FFCP PHASE1:Hg19::chr11:844406..844448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7106 | |EntrezGene=7106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11859 | |HGNC=11859 | ||
|TSSclassifier=strong | |||
|UniProt=O14817 | |UniProt=O14817 | ||
|association_with_transcript=0bp_to_ENST00000397404,NM_001025237,uc001lsj.1_5end | |association_with_transcript=0bp_to_ENST00000397404,NM_001025237,uc001lsj.1_5end | ||
|cluster_id=chr11:844406..844448,+ | |||
|coexpression_cluster_id=C1353 | |||
|description=CAGE_peak_4_at_TSPAN4_5end | |description=CAGE_peak_4_at_TSPAN4_5end | ||
|id=chr11:844406..844448,+ | |id=chr11:844406..844448,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.50e-29!180;CL:0000222!8.09e-24!119;CL:0000057!5.33e-17!75;CL:0002321!1.64e-16!248;CL:0000220!2.50e-16!246;CL:0000192!2.92e-15!42;CL:0000514!2.92e-15!42;CL:0000183!5.31e-15!59;CL:0000680!7.09e-15!57;CL:0000056!7.09e-15!57;CL:0000355!7.09e-15!57;CL:0000187!2.73e-14!54;CL:0000393!1.00e-12!60;CL:0000211!1.00e-12!60;CL:0000359!2.10e-12!32;CL:0000213!3.12e-09!57;CL:0000215!3.12e-09!57;CL:0000136!1.26e-08!15;CL:0002620!9.09e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.50e-29!180;CL:0000222!8.09e-24!119;CL:0000057!5.33e-17!75;CL:0002321!1.64e-16!248;CL:0000220!2.50e-16!246;CL:0000192!2.92e-15!42;CL:0000514!2.92e-15!42;CL:0000183!5.31e-15!59;CL:0000680!7.09e-15!57;CL:0000056!7.09e-15!57;CL:0000355!7.09e-15!57;CL:0000187!2.73e-14!54;CL:0000393!1.00e-12!60;CL:0000211!1.00e-12!60;CL:0000359!2.10e-12!32;CL:0000213!3.12e-09!57;CL:0000215!3.12e-09!57;CL:0000136!1.26e-08!15;CL:0002620!9.09e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.43e-12;32!CL:0000192;4.52e-11;43!CL:0000136;3.54e-09;13!CL:0000187;9.13e-08;55!CL:0000057;1.83e-07;73!CL:0002620;8.68e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.95e-24,121;CL:0000057,2.44e-18,76;CL:0000192,3.55e-15,43;CL:0000514,3.55e-15,43;CL:0000680,2.85e-14,58;CL:0000056,2.85e-14,58;CL:0000355,2.85e-14,58;CL:0002321,4.61e-14,250;CL:0000187,1.20e-13,55;CL:0000359,5.07e-13,32;CL:0000393,3.50e-12,61;CL:0000211,3.50e-12,61;CL:0000213,3.58e-10,58;CL:0000215,3.58e-10,58;CL:0000136,4.98e-09,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.52e-11;43!CL:0000355;9.48e-08;58!CL:0000222;4.65e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.39e-22!216;UBERON:0005256!3.39e-21!143;UBERON:0003914!6.86e-20!118;UBERON:0004872!3.92e-18!84;UBERON:0000490!6.12e-18!138;UBERON:0002049!1.94e-16!79;UBERON:0007798!1.94e-16!79;UBERON:0000055!2.00e-16!69;UBERON:0003104!2.40e-16!238;UBERON:0009142!2.40e-16!238;UBERON:0000914!3.78e-16!83;UBERON:0002329!3.78e-16!83;UBERON:0003077!3.78e-16!83;UBERON:0003059!3.78e-16!83;UBERON:0007282!3.78e-16!83;UBERON:0009618!3.78e-16!83;UBERON:0007285!3.78e-16!83;UBERON:0000475!1.02e-15!365;UBERON:0001981!1.24e-15!60;UBERON:0007500!1.24e-15!60;UBERON:0004537!1.24e-15!60;UBERON:0006965!1.24e-15!60;UBERON:0004290!2.49e-15!70;UBERON:0001134!1.65e-14!61;UBERON:0002036!1.65e-14!61;UBERON:0003082!1.65e-14!61;UBERON:0002385!3.93e-14!63;UBERON:0001015!3.93e-14!63;UBERON:0000383!3.93e-14!63;UBERON:0000486!1.18e-13!82;UBERON:0001637!1.80e-13!42;UBERON:0003509!1.80e-13!42;UBERON:0004572!1.80e-13!42;UBERON:0000481!6.47e-13!347;UBERON:0000119!7.80e-12!312;UBERON:0000483!1.34e-11!309;UBERON:0000477!4.02e-11!286;UBERON:0004573!5.06e-11!33;UBERON:0004571!5.06e-11!33;UBERON:0000468!5.75e-11!659;UBERON:0004535!7.89e-11!110;UBERON:0001009!1.76e-10!113;UBERON:0009569!4.58e-10!113;UBERON:0003102!1.31e-08!95;UBERON:0004111!1.45e-08!241;UBERON:0000467!3.69e-08!625;UBERON:0000480!5.83e-08!626;UBERON:0000926!2.15e-07!448;UBERON:0004120!2.15e-07!448;UBERON:0006603!2.15e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.46e-10;33!UBERON:0004571;1.46e-10;33!UBERON:0001637;5.77e-10;42!UBERON:0003509;5.77e-10;42!UBERON:0004572;5.77e-10;42!UBERON:0007500;3.22e-09;56!UBERON:0001981;3.22e-09;56!UBERON:0004537;3.22e-09;56!UBERON:0000055;6.28e-09;65!UBERON:0003914;1.03e-08;74!UBERON:0002049;3.78e-07;75!UBERON:0007798;3.78e-07;75!UBERON:0002384;8.17e-07;198!UBERON:0000947;8.56e-07;21!UBERON:0010191;8.56e-07;21 | |||
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| ||
|short_description=p4@TSPAN4 | |short_description=p4@TSPAN4 | ||
}} | }} |
Latest revision as of 20:09, 24 September 2015
Short description: | p4@TSPAN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TSPAN4_5end |
Coexpression cluster: | C1353_Mesenchymal_Preadipocyte_basal_Adipocyte_Fibroblast_Smooth_leiomyoma |
Association with transcript: | 0bp_to_ENST00000397404, NM_001025237, uc001lsj.1_5end |
EntrezGene: | TSPAN4 |
HGNC: | 11859 |
UniProt: | O14817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.95e-24 | 121 |
fibroblast | 2.44e-18 | 76 |
smooth muscle cell | 3.55e-15 | 43 |
smooth muscle myoblast | 3.55e-15 | 43 |
muscle precursor cell | 2.85e-14 | 58 |
myoblast | 2.85e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.85e-14 | 58 |
embryonic cell | 4.61e-14 | 250 |
muscle cell | 1.20e-13 | 55 |
vascular associated smooth muscle cell | 5.07e-13 | 32 |
electrically responsive cell | 3.50e-12 | 61 |
electrically active cell | 3.50e-12 | 61 |
lining cell | 3.58e-10 | 58 |
barrier cell | 3.58e-10 | 58 |
fat cell | 4.98e-09 | 15 |