FFCP PHASE1:Hg19::chr10:7769727..7769743,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3698 | |EntrezGene=3698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6167 | |HGNC=6167 | ||
|TSSclassifier=strong | |||
|UniProt=P19823 | |UniProt=P19823 | ||
|association_with_transcript=63bp_to_M18193,M33033_5end | |association_with_transcript=63bp_to_M18193,M33033_5end | ||
|cluster_id=chr10:7769727..7769743,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_ITIH2_5end | |description=CAGE_peak_4_at_ITIH2_5end | ||
|id=chr10:7769727..7769743,+ | |id=chr10:7769727..7769743,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.00e-48!12;CL:0000417!8.00e-48!12;CL:0000668!8.00e-48!12;CL:0000414!8.00e-48!12;CL:0000412!8.00e-48!12;CL:0000182!8.00e-48!12;CL:0002127!8.64e-13!1;CL:0000914!8.64e-13!1;CL:0000911!8.64e-13!1;CL:0000814!8.64e-13!1;CL:0002042!8.64e-13!1;CL:0002039!8.64e-13!1;CL:0002040!8.64e-13!1;CL:0002041!8.64e-13!1;CL:0000223!5.02e-12!59;CL:0000893!4.98e-07!2;CL:0002489!4.98e-07!2;CL:0000809!4.98e-07!2;CL:0000808!4.98e-07!2;CL:0000894!4.98e-07!2;CL:0000806!4.98e-07!2;CL:0000807!4.98e-07!2;CL:0000805!4.98e-07!2;CL:0002425!4.98e-07!2 | |ontology_enrichment_celltype=CL:0000181!8.00e-48!12;CL:0000417!8.00e-48!12;CL:0000668!8.00e-48!12;CL:0000414!8.00e-48!12;CL:0000412!8.00e-48!12;CL:0000182!8.00e-48!12;CL:0002127!8.64e-13!1;CL:0000914!8.64e-13!1;CL:0000911!8.64e-13!1;CL:0000814!8.64e-13!1;CL:0002042!8.64e-13!1;CL:0002039!8.64e-13!1;CL:0002040!8.64e-13!1;CL:0002041!8.64e-13!1;CL:0000223!5.02e-12!59;CL:0000893!4.98e-07!2;CL:0002489!4.98e-07!2;CL:0000809!4.98e-07!2;CL:0000808!4.98e-07!2;CL:0000894!4.98e-07!2;CL:0000806!4.98e-07!2;CL:0000807!4.98e-07!2;CL:0000805!4.98e-07!2;CL:0002425!4.98e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.63e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.76e-59,12;CL:0000223,2.58e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.90e-45;11!UBERON:0009497;3.61e-38;13!UBERON:0001041;1.06e-16;30!UBERON:0003104;3.96e-16;31!CL:0000223;3.25e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.81e-49!19;UBERON:0006925!1.81e-49!19;UBERON:0008836!1.81e-49!19;UBERON:0005057!3.69e-44!26;UBERON:0008835!1.32e-42!22;UBERON:0003894!1.32e-42!22;UBERON:0009854!1.02e-40!23;UBERON:0007499!2.18e-37!25;UBERON:0009497!2.18e-37!25;UBERON:0000015!2.18e-37!25;UBERON:0002423!2.18e-37!25;UBERON:0006235!2.18e-37!25;UBERON:0004161!2.18e-37!25;UBERON:0009856!6.46e-36!26;UBERON:0002368!1.59e-32!35;UBERON:0002365!5.64e-30!31;UBERON:0002330!5.64e-30!31;UBERON:0000949!4.81e-25!45;UBERON:0003929!4.97e-25!54;UBERON:0002530!8.09e-19!59;UBERON:0005172!1.84e-16!55;UBERON:0005173!1.84e-16!55;UBERON:0005911!5.20e-16!82;UBERON:0002417!9.71e-15!61;UBERON:0000916!9.71e-15!61;UBERON:0001882!9.73e-13!1;UBERON:0005403!9.73e-13!1;UBERON:0002363!1.09e-12!1;UBERON:0007647!1.09e-12!1;UBERON:0010115!1.09e-12!1;UBERON:0001041!7.94e-11!98;UBERON:0004921!1.48e-09!129;UBERON:0004185!1.48e-09!129;UBERON:0002405!6.08e-09!115;UBERON:0000490!6.49e-09!138;UBERON:0005177!6.27e-08!107;UBERON:0000077!7.78e-08!130;UBERON:0001007!1.04e-07!155;UBERON:0001555!1.04e-07!155;UBERON:0007026!1.04e-07!155;UBERON:0009569!1.90e-07!113;UBERON:0003914!4.39e-07!118;UBERON:0002360!5.60e-07!2;UBERON:0000094!5.60e-07!2;UBERON:0007645!5.60e-07!2;UBERON:0004119!6.01e-07!169;UBERON:0000925!6.01e-07!169;UBERON:0006595!6.01e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.79e-66;19!UBERON:0006925;3.79e-66;19!UBERON:0002423;2.84e-50;25!UBERON:0002365;5.86e-39;31!UBERON:0002330;5.86e-39;31!UBERON:0002368;2.11e-34;33!UBERON:0000949;4.17e-25;43!UBERON:0005172;5.93e-15;52!UBERON:0005173;5.93e-15;52!UBERON:0002417;4.09e-13;58!UBERON:0000916;4.09e-13;58!UBERON:0002530;5.28e-13;57!UBERON:0001007;3.85e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.48e-66,19;UBERON:0006925,3.48e-66,19;UBERON:0008836,3.48e-66,19;UBERON:0008835,3.67e-57,22;UBERON:0003894,3.67e-57,22;UBERON:0009854,1.12e-54,23;UBERON:0007499,2.66e-50,25;UBERON:0009497,2.66e-50,25;UBERON:0000015,2.66e-50,25;UBERON:0002423,2.66e-50,25;UBERON:0006235,2.66e-50,25;UBERON:0004161,2.66e-50,25;UBERON:0009856,2.30e-48,26;UBERON:0002365,1.48e-40,31;UBERON:0002330,1.48e-40,31;UBERON:0002368,6.55e-36,35;UBERON:0000949,6.71e-28,45;UBERON:0003929,3.22e-23,54;UBERON:0005172,3.22e-23,54;UBERON:0005173,3.22e-23,54;UBERON:0002530,3.11e-21,59;UBERON:0002417,7.10e-21,60;UBERON:0000916,7.10e-21,60;UBERON:0005911,3.35e-15,82;UBERON:0001041,2.61e-14,87;UBERON:0005177,2.80e-12,101;UBERON:0009569,4.90e-11,112;UBERON:0003914,1.51e-10,117;UBERON:0004921,2.31e-10,118;UBERON:0005256,4.25e-10,122;UBERON:0001007,2.29e-08,145;UBERON:0001555,2.29e-08,145;UBERON:0007026,2.29e-08,145;UBERON:0000490,3.02e-08,148;UBERON:0001048,1.36e-07,160;UBERON:0003104,1.36e-07,160;UBERON:0009142,1.36e-07,160;UBERON:0004119,1.53e-07,160;UBERON:0000925,1.53e-07,160;UBERON:0006595,1.53e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,4.91413608338813,1.77236972004421,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78159275074674,4.69770392772649,3.70719491198017,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,4.91413608338813,1.77236972004421,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78159275074674,4.69770392772649,3.70719491198017,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ITIH2 | |short_description=p4@ITIH2 | ||
}} | }} |
Latest revision as of 09:37, 19 September 2015
Short description: | p4@ITIH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITIH2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 63bp_to_M18193, M33033_5end |
EntrezGene: | ITIH2 |
HGNC: | 6167 |
UniProt: | P19823 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.76e-59 | 12 |
endodermal cell | 2.58e-12 | 58 |