FFCP PHASE1:Mm9::chr13:97312509..97312522,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27015 | |EntrezGene=27015 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=83 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QUG2,E9QMR6,Q5Q9H4 | |UniProt=Q9QUG2,E9QMR6,Q5Q9H4 | ||
|association_with_transcript=-69bp_to_ENSMUST00000022172,ENSMUST00000109449,NM_012048,uc007rne.1,uc007rng.1,uc007rnh.1_5end | |association_with_transcript=-69bp_to_ENSMUST00000022172,ENSMUST00000109449,NM_012048,uc007rne.1,uc007rng.1,uc007rnh.1_5end | ||
|cluster_id=chr13:97312509..97312522,- | |||
|description=CAGE_peak_3_at_Polk_5end | |description=CAGE_peak_3_at_Polk_5end | ||
|id=chr13:97312509..97312522,- | |id=chr13:97312509..97312522,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.84e-11,9;CL:0000349,1.66e-09,3;CL:0000351,1.66e-09,3;CL:0000192,4.92e-09,3;CL:0000359,4.92e-09,3;CL:0002539,4.92e-09,3;CL:0000514,4.92e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002342!3.62e-08!10;UBERON:0005062!3.62e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,8.52e-20,7;UBERON:0006858,8.52e-20,7;UBERON:0002410,1.84e-11,9;UBERON:0000013,1.12e-09,3;UBERON:0010313,1.66e-09,3;UBERON:0002342,1.66e-09,3;UBERON:0000358,1.66e-09,3;UBERON:0002005,1.66e-09,3;UBERON:0000307,1.66e-09,3;UBERON:0007010,1.66e-09,3;UBERON:0005428,1.66e-09,3;UBERON:0005062,1.66e-09,3;UBERON:0003064,2.23e-09,14;UBERON:0000010,3.03e-09,11;UBERON:0001135,4.92e-09,3;UBERON:0004237,4.92e-09,3;UBERON:0004695,4.92e-09,3;UBERON:0002111,4.92e-09,3;UBERON:0004178,4.92e-09,3;UBERON:0000947,7.21e-07,4;UBERON:0001637,7.21e-07,4;UBERON:0004573,7.21e-07,4;UBERON:0003509,7.21e-07,4;UBERON:0004571,7.21e-07,4;UBERON:0010191,7.21e-07,4;UBERON:0004572,7.21e-07,4 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0,0.258246646883153,0.281577444303333,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0,0.42438965179803,0.255129870453209,0.496454756004426,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.88845226963366,1.62203089951223,1.65192076945513,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0,0,0.837548997004143,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0.227178579999552,0.68014404096107,0.289864488701678,0,2.03991400112325,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,1.29468941823586,1.48442139064825,1.04091196059682,7.00270600117925,7.84092690670599,8.13902258984162,5.76184664964954,1.38233250462643,0.494389935468748,0.433798070759735,0,0,0.441683036920787,1.45462575940567,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0,0.299581278809645,1.37250180845588,0.251308704225729,0,0.255715457330331,0.62336413367868,0.486723789203273,0.81471491080253,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0,0.408218994907967,0.384341160854549,0.0937017245597288,0.517406741478031,0,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.925602677324269,1.16266972375204,0.268273401399619,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0.420579897128254,0.411618449517138,0,0.528901133327089,0,0.464473343720877,0.644337306610467,1.00841762311671,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0,0.571242563048644,1.1270773567308,0,0,0.280543279561274,0.505892296994058,0.147610147979602,0,0.493588655687202,0.592905254174298,0.166845105716094,0,0.224862112384854,0.608580364165509,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.757736633841335,0.538192240565737,0,0.369506380333209,0,0.162964976442026,0.678980343100753,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0.491589944147214,0,0.578596234326046,0,0,0.491764273019036,0,1.28440471990234,0.586058432961016,0.163934945376675,0.252470927204373,2.83957397474631,2.34263246577983,1.93881057959519,0.955875191810208,0.668396022247182,0.283076530788832,2.83367491172426,2.63030272120181,2.76701444562566,0,0.141940085208269,0,0.651547837414304,0.329940245945071,0,0.242780636154981,0,1.13163047853539,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0,1.05418608574999,1.03135543248187,0.680879211507576,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0.645857706783622,0.361877549568935,0.119372344003136,0.328281799490123,0,0.927126510052548,0,0.412773735926445,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.279902904647316,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0.655087691238533,0.269728692769641,0.41326727862668,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0.506868376472335,0.234714477291508,0.13020438484395,0.734015410979976,0.966336483304024,0.288030006257865,0.316011120628178,0,1.02710957164827,0.649604114888975,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.605798699688886,0.533447646584999,0.403304740547362,0.194915761479505,0.192423683280659,0.116876902181569,0.226730383615211,1.77588762699252,2.51198798506532,3.02192309455341,0.19318959403219,0.750729901804728,0.915758121336325,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.655490552289177,0.512201219238954,0.574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.735994600671987,0,0.177475806159338,0.476872379894642,0.726732083161643,0.282328141245992,0.507687647350059,0.365855945745545,0.526139422875686,0,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,1.15933917810211 | |phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0,0.258246646883153,0.281577444303333,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0,0.42438965179803,0.255129870453209,0.496454756004426,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.88845226963366,1.62203089951223,1.65192076945513,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0,0,0.837548997004143,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0.227178579999552,0.68014404096107,0.289864488701678,0,2.03991400112325,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,1.29468941823586,1.48442139064825,1.04091196059682,7.00270600117925,7.84092690670599,8.13902258984162,5.76184664964954,1.38233250462643,0.494389935468748,0.433798070759735,0,0,0.441683036920787,1.45462575940567,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0,0.299581278809645,1.37250180845588,0.251308704225729,0,0.255715457330331,0.62336413367868,0.486723789203273,0.81471491080253,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0,0.408218994907967,0.384341160854549,0.0937017245597288,0.517406741478031,0,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.925602677324269,1.16266972375204,0.268273401399619,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0.420579897128254,0.411618449517138,0,0.528901133327089,0,0.464473343720877,0.644337306610467,1.00841762311671,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0,0.571242563048644,1.1270773567308,0,0,0.280543279561274,0.505892296994058,0.147610147979602,0,0.493588655687202,0.592905254174298,0.166845105716094,0,0.224862112384854,0.608580364165509,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.757736633841335,0.538192240565737,0,0.369506380333209,0,0.162964976442026,0.678980343100753,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0.491589944147214,0,0.578596234326046,0,0,0.491764273019036,0,1.28440471990234,0.586058432961016,0.163934945376675,0.252470927204373,2.83957397474631,2.34263246577983,1.93881057959519,0.955875191810208,0.668396022247182,0.283076530788832,2.83367491172426,2.63030272120181,2.76701444562566,0,0.141940085208269,0,0.651547837414304,0.329940245945071,0,0.242780636154981,0,1.13163047853539,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0,1.05418608574999,1.03135543248187,0.680879211507576,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0.645857706783622,0.361877549568935,0.119372344003136,0.328281799490123,0,0.927126510052548,0,0.412773735926445,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.279902904647316,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0.655087691238533,0.269728692769641,0.41326727862668,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0.506868376472335,0.234714477291508,0.13020438484395,0.734015410979976,0.966336483304024,0.288030006257865,0.316011120628178,0,1.02710957164827,0.649604114888975,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.605798699688886,0.533447646584999,0.403304740547362,0.194915761479505,0.192423683280659,0.116876902181569,0.226730383615211,1.77588762699252,2.51198798506532,3.02192309455341,0.19318959403219,0.750729901804728,0.915758121336325,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.655490552289177,0.512201219238954,0.574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.735994600671987,0,0.177475806159338,0.476872379894642,0.726732083161643,0.282328141245992,0.507687647350059,0.365855945745545,0.526139422875686,0,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,1.15933917810211 | ||
|short_description=p3@Polk | |short_description=p3@Polk | ||
}} | }} |
Latest revision as of 14:03, 25 September 2015
Short description: | p3@Polk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Polk_5end |
Coexpression cluster: | MCL_coexpression_mm9:83 |
Association with transcript: | -69bp_to_ENSMUST00000022172, ENSMUST00000109449, NM_012048, uc007rne.1, uc007rng.1, uc007rnh.1_5end |
EntrezGene: | Polk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.84e-11 | 9 |
extraembryonic cell | 1.66e-09 | 3 |
trophoblast cell | 1.66e-09 | 3 |
smooth muscle cell | 4.92e-09 | 3 |
vascular associated smooth muscle cell | 4.92e-09 | 3 |
aortic smooth muscle cell | 4.92e-09 | 3 |
smooth muscle myoblast | 4.92e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 8.52e-20 | 7 |
adrenal/interrenal gland | 8.52e-20 | 7 |
autonomic nervous system | 1.84e-11 | 9 |
sympathetic nervous system | 1.12e-09 | 3 |
neural crest-derived structure | 1.66e-09 | 3 |
neural crest | 1.66e-09 | 3 |
blastocyst | 1.66e-09 | 3 |
enteric nervous system | 1.66e-09 | 3 |
blastula | 1.66e-09 | 3 |
cleaving embryo | 1.66e-09 | 3 |
vagal neural crest | 1.66e-09 | 3 |
neural fold | 1.66e-09 | 3 |
intermediate mesoderm | 2.23e-09 | 14 |
peripheral nervous system | 3.03e-09 | 11 |
smooth muscle tissue | 4.92e-09 | 3 |
blood vessel smooth muscle | 4.92e-09 | 3 |
arterial system smooth muscle | 4.92e-09 | 3 |
artery smooth muscle tissue | 4.92e-09 | 3 |
aorta smooth muscle tissue | 4.92e-09 | 3 |
aorta | 7.21e-07 | 4 |
artery | 7.21e-07 | 4 |
systemic artery | 7.21e-07 | 4 |
arterial blood vessel | 7.21e-07 | 4 |
systemic arterial system | 7.21e-07 | 4 |
aortic system | 7.21e-07 | 4 |
arterial system | 7.21e-07 | 4 |