FFCP PHASE1:Hg19::chr11:46722117..46722183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=392 | |EntrezGene=392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=673 | |HGNC=673 | ||
|TSSclassifier=strong | |||
|UniProt=Q07960,E9PCG8 | |UniProt=Q07960,E9PCG8 | ||
|association_with_transcript=0bp_to_ENST00000311956,ENST00000443332,ENST00000524594,ENST00000529960,NM_004308,uc001ndd.2,uc009yle.1,uc009ylf.1_5end | |association_with_transcript=0bp_to_ENST00000311956,ENST00000443332,ENST00000524594,ENST00000529960,NM_004308,uc001ndd.2,uc009yle.1,uc009ylf.1_5end | ||
|cluster_id=chr11:46722117..46722183,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_ARHGAP1_5end | |description=CAGE_peak_1_at_ARHGAP1_5end | ||
|id=chr11:46722117..46722183,- | |id=chr11:46722117..46722183,- | ||
|ontology_enrichment_celltype=CL:0000055!5.80e-21!180;CL:0000183!2.63e-15!59;CL:0000222!7.16e-14!119;CL:0000192!1.51e-13!42;CL:0000514!1.51e-13!42;CL:0000680!2.67e-13!57;CL:0000056!2.67e-13!57;CL:0000355!2.67e-13!57;CL:0000187!3.04e-13!54;CL:0002371!1.89e-12!591;CL:0000057!7.10e-12!75;CL:0000359!4.06e-11!32;CL:0000393!1.17e-09!60;CL:0000211!1.17e-09!60;CL:0000144!4.61e-09!625;CL:0000220!2.03e-08!246;CL:0002321!5.75e-08!248 | |ontology_enrichment_celltype=CL:0000055!5.80e-21!180;CL:0000183!2.63e-15!59;CL:0000222!7.16e-14!119;CL:0000192!1.51e-13!42;CL:0000514!1.51e-13!42;CL:0000680!2.67e-13!57;CL:0000056!2.67e-13!57;CL:0000355!2.67e-13!57;CL:0000187!3.04e-13!54;CL:0002371!1.89e-12!591;CL:0000057!7.10e-12!75;CL:0000359!4.06e-11!32;CL:0000393!1.17e-09!60;CL:0000211!1.17e-09!60;CL:0000144!4.61e-09!625;CL:0000220!2.03e-08!246;CL:0002321!5.75e-08!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.16e-10;32!CL:0000192;2.12e-10;43!CL:0000187;1.42e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.15e-14,121;CL:0000192,7.41e-14,43;CL:0000514,7.41e-14,43;CL:0000680,1.33e-13,58;CL:0000056,1.33e-13,58;CL:0000355,1.33e-13,58;CL:0000187,1.50e-13,55;CL:0000057,2.92e-12,76;CL:0000359,4.06e-11,32;CL:0000393,6.15e-10,61;CL:0000211,6.15e-10,61;CL:0002321,3.14e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.12e-10;43!CL:0000355;1.29e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.64e-15!84;UBERON:0000486!2.40e-13!82;UBERON:0001009!6.13e-13!113;UBERON:0003914!1.08e-12!118;UBERON:0000914!1.08e-12!83;UBERON:0002329!1.08e-12!83;UBERON:0003077!1.08e-12!83;UBERON:0003059!1.08e-12!83;UBERON:0007282!1.08e-12!83;UBERON:0009618!1.08e-12!83;UBERON:0007285!1.08e-12!83;UBERON:0005256!1.15e-12!143;UBERON:0004535!1.48e-12!110;UBERON:0004290!2.26e-12!70;UBERON:0002049!3.72e-12!79;UBERON:0007798!3.72e-12!79;UBERON:0002385!5.30e-12!63;UBERON:0001015!5.30e-12!63;UBERON:0000383!5.30e-12!63;UBERON:0001637!1.09e-11!42;UBERON:0003509!1.09e-11!42;UBERON:0004572!1.09e-11!42;UBERON:0001134!1.32e-11!61;UBERON:0002036!1.32e-11!61;UBERON:0003082!1.32e-11!61;UBERON:0001981!2.01e-11!60;UBERON:0007500!2.01e-11!60;UBERON:0004537!2.01e-11!60;UBERON:0006965!2.01e-11!60;UBERON:0000475!7.74e-11!365;UBERON:0002100!1.24e-10!216;UBERON:0000055!1.62e-10!69;UBERON:0004573!1.06e-09!33;UBERON:0004571!1.06e-09!33;UBERON:0000468!2.12e-09!659;UBERON:0000467!9.19e-09!625;UBERON:0000480!1.59e-08!626;UBERON:0003102!4.86e-08!95;UBERON:0002199!1.25e-07!45;UBERON:0002416!1.25e-07!45;UBERON:0000926!1.61e-07!448;UBERON:0004120!1.61e-07!448;UBERON:0006603!1.61e-07!448;UBERON:0000119!3.03e-07!312;UBERON:0003081!3.17e-07!216;UBERON:0004923!4.54e-07!57;UBERON:0000483!6.93e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.79e-09;33!UBERON:0004571;8.79e-09;33!UBERON:0001637;2.30e-08;42!UBERON:0003509;2.30e-08;42!UBERON:0004572;2.30e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.23e-15,83;UBERON:0007503,6.42e-15,78;UBERON:0000486,1.23e-13,83;UBERON:0000926,8.48e-13,315;UBERON:0004120,8.48e-13,315;UBERON:0006603,8.48e-13,315;UBERON:0002329,1.16e-12,71;UBERON:0003059,1.16e-12,71;UBERON:0007282,1.16e-12,71;UBERON:0004290,1.16e-12,71;UBERON:0009618,1.16e-12,71;UBERON:0001009,1.40e-12,112;UBERON:0003914,2.00e-12,117;UBERON:0003077,2.15e-12,72;UBERON:0007285,2.15e-12,72;UBERON:0002385,2.69e-12,64;UBERON:0001015,2.69e-12,64;UBERON:0000383,2.69e-12,64;UBERON:0004535,3.35e-12,109;UBERON:0007524,3.81e-12,73;UBERON:0001134,6.76e-12,62;UBERON:0002036,6.76e-12,62;UBERON:0003082,6.76e-12,62;UBERON:0002049,8.95e-12,78;UBERON:0007798,8.95e-12,78;UBERON:0001637,1.09e-11,42;UBERON:0003509,1.09e-11,42;UBERON:0004572,1.09e-11,42;UBERON:0007500,5.02e-11,59;UBERON:0001981,5.02e-11,59;UBERON:0004537,5.02e-11,59;UBERON:0006965,5.02e-11,59;UBERON:0005256,1.46e-10,122;UBERON:0003104,1.75e-10,160;UBERON:0009142,1.75e-10,160;UBERON:0000055,3.81e-10,68;UBERON:0002100,5.23e-10,199;UBERON:0004573,1.06e-09,33;UBERON:0004571,1.06e-09,33;UBERON:0003102,2.91e-08,99;UBERON:0002199,6.48e-08,46;UBERON:0002416,6.48e-08,46;UBERON:0000490,1.37e-07,148;UBERON:0000119,1.53e-07,309;UBERON:0004923,3.29e-07,66;UBERON:0000483,3.57e-07,306;UBERON:0000479,6.68e-07,773 | |||
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| ||
|short_description=p1@ARHGAP1 | |short_description=p1@ARHGAP1 | ||
}} | }} |
Latest revision as of 03:33, 18 September 2015
Short description: | p1@ARHGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP1_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000311956, ENST00000443332, ENST00000524594, ENST00000529960, NM_004308, uc001ndd.2, uc009yle.1, uc009ylf.1_5end |
EntrezGene: | ARHGAP1 |
HGNC: | 673 |
UniProt: | Q07960E9PCG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.15e-14 | 121 |
smooth muscle cell | 7.41e-14 | 43 |
smooth muscle myoblast | 7.41e-14 | 43 |
muscle precursor cell | 1.33e-13 | 58 |
myoblast | 1.33e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-13 | 58 |
muscle cell | 1.50e-13 | 55 |
fibroblast | 2.92e-12 | 76 |
vascular associated smooth muscle cell | 4.06e-11 | 32 |
electrically responsive cell | 6.15e-10 | 61 |
electrically active cell | 6.15e-10 | 61 |
embryonic cell | 3.14e-08 | 250 |