FFCP PHASE1:Mm9::chr17:71202822..71202877,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21815 | |EntrezGene=21815 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=P70284,Q3TVD4 | |UniProt=P70284,Q3TVD4 | ||
|association_with_transcript=0bp_to_NM_001164074,uc008dlr.2_5end | |association_with_transcript=0bp_to_NM_001164074,uc008dlr.2_5end | ||
|cluster_id=chr17:71202822..71202877,- | |||
|description=CAGE_peak_3_at_Tgif1_5end | |description=CAGE_peak_3_at_Tgif1_5end | ||
|id=chr17:71202822..71202877,- | |id=chr17:71202822..71202877,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.52e-11!24;UBERON:0005156!4.90e-11!26;UBERON:0000990!4.90e-11!26;UBERON:0000991!3.86e-09!18;UBERON:0005564!3.86e-09!18;UBERON:0004176!1.24e-08!17;UBERON:0009196!1.24e-08!17;UBERON:0009117!1.24e-08!17;UBERON:0003135!2.33e-08!15;UBERON:0000473!8.40e-08!14;UBERON:0003101!3.04e-07!16;UBERON:0000079!3.04e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,6.96e-12,24;UBERON:0005156,2.21e-11,26;UBERON:0000990,2.21e-11,26;UBERON:0000991,2.13e-09,18;UBERON:0005564,2.13e-09,18;UBERON:0004176,7.14e-09,17;UBERON:0009196,7.14e-09,17;UBERON:0009117,7.14e-09,17;UBERON:0003135,1.37e-08,15;UBERON:0000473,5.14e-08,14;UBERON:0003101,1.84e-07,16;UBERON:0000079,1.84e-07,16 | |||
|phase1_expression=4.64431656603902,1.39590163055744,1.81999695755814,3.62957053568196,2.50447864973174,2.35030980676646,2.10251376535973,8.00564605337773,58.4273196929417,55.0051636856685,48.4546850078179,27.9202556483677,2.39681021903688,1.74840804837995,0.333109761815663,0.809901069559304,0.699561878128147,6.30924330716475,6.85572168028694,8.06340338416257,11.7359740408476,0.297872853602656,0.261199789138935,2.07990149631429,2.06468352960453,1.72269589234506,0,1.939241094173,2.66032787238923,1.26015064879965,1.77384408524244,2.54012269383853,0.61506478758457,0,4.62162591602039,2.82598897109437,3.87921776898501,0,0,0,1.17646297606203,0,1.94204141212461,2.7697299954627,3.14268486780495,2.75320128242522,0,0.65407546914134,3.07560655828261,0.972149495371417,1.1198913730029,1.43752564364972,49.1603035749168,20.3101399763176,13.1076581665561,1.80081605225163,1.71920063963254,1.54701627683233,3.03474691289397,2.64495489636016,1.26766280701236,1.69422266034566,0,17.5480444869873,15.8218618010716,22.0248835633291,5.69240209984969,3.84218305321555,0.725827286159344,0.405017814995072,1.05162480675691,0.285650984403804,0,0.489963196859816,0.479227355091182,0.919218786610021,0,0.255374676170375,0.153606533256243,0.659431438650969,1.46380229763855,0.52091337055676,0.279182999001381,0.56276261003168,0,0.589257170947335,0.284743361598206,0.745597783301202,3.48340489332647,3.6274348851257,3.18850937571846,0,9.51959867190851,1.07940638327563,0,0.448026887097336,2.38755514223978,2.38602451609281,1.03914401841148,0.70667914902068,4.92951969218382,0,0,0,4.11332977921307,4.30711771307668,3.53867111510348,1.48439043634778,7.50919862576798,1.92974780784272,1.90833859442749,2.74018930480927,1.61430848079241,2.41156224884196,2.93971767839262,2.76466500925286,2.96633961281249,1.01219549843938,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,5.59175283654366,0.292780797011547,0.41889341362691,1.78819938646014,5.15205035375457,3.59941638596045,5.97230067243404,0.299581278809645,0.457500602818626,0.376963056338593,0,0.255715457330331,0.20778804455956,0.648965052271031,5.70300437561771,3.85661608891288,9.60346482047964,2.52530227063769,8.58794923553845,3.67843367093557,4.50155324513373,1.80845781402858,2.4493139694478,2.94661556655154,2.99845518591132,1.03481348295606,9.91612767491074,10.5899404893979,3.87092473160687,3.06874025398605,3.89266148915837,2.43776516565517,3.2925141825271,8.16040493955822,7.02213187313235,4.11756651383544,5.39910648851626,2.69263504296152,2.81431271977315,1.08037236876609,1.65721314909647,0.590292695242212,0.154267112887378,0.930135779001631,0,0.700592054203017,0.822799249567402,0.820837320395476,0.243206428637567,0.438599962275997,0.658650345873152,1.07365135008297,0.210289948564127,1.02904612379284,2.64335026387038,3.43785736662608,6.39864751605702,5.34144345279009,1.67527699718721,2.01683524623343,1.55664630691409,1.14135375667535,0.949058123089023,3.45867804920423,4.02136334080431,2.78539060857611,4.67913809085888,0.898819408654221,2.37751854862164,1.99141273254367,8.15571974098251,2.74196430263349,4.50830942692322,1.83286195060783,2.71533482034676,3.08597607517402,3.16182685621286,2.06654207171443,1.8839847340965,2.83813477020141,1.1858105083486,0.83422552858047,1.17935397067922,0.449724224769707,0.608580364165509,0.482354319504834,1.01850340712568,0.575392274901621,0.972811360650212,0.549122826376163,0,1.86070473834252,0.624075346229121,0.505157755894224,0.896987067609561,1.4473305640901,2.58654466233247,5.11626811780309,3.7481944581666,3.90413697282933,2.34690248288502,2.84760637651087,1.6663054862021,2.34160377429359,1.7339865851681,2.21464689648775,2.07291199254733,0.81931657357869,1.20879487306127,2.02508682014116,40.7136466636035,27.1952841909355,1.96705709207614,1.65562047782839,0,0.117211686592203,4.42624352517024,4.54447668967871,1.26203287766503,1.56175497718655,1.07711698866399,2.38968797952552,4.01037613348309,3.11384183867716,4.04810701674894,2.92255857911312,1.97643888973262,0.642642632843614,5.53566332312248,3.5613120733451,5.21238269931443,10.0631775013247,3.98235415019888,2.18502572539483,0.906970670894253,0.754420319023592,0.885905678642318,1.84461088766356,1.29214146584111,2.18120237686503,1.06949213515416,1.26414703174326,2.10837217149998,0,1.36175842301515,5.94201610303324,4.78627129996192,1.92903331528433,0.886701168211368,1.24858172321449,0.987294123612726,0.913394847343798,4.22409074514679,8.89694697628045,0.441056796109924,7.58476763530808,7.58882805470756,7.84068024066026,8.95292580023523,5.0883678920969,0.874442509889552,0.556275906031529,1.36696704638282,1.23832120777933,1.11116716421827,1.50694765603753,1.36694227721025,1.14389086603261,6.79913719975421,9.37674730568509,7.32459861163446,1.90934123603023,6.01038387804157,3.04979200690273,2.26811215725783,2.09088296014469,1.9652630737156,0.809186078308924,2.89287095038676,2.09404753587224,3.6292192521702,1.86401793926078,48.4775927268404,10.1671251309906,11.4166358415397,5.83353565032143,5.29555276258697,6.75824501963113,6.33729088687071,8.33308063001281,6.71099804324549,35.2712816405969,36.5798107947489,1.58005560314089,0.810900861160657,2.05421914329655,1.68897069871134,0.537080087002444,1.19208812868759,0.360586348559907,1.32920574457119,0.100966449948148,0.304827226619999,0.403304740547362,1.07203668813728,0.192423683280659,0.935015217452552,2.94749498699775,9.32341004171072,3.94740969081693,4.19711540910196,3.86379188064381,3.37828455812128,12.454310450174,5.14484109789758,4.01257683228291,0,0,0,0,0,0,0,0,0.453142408984205,0,9.44464863016008,7.58147259461959,5.29274177837816,1.94485373654635,2.30574478890781,0.551530525350042,1.77797382241292,2.47242068686673,1.60459604795908,1.51618327058278,0.760437899670719,0.754505365544305,1.87283014939765,1.6646539625266,0.976402972245426,0.476293691283074,0.579421629724277,1.92909220463705,1.64834360321323,1.17759136107518,0.342869252385415,1.59728225543404,0.953744759789284,1.0174249164263,0.846984423737976,1.18460451048347,0.73171189149109,0.263069711437843,0.950628796921032,1.68342681497322,0.949080144993393,1.28055827088233,0.409231043169689,0.77468420592983,1.54325288784913,1.49886346762768,2.8071793013449,3.43793686477277,2.10417165275728,1.54413993383661,0.463735671240843 | |phase1_expression=4.64431656603902,1.39590163055744,1.81999695755814,3.62957053568196,2.50447864973174,2.35030980676646,2.10251376535973,8.00564605337773,58.4273196929417,55.0051636856685,48.4546850078179,27.9202556483677,2.39681021903688,1.74840804837995,0.333109761815663,0.809901069559304,0.699561878128147,6.30924330716475,6.85572168028694,8.06340338416257,11.7359740408476,0.297872853602656,0.261199789138935,2.07990149631429,2.06468352960453,1.72269589234506,0,1.939241094173,2.66032787238923,1.26015064879965,1.77384408524244,2.54012269383853,0.61506478758457,0,4.62162591602039,2.82598897109437,3.87921776898501,0,0,0,1.17646297606203,0,1.94204141212461,2.7697299954627,3.14268486780495,2.75320128242522,0,0.65407546914134,3.07560655828261,0.972149495371417,1.1198913730029,1.43752564364972,49.1603035749168,20.3101399763176,13.1076581665561,1.80081605225163,1.71920063963254,1.54701627683233,3.03474691289397,2.64495489636016,1.26766280701236,1.69422266034566,0,17.5480444869873,15.8218618010716,22.0248835633291,5.69240209984969,3.84218305321555,0.725827286159344,0.405017814995072,1.05162480675691,0.285650984403804,0,0.489963196859816,0.479227355091182,0.919218786610021,0,0.255374676170375,0.153606533256243,0.659431438650969,1.46380229763855,0.52091337055676,0.279182999001381,0.56276261003168,0,0.589257170947335,0.284743361598206,0.745597783301202,3.48340489332647,3.6274348851257,3.18850937571846,0,9.51959867190851,1.07940638327563,0,0.448026887097336,2.38755514223978,2.38602451609281,1.03914401841148,0.70667914902068,4.92951969218382,0,0,0,4.11332977921307,4.30711771307668,3.53867111510348,1.48439043634778,7.50919862576798,1.92974780784272,1.90833859442749,2.74018930480927,1.61430848079241,2.41156224884196,2.93971767839262,2.76466500925286,2.96633961281249,1.01219549843938,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,5.59175283654366,0.292780797011547,0.41889341362691,1.78819938646014,5.15205035375457,3.59941638596045,5.97230067243404,0.299581278809645,0.457500602818626,0.376963056338593,0,0.255715457330331,0.20778804455956,0.648965052271031,5.70300437561771,3.85661608891288,9.60346482047964,2.52530227063769,8.58794923553845,3.67843367093557,4.50155324513373,1.80845781402858,2.4493139694478,2.94661556655154,2.99845518591132,1.03481348295606,9.91612767491074,10.5899404893979,3.87092473160687,3.06874025398605,3.89266148915837,2.43776516565517,3.2925141825271,8.16040493955822,7.02213187313235,4.11756651383544,5.39910648851626,2.69263504296152,2.81431271977315,1.08037236876609,1.65721314909647,0.590292695242212,0.154267112887378,0.930135779001631,0,0.700592054203017,0.822799249567402,0.820837320395476,0.243206428637567,0.438599962275997,0.658650345873152,1.07365135008297,0.210289948564127,1.02904612379284,2.64335026387038,3.43785736662608,6.39864751605702,5.34144345279009,1.67527699718721,2.01683524623343,1.55664630691409,1.14135375667535,0.949058123089023,3.45867804920423,4.02136334080431,2.78539060857611,4.67913809085888,0.898819408654221,2.37751854862164,1.99141273254367,8.15571974098251,2.74196430263349,4.50830942692322,1.83286195060783,2.71533482034676,3.08597607517402,3.16182685621286,2.06654207171443,1.8839847340965,2.83813477020141,1.1858105083486,0.83422552858047,1.17935397067922,0.449724224769707,0.608580364165509,0.482354319504834,1.01850340712568,0.575392274901621,0.972811360650212,0.549122826376163,0,1.86070473834252,0.624075346229121,0.505157755894224,0.896987067609561,1.4473305640901,2.58654466233247,5.11626811780309,3.7481944581666,3.90413697282933,2.34690248288502,2.84760637651087,1.6663054862021,2.34160377429359,1.7339865851681,2.21464689648775,2.07291199254733,0.81931657357869,1.20879487306127,2.02508682014116,40.7136466636035,27.1952841909355,1.96705709207614,1.65562047782839,0,0.117211686592203,4.42624352517024,4.54447668967871,1.26203287766503,1.56175497718655,1.07711698866399,2.38968797952552,4.01037613348309,3.11384183867716,4.04810701674894,2.92255857911312,1.97643888973262,0.642642632843614,5.53566332312248,3.5613120733451,5.21238269931443,10.0631775013247,3.98235415019888,2.18502572539483,0.906970670894253,0.754420319023592,0.885905678642318,1.84461088766356,1.29214146584111,2.18120237686503,1.06949213515416,1.26414703174326,2.10837217149998,0,1.36175842301515,5.94201610303324,4.78627129996192,1.92903331528433,0.886701168211368,1.24858172321449,0.987294123612726,0.913394847343798,4.22409074514679,8.89694697628045,0.441056796109924,7.58476763530808,7.58882805470756,7.84068024066026,8.95292580023523,5.0883678920969,0.874442509889552,0.556275906031529,1.36696704638282,1.23832120777933,1.11116716421827,1.50694765603753,1.36694227721025,1.14389086603261,6.79913719975421,9.37674730568509,7.32459861163446,1.90934123603023,6.01038387804157,3.04979200690273,2.26811215725783,2.09088296014469,1.9652630737156,0.809186078308924,2.89287095038676,2.09404753587224,3.6292192521702,1.86401793926078,48.4775927268404,10.1671251309906,11.4166358415397,5.83353565032143,5.29555276258697,6.75824501963113,6.33729088687071,8.33308063001281,6.71099804324549,35.2712816405969,36.5798107947489,1.58005560314089,0.810900861160657,2.05421914329655,1.68897069871134,0.537080087002444,1.19208812868759,0.360586348559907,1.32920574457119,0.100966449948148,0.304827226619999,0.403304740547362,1.07203668813728,0.192423683280659,0.935015217452552,2.94749498699775,9.32341004171072,3.94740969081693,4.19711540910196,3.86379188064381,3.37828455812128,12.454310450174,5.14484109789758,4.01257683228291,0,0,0,0,0,0,0,0,0.453142408984205,0,9.44464863016008,7.58147259461959,5.29274177837816,1.94485373654635,2.30574478890781,0.551530525350042,1.77797382241292,2.47242068686673,1.60459604795908,1.51618327058278,0.760437899670719,0.754505365544305,1.87283014939765,1.6646539625266,0.976402972245426,0.476293691283074,0.579421629724277,1.92909220463705,1.64834360321323,1.17759136107518,0.342869252385415,1.59728225543404,0.953744759789284,1.0174249164263,0.846984423737976,1.18460451048347,0.73171189149109,0.263069711437843,0.950628796921032,1.68342681497322,0.949080144993393,1.28055827088233,0.409231043169689,0.77468420592983,1.54325288784913,1.49886346762768,2.8071793013449,3.43793686477277,2.10417165275728,1.54413993383661,0.463735671240843 | ||
|short_description=p3@Tgif1 | |short_description=p3@Tgif1 | ||
}} | }} |
Latest revision as of 20:15, 26 September 2015
Short description: | p3@Tgif1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tgif1_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_NM_001164074, uc008dlr.2_5end |
EntrezGene: | Tgif1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 6.96e-12 | 24 |
reproductive structure | 2.21e-11 | 26 |
reproductive system | 2.21e-11 | 26 |
gonad | 2.13e-09 | 18 |
gonad primordium | 2.13e-09 | 18 |
external genitalia | 7.14e-09 | 17 |
indifferent external genitalia | 7.14e-09 | 17 |
indifferent gonad | 7.14e-09 | 17 |
male reproductive organ | 1.37e-08 | 15 |
testis | 5.14e-08 | 14 |
male organism | 1.84e-07 | 16 |
male reproductive system | 1.84e-07 | 16 |