FFCP PHASE1:Mm9::chr10:77365212..77365274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237387 | |EntrezGene=237387 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=P59034,Q543Z4 | |UniProt=P59034,Q543Z4 | ||
|association_with_transcript=6bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end | |association_with_transcript=6bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end | ||
|cluster_id=chr10:77365212..77365274,- | |||
|description=CAGE_peak_1_at_Lrrc3_5end | |description=CAGE_peak_1_at_Lrrc3_5end | ||
|id=chr10:77365212..77365274,- | |id=chr10:77365212..77365274,- | ||
|ontology_enrichment_celltype=CL:0000540!4.01e-10!33;CL:0000047!4.01e-10!33;CL:0000031!4.01e-10!33;CL:0000404!4.01e-10!33;CL:0000117!1.71e-07!23;CL:0000337!1.71e-07!23;CL:0000393!3.28e-07!39;CL:0000211!3.28e-07!39 | |ontology_enrichment_celltype=CL:0000540!4.01e-10!33;CL:0000047!4.01e-10!33;CL:0000031!4.01e-10!33;CL:0000404!4.01e-10!33;CL:0000117!1.71e-07!23;CL:0000337!1.71e-07!23;CL:0000393!3.28e-07!39;CL:0000211!3.28e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.43e-10,33;CL:0000047,3.43e-10,33;CL:0000031,3.43e-10,33;CL:0000404,3.43e-10,33;CL:0000393,1.85e-07,39;CL:0000211,1.85e-07,39;CL:0000117,2.50e-07,23;CL:0000337,2.50e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!6.24e-15!23;UBERON:0009856!6.24e-15!23;UBERON:0002107!1.40e-14!22;UBERON:0007499!1.40e-14!22;UBERON:0006925!1.40e-14!22;UBERON:0009497!1.40e-14!22;UBERON:0000015!1.40e-14!22;UBERON:0002423!1.40e-14!22;UBERON:0006235!1.40e-14!22;UBERON:0008835!1.40e-14!22;UBERON:0003894!1.40e-14!22;UBERON:0004161!1.40e-14!22;UBERON:0008836!1.40e-14!22;UBERON:0002365!1.45e-13!25;UBERON:0002330!1.45e-13!25;UBERON:0001017!2.05e-10!73;UBERON:0005743!2.05e-10!73;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0004121!3.25e-09!102;UBERON:0000924!3.25e-09!102;UBERON:0006601!3.25e-09!102;UBERON:0002020!4.25e-09!34;UBERON:0005172!4.70e-09!49;UBERON:0005173!4.70e-09!49;UBERON:0002417!4.70e-09!49;UBERON:0000916!4.70e-09!49;UBERON:0000468!1.06e-08!333;UBERON:0002346!2.09e-08!71;UBERON:0003075!2.09e-08!71;UBERON:0007284!2.09e-08!71;UBERON:0000025!1.18e-07!114;UBERON:0004111!3.84e-07!122;UBERON:0001049!4.49e-07!52;UBERON:0005068!4.49e-07!52;UBERON:0006241!4.49e-07!52;UBERON:0007135!4.49e-07!52;UBERON:0000922!9.53e-07!328;UBERON:0005256!9.57e-07!47;UBERON:0002791!9.92e-07!29;UBERON:0003528!9.92e-07!29;UBERON:0001893!9.92e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.45e-16,23;UBERON:0009856,3.45e-16,23;UBERON:0002107,8.32e-16,22;UBERON:0007499,8.32e-16,22;UBERON:0006925,8.32e-16,22;UBERON:0009497,8.32e-16,22;UBERON:0000015,8.32e-16,22;UBERON:0002423,8.32e-16,22;UBERON:0006235,8.32e-16,22;UBERON:0008835,8.32e-16,22;UBERON:0003894,8.32e-16,22;UBERON:0004161,8.32e-16,22;UBERON:0008836,8.32e-16,22;UBERON:0002365,2.72e-14,25;UBERON:0002330,2.72e-14,25;UBERON:0001017,1.53e-09,73;UBERON:0005172,8.10e-09,49;UBERON:0005173,8.10e-09,49;UBERON:0002417,8.10e-09,49;UBERON:0000916,8.10e-09,49;UBERON:0001016,1.01e-08,75;UBERON:0002020,1.15e-08,34;UBERON:0005256,4.45e-08,45;UBERON:0000073,2.94e-07,54 | |||
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|short_description=p1@Lrrc3 | |short_description=p1@Lrrc3 | ||
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Latest revision as of 08:20, 26 September 2015
Short description: | p1@Lrrc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 6bp_to_ENSMUST00000057608, NM_145152, uc007fwi.2_5end |
EntrezGene: | Lrrc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.43e-10 | 33 |
neuronal stem cell | 3.43e-10 | 33 |
neuroblast | 3.43e-10 | 33 |
electrically signaling cell | 3.43e-10 | 33 |
electrically responsive cell | 1.85e-07 | 39 |
electrically active cell | 1.85e-07 | 39 |
CNS neuron (sensu Vertebrata) | 2.50e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.45e-16 | 23 |
sac | 3.45e-16 | 23 |
liver | 8.32e-16 | 22 |
epithelial sac | 8.32e-16 | 22 |
digestive gland | 8.32e-16 | 22 |
epithelium of foregut-midgut junction | 8.32e-16 | 22 |
anatomical boundary | 8.32e-16 | 22 |
hepatobiliary system | 8.32e-16 | 22 |
foregut-midgut junction | 8.32e-16 | 22 |
hepatic diverticulum | 8.32e-16 | 22 |
liver primordium | 8.32e-16 | 22 |
septum transversum | 8.32e-16 | 22 |
liver bud | 8.32e-16 | 22 |
exocrine gland | 2.72e-14 | 25 |
exocrine system | 2.72e-14 | 25 |
central nervous system | 1.53e-09 | 73 |
abdomen element | 8.10e-09 | 49 |
abdominal segment element | 8.10e-09 | 49 |
abdominal segment of trunk | 8.10e-09 | 49 |
abdomen | 8.10e-09 | 49 |
nervous system | 1.01e-08 | 75 |
gray matter | 1.15e-08 | 34 |
trunk mesenchyme | 4.45e-08 | 45 |
regional part of nervous system | 2.94e-07 | 54 |