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FFCP PHASE1:Mm9::chr11:60624526..60624529,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20425
|EntrezGene=20425
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=63bp_to_ENSMUST00000173260_5end
|association_with_transcript=63bp_to_ENSMUST00000173260_5end
|cluster_id=chr11:60624526..60624529,-
|description=CAGE_peak_4_at_Shmt1_5end
|description=CAGE_peak_4_at_Shmt1_5end
|id=chr11:60624526..60624529,-
|id=chr11:60624526..60624529,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,2.96e-17,5;CL:0000223,2.59e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!6.68e-18!49;UBERON:0005173!6.68e-18!49;UBERON:0002417!6.68e-18!49;UBERON:0000916!6.68e-18!49;UBERON:0002365!6.63e-17!25;UBERON:0002330!6.63e-17!25;UBERON:0002107!7.16e-17!22;UBERON:0007499!7.16e-17!22;UBERON:0006925!7.16e-17!22;UBERON:0009497!7.16e-17!22;UBERON:0000015!7.16e-17!22;UBERON:0002423!7.16e-17!22;UBERON:0006235!7.16e-17!22;UBERON:0008835!7.16e-17!22;UBERON:0003894!7.16e-17!22;UBERON:0004161!7.16e-17!22;UBERON:0008836!7.16e-17!22;UBERON:0009854!1.20e-15!23;UBERON:0009856!1.20e-15!23;UBERON:0009569!9.94e-11!66;UBERON:0005256!1.26e-09!47;UBERON:0002530!5.35e-09!65;UBERON:0003914!7.67e-09!47;UBERON:0002368!2.04e-08!60;UBERON:0003929!1.29e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.28e-41,22;UBERON:0007499,9.28e-41,22;UBERON:0006925,9.28e-41,22;UBERON:0009497,9.28e-41,22;UBERON:0000015,9.28e-41,22;UBERON:0002423,9.28e-41,22;UBERON:0006235,9.28e-41,22;UBERON:0008835,9.28e-41,22;UBERON:0003894,9.28e-41,22;UBERON:0004161,9.28e-41,22;UBERON:0008836,9.28e-41,22;UBERON:0002365,1.17e-39,25;UBERON:0002330,1.17e-39,25;UBERON:0009854,7.76e-39,23;UBERON:0009856,7.76e-39,23;UBERON:0005172,1.93e-28,49;UBERON:0005173,1.93e-28,49;UBERON:0002417,1.93e-28,49;UBERON:0000916,1.93e-28,49;UBERON:0005256,1.15e-25,45;UBERON:0003104,5.25e-22,61;UBERON:0009142,5.25e-22,61;UBERON:0009569,5.17e-20,66;UBERON:0002530,2.29e-18,65;UBERON:0002368,3.05e-18,60;UBERON:0003929,4.87e-18,55;UBERON:0003914,3.21e-17,47;UBERON:0005177,5.23e-16,79;UBERON:0000949,1.59e-14,72;UBERON:0000490,2.19e-14,66;UBERON:0005911,1.37e-13,69;UBERON:0002100,1.61e-13,90;UBERON:0001041,7.39e-10,80;UBERON:0004921,1.33e-07,114;UBERON:0001007,2.11e-07,116;UBERON:0001555,2.11e-07,116;UBERON:0007026,2.11e-07,116;UBERON:0004119,3.30e-07,118;UBERON:0000925,3.30e-07,118;UBERON:0006595,3.30e-07,118
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.646413698057667,0.190023419456374,0,0.221730510655305,0,0,0,2.59966457776147,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,1.72084775396277,13.599426674155,7.55584468292944,5.84798775702902,5.82434953226536,4.21333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0.29688427812965,0,2.13125834818499,2.07553947530453,2.11011696773672,0.940709657085638,0.376999773989026,0.494389935468748,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0.590440591918409,1.8839847340965,1.35736880313981,10.3758419480502,0.500535317148282,0.196558995113203,0.674586337154561,0.405720242777006,0.72353147925725,2.5462585178142,1.15078454980324,1.29708181420028,4.94210543738547,4.31304619582064,3.34926852901653,4.68056509671841,5.80931419278357,6.27890947326693,6.27176577772377,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0.247960367176008,0,0.259229946583586,1.24267862617385,1.12738587736838,0,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.358855426437903,0.335769232728157,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.459483751644906,0,0.231768651889711,0.964546102318525,0.412085900803307,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.593175090620871,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.646413698057667,0.190023419456374,0,0.221730510655305,0,0,0,2.59966457776147,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,1.72084775396277,13.599426674155,7.55584468292944,5.84798775702902,5.82434953226536,4.21333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0.29688427812965,0,2.13125834818499,2.07553947530453,2.11011696773672,0.940709657085638,0.376999773989026,0.494389935468748,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0.590440591918409,1.8839847340965,1.35736880313981,10.3758419480502,0.500535317148282,0.196558995113203,0.674586337154561,0.405720242777006,0.72353147925725,2.5462585178142,1.15078454980324,1.29708181420028,4.94210543738547,4.31304619582064,3.34926852901653,4.68056509671841,5.80931419278357,6.27890947326693,6.27176577772377,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0.247960367176008,0,0.259229946583586,1.24267862617385,1.12738587736838,0,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.358855426437903,0.335769232728157,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.459483751644906,0,0.231768651889711,0.964546102318525,0.412085900803307,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.593175090620871,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0
|short_description=p4@Shmt1
|short_description=p4@Shmt1
}}
}}

Latest revision as of 20:11, 1 October 2015

Short description:p4@Shmt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Shmt1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 63bp_to_ENSMUST00000173260_5end
EntrezGene:Shmt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Shmt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B210.38
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte2.96e-175
endodermal cell2.59e-0720

Uber anatomy
Ontology termp-valuen
liver9.28e-4122
epithelial sac9.28e-4122
digestive gland9.28e-4122
epithelium of foregut-midgut junction9.28e-4122
anatomical boundary9.28e-4122
hepatobiliary system9.28e-4122
foregut-midgut junction9.28e-4122
hepatic diverticulum9.28e-4122
liver primordium9.28e-4122
septum transversum9.28e-4122
liver bud9.28e-4122
exocrine gland1.17e-3925
exocrine system1.17e-3925
digestive tract diverticulum7.76e-3923
sac7.76e-3923
abdomen element1.93e-2849
abdominal segment element1.93e-2849
abdominal segment of trunk1.93e-2849
abdomen1.93e-2849
trunk mesenchyme1.15e-2545
mesenchyme5.25e-2261
entire embryonic mesenchyme5.25e-2261
subdivision of trunk5.17e-2066
gland2.29e-1865
endocrine gland3.05e-1860
gut epithelium4.87e-1855
epithelial tube3.21e-1747
trunk region element5.23e-1679
endocrine system1.59e-1472
unilaminar epithelium2.19e-1466
endo-epithelium1.37e-1369
trunk1.61e-1390
foregut7.39e-1080
subdivision of digestive tract1.33e-07114
digestive system2.11e-07116
digestive tract2.11e-07116
primitive gut2.11e-07116
endoderm-derived structure3.30e-07118
endoderm3.30e-07118
presumptive endoderm3.30e-07118
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