FFCP PHASE1:Mm9::chr16:93368498..93368512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=85 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:93368498..93368512,+ | |||
|description=CAGE_peak_at_chr16:93368498..93368512,+ | |description=CAGE_peak_at_chr16:93368498..93368512,+ | ||
|id=chr16:93368498..93368512,+ | |id=chr16:93368498..93368512,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.45e-09!9;CL:0002251!2.45e-09!9;CL:0000066!3.96e-08!25;CL:0000239!1.13e-07!6;CL:0000677!1.13e-07!6;CL:0000212!1.13e-07!6;CL:0000584!1.13e-07!6;CL:0000223!5.63e-07!20 | |ontology_enrichment_celltype=CL:0002563!2.45e-09!9;CL:0002251!2.45e-09!9;CL:0000066!3.96e-08!25;CL:0000239!1.13e-07!6;CL:0000677!1.13e-07!6;CL:0000212!1.13e-07!6;CL:0000584!1.13e-07!6;CL:0000223!5.63e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.05e-11,6;CL:0000677,5.05e-11,6;CL:0000584,5.05e-11,6;CL:0000075,2.49e-09,7;CL:0002563,4.48e-07,9;CL:0002251,4.48e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.34e-37!59;UBERON:0000160!2.91e-36!43;UBERON:0001007!4.85e-27!128;UBERON:0001555!4.85e-27!128;UBERON:0007026!4.85e-27!128;UBERON:0004119!2.55e-26!130;UBERON:0000925!2.55e-26!130;UBERON:0006595!2.55e-26!130;UBERON:0004921!3.17e-25!126;UBERON:0004185!3.17e-25!126;UBERON:0002108!1.16e-19!16;UBERON:0001264!3.01e-16!12;UBERON:0003922!3.01e-16!12;UBERON:0002114!3.01e-16!12;UBERON:0003923!3.01e-16!12;UBERON:0003924!3.01e-16!12;UBERON:0003921!3.01e-16!12;UBERON:0000344!6.51e-15!15;UBERON:0001045!1.14e-14!13;UBERON:0001242!5.59e-13!13;UBERON:0000060!5.59e-13!13;UBERON:0001262!5.59e-13!13;UBERON:0004786!5.59e-13!13;UBERON:0002075!6.52e-12!19;UBERON:0004923!2.92e-10!24;UBERON:0000481!1.52e-09!230;UBERON:0003350!2.45e-09!9;UBERON:0004808!2.45e-09!9;UBERON:0001277!2.45e-09!9;UBERON:0001041!1.10e-08!92;UBERON:0005177!1.01e-07!85;UBERON:0000077!1.07e-07!97;UBERON:0000485!3.12e-07!11;UBERON:0000949!3.19e-07!72;UBERON:0002107!3.61e-07!22;UBERON:0007499!3.61e-07!22;UBERON:0006925!3.61e-07!22;UBERON:0009497!3.61e-07!22;UBERON:0000015!3.61e-07!22;UBERON:0002423!3.61e-07!22;UBERON:0006235!3.61e-07!22;UBERON:0008835!3.61e-07!22;UBERON:0003894!3.61e-07!22;UBERON:0004161!3.61e-07!22;UBERON:0008836!3.61e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.71e-24,12;UBERON:0000160,4.50e-22,31;UBERON:0005409,4.59e-19,47;UBERON:0002075,1.35e-16,19;UBERON:0000344,4.43e-15,15;UBERON:0001242,2.91e-12,13;UBERON:0001262,2.91e-12,13;UBERON:0004786,2.91e-12,13;UBERON:0004923,4.72e-10,24;UBERON:0001007,6.19e-09,116;UBERON:0001555,6.19e-09,116;UBERON:0007026,6.19e-09,116;UBERON:0004119,1.19e-08,118;UBERON:0000925,1.19e-08,118;UBERON:0006595,1.19e-08,118;UBERON:0004921,1.23e-07,114;UBERON:0003350,4.48e-07,9;UBERON:0004808,4.48e-07,9;UBERON:0001277,4.48e-07,9;UBERON:0002323,7.00e-07,37;UBERON:0004458,7.00e-07,37 | |||
|phase1_expression=0,3.83872948403297,5.91499011206397,2.11724947914781,4.50806156951712,4.19698179779725,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,2.98232065387321,2.29692785646008,1.29228598847722,3.44753972297422,1.71021077510736,2.01624103807945,4.21287970245079,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0.539703191637817,3.24888208723835,5.82434953226536,1.54488862144927,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0.608930956624282,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.58670339998127,0,0,1.80414445850931,4.84040459096022,1.77902435075896,1.52180500890047,3.79623249235609,0,3.2673577144035,1.39269530428806,2.72949721966768,1.79763881730844,0.648414149624083,2.19055400579804,0,0.342745537829186,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.493588655687202,4.44678940630723,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.549122826376163,0,0.372140947668503,0.936113019343682,0.505157755894224,1.97337154874103,6.75420929908714,0,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.8058956521877,4.12727081463468,20.2556783166383,49.6031359758012,40.4563593246659,64.8688162161687,17.573123935439,38.8981090540931,35.2932404600874,40.4527050157844,39.0048851727495,48.4737053266478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,3.92135049130123,0.740778109478847,0,0,0,0,0,0,0.954670618015114,0,6.50622294805916,3.34816556547584,1.25452977608681,0.87345025498471,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,3.83872948403297,5.91499011206397,2.11724947914781,4.50806156951712,4.19698179779725,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,2.98232065387321,2.29692785646008,1.29228598847722,3.44753972297422,1.71021077510736,2.01624103807945,4.21287970245079,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0.539703191637817,3.24888208723835,5.82434953226536,1.54488862144927,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0.608930956624282,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.58670339998127,0,0,1.80414445850931,4.84040459096022,1.77902435075896,1.52180500890047,3.79623249235609,0,3.2673577144035,1.39269530428806,2.72949721966768,1.79763881730844,0.648414149624083,2.19055400579804,0,0.342745537829186,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.493588655687202,4.44678940630723,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.549122826376163,0,0.372140947668503,0.936113019343682,0.505157755894224,1.97337154874103,6.75420929908714,0,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.8058956521877,4.12727081463468,20.2556783166383,49.6031359758012,40.4563593246659,64.8688162161687,17.573123935439,38.8981090540931,35.2932404600874,40.4527050157844,39.0048851727495,48.4737053266478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,3.92135049130123,0.740778109478847,0,0,0,0,0,0,0.954670618015114,0,6.50622294805916,3.34816556547584,1.25452977608681,0.87345025498471,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p@chr16:93368498..93368512,+ | |short_description=p@chr16:93368498..93368512,+ | ||
}} | }} |
Latest revision as of 05:35, 4 August 2015
Short description: | p@chr16:93368498..93368512, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:93368498..93368512, + |
Coexpression cluster: | MCL_coexpression_mm9:85 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.05e-11 | 6 |
gut absorptive cell | 5.05e-11 | 6 |
enterocyte | 5.05e-11 | 6 |
columnar/cuboidal epithelial cell | 2.49e-09 | 7 |
intestinal epithelial cell | 4.48e-07 | 9 |
epithelial cell of alimentary canal | 4.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pancreas | 2.71e-24 | 12 |
intestine | 4.50e-22 | 31 |
gastrointestinal system | 4.59e-19 | 47 |
viscus | 1.35e-16 | 19 |
mucosa | 4.43e-15 | 15 |
intestinal mucosa | 2.91e-12 | 13 |
wall of intestine | 2.91e-12 | 13 |
gastrointestinal system mucosa | 2.91e-12 | 13 |
organ component layer | 4.72e-10 | 24 |
digestive system | 6.19e-09 | 116 |
digestive tract | 6.19e-09 | 116 |
primitive gut | 6.19e-09 | 116 |
endoderm-derived structure | 1.19e-08 | 118 |
endoderm | 1.19e-08 | 118 |
presumptive endoderm | 1.19e-08 | 118 |
subdivision of digestive tract | 1.23e-07 | 114 |
epithelium of mucosa | 4.48e-07 | 9 |
gastrointestinal system epithelium | 4.48e-07 | 9 |
intestinal epithelium | 4.48e-07 | 9 |
body cavity | 7.00e-07 | 37 |
body cavity or lining | 7.00e-07 | 37 |