499621155875892,0.701794825336225,0,0.57386499620653,0.220591419119515,0.463735671240843
|phase1_expression=0.320297694209588,0.697950815278722,1.36499771816861,0.30246421130683,0,4.70061961353291,2.80335168714631,0,0.563154888606667,0.468129052643987,3.76679530096111,3.5099749957948,0,0,0,0,0,0.157731082679119,0,0.84877930359606,0.850432901510698,0.397163804803541,0.522399578277871,2.07990149631429,1.14704640533585,0.57423196411502,2.15380998079537,2.37018355954478,0.950117097281869,1.51218077855958,1.55211357458713,2.54012269383853,3.69038872550742,0,11.2652131702997,10.6390173029435,10.8209758819056,0,0,0,0,0,0,0,0.304130793658544,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0.599200221036809,0,0.311068836925433,0.540023753326763,0,0.285650984403804,0,0.61245399607477,0.766763768145891,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,14.6272059086836,5.439770669662,21.5881276655127,9.09686984426737,9.40856462904405,3.65155492342555,0,0.519572009205738,0,0,0,0,0,0.432982082022428,0,0.505524445014783,3.76806803072898,0.258937883647172,0.593768556259299,2.60227990149204,5.78484408793068,5.76538743140146,6.78251882486802,0.823120949949934,1.25666591329675,0,0.289198713839823,0.884610551949874,0,0,0.484875253135222,1.86391761218122,0,0,0.766371165625774,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.650602214813519,0.919608417733892,1.0803727788321,0.452114453507145,0.544291993210623,0.512454881139399,0.468508622798644,0,2.80238390812695,0.378212160335639,0.175951124163949,0.657587197282725,0.278047249225598,0.348252166522167,0.823128545631774,1.39323986772945,0.702213187313235,0.257347907114715,0.568326998791185,1.03562886267751,0.938104239924385,0.180062061461015,0.710234206755631,0,0.617068451549513,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,4.23120906661671,1.06644125267617,1.62565670302307,2.70621668776396,3.83198696784351,3.11329261382818,1.52180500890047,0.949058123089023,1.4822905925161,1.00534083520108,0.994782360205754,0.779856348476481,1.79763881730844,1.08069024937347,0.995706366271836,1.70701110857774,1.48523066392647,1.1270773567308,1.01825663922657,0.581857461502877,0.841629838683823,1.45444035385792,2.06654207171443,2.66897837330337,3.45512058981041,11.2651998293117,1.33476084572875,0.982794975566015,3.82265591054251,2.84004169943904,2.17059443777175,4.32863948028414,3.74004978686054,2.7562988551756,11.5315793538994,4.31304619582064,6.32639611036456,5.61667811606209,18.9434158460334,12.19902411949,11.0962009913574,0.369506380333209,1.51593129416388,1.14075483509418,1.01847051465113,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.780877488593277,0.646270193198397,0.477937595905104,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0,0,0,2.18502572539483,2.41858845571801,0.565815239267694,0,0.922305443831782,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,1.03486947026204,0.643011105094777,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0.49465875882444,0.322928853391811,0.784068024066026,0.954978752025092,0.164140899745061,2.33184669303881,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0,0,0,0.276399947608848,0,0.632671987162271,1.21991680276109,1.62008011232702,1.04544148007234,0.655087691238533,0.674321731924103,0.991841468704031,0.26175594198403,1.42576470620972,0.621339313086926,0.56369293868419,2.24274819065968,1.98550188548517,0.388902376688095,1.03327858782185,0.675824501963113,0.58678619322877,1.43224823328345,2.41176492179135,1.20792060413003,0.864090018773596,0.316011120628178,0.202725215290164,2.46506297195585,2.07873316764472,1.61124026100733,2.98022032171897,0.961563596159751,0.886137163047463,1.31256384932592,0.914481679859998,0.907435666231565,0.0974578807397524,0.673482891482306,0.116876902181569,0,4.88369097422942,9.15081337416652,2.68615386182526,0.19318959403219,0,0.36630324853453,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,1.55681021376265,0,0.853668028770671,0.972426868273176,2.30574478890781,2.02227859295016,0.44449345560323,1.23621034343337,0.64183841918363,1.01078884705519,0.50695859978048,1.13175804831646,0.842773567228942,1.15245274328765,0.918967503289812,0.952587382566147,0.927074607558844,1.73618298417335,1.23625770240992,1.03039244094078,0,0.70990322463735,1.43061713968393,0.436039249896986,1.12931256498397,0.846146078916765,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.949080144993393,1.57607171800902,0.409231043169689,1.08455788830176,0.385813221962283,0.499621155875892,0.701794825336225,0,0.57386499620653,0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|short_description=p2@Shmt1
|short_description=p2@Shmt1
}}
}}

Latest revision as of 20:11, 1 October 2015

Short description:p2@Shmt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shmt1_5end
Coexpression cluster:MCL_coexpression_mm9:2694
Association with transcript: 23bp_to_ENSMUST00000018744, NM_009171, uc007jgo.1, uc007jgp.1_5end
EntrezGene:Shmt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shmt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.27
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.59
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G211.53
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A318.94
liver, neonate N25.CNhs11198.1368-26H112.20
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum7.29e-1823
sac7.29e-1823
liver2.70e-1722
epithelial sac2.70e-1722
digestive gland2.70e-1722
epithelium of foregut-midgut junction2.70e-1722
anatomical boundary2.70e-1722
hepatobiliary system2.70e-1722
foregut-midgut junction2.70e-1722
hepatic diverticulum2.70e-1722
liver primordium2.70e-1722
septum transversum2.70e-1722
liver bud2.70e-1722
abdomen element6.09e-1649
abdominal segment element6.09e-1649
abdominal segment of trunk6.09e-1649
abdomen6.09e-1649
exocrine gland2.82e-1425
exocrine system2.82e-1425
gut epithelium5.20e-1355
digestive system1.12e-11116
digestive tract1.12e-11116
primitive gut1.12e-11116
endoderm-derived structure3.45e-11118
endoderm3.45e-11118
presumptive endoderm3.45e-11118
subdivision of trunk6.98e-1166
subdivision of digestive tract7.08e-11114
mesenchyme1.58e-1061
entire embryonic mesenchyme1.58e-1061
endocrine gland1.77e-1060
trunk mesenchyme5.31e-1045
endo-epithelium5.54e-1069
gland1.32e-0965
unilaminar epithelium5.47e-0966
trunk region element1.32e-0879
endocrine system2.19e-0872
intestine1.14e-0731
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