FFCP PHASE1:Hg19::chr12:25054930..25054940,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |EntrezGene=586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |HGNC=976 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DQ7 | |UniProt=Q68DQ7 | ||
|association_with_transcript=289bp_to_ENST00000538118_5end | |association_with_transcript=289bp_to_ENST00000538118_5end | ||
|cluster_id=chr12:25054930..25054940,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_34_at_BCAT1_5end | |description=CAGE_peak_34_at_BCAT1_5end | ||
|id=chr12:25054930..25054940,- | |id=chr12:25054930..25054940,- | ||
|ontology_enrichment_celltype=CL:0002139!3.25e-15!24;CL:0000071!5.76e-11!18;CL:0002546!5.76e-11!18;CL:0002543!6.93e-10!6;CL:0000115!2.97e-09!35;CL:0002057!5.91e-08!42;CL:0002618!6.06e-08!3;CL:0000860!3.49e-07!45 | |ontology_enrichment_celltype=CL:0002139!3.25e-15!24;CL:0000071!5.76e-11!18;CL:0002546!5.76e-11!18;CL:0002543!6.93e-10!6;CL:0000115!2.97e-09!35;CL:0002057!5.91e-08!42;CL:0002618!6.06e-08!3;CL:0000860!3.49e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.57e-51;7!CL:0000586;9.57e-51;7!CL:0000047;2.90e-12;2!CL:0002545;2.90e-12;2!CL:0002618;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.90e-51,7;CL:0000586,7.90e-51,7;CL:0002545,3.62e-12,2;CL:0002618,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.99e-36;10!UBERON:0005564;9.99e-36;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.54e-16;22!DOID:2994;1.54e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.45e-16,22;DOID:2994,1.45e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.81e-17!94;UBERON:0001016!4.81e-17!94;UBERON:0005743!6.29e-15!86;UBERON:0001017!1.43e-12!82;UBERON:0001986!5.76e-11!18;UBERON:0004638!5.76e-11!18;UBERON:0004852!5.76e-11!18;UBERON:0001049!3.97e-10!57;UBERON:0005068!3.97e-10!57;UBERON:0006241!3.97e-10!57;UBERON:0007135!3.97e-10!57;UBERON:0003075!9.89e-09!86;UBERON:0007284!9.89e-09!86;UBERON:0002020!1.17e-08!34;UBERON:0003528!1.17e-08!34;UBERON:0002616!1.42e-08!59;UBERON:0000487!1.55e-08!22;UBERON:0000955!2.55e-08!69;UBERON:0006238!2.55e-08!69;UBERON:0004121!4.37e-08!169;UBERON:0002346!4.52e-08!90;UBERON:0001869!5.21e-08!32;UBERON:0000924!1.08e-07!173;UBERON:0006601!1.08e-07!173;UBERON:0001893!2.23e-07!34;UBERON:0006914!3.11e-07!25;UBERON:0000468!3.44e-07!659;UBERON:0000988!9.48e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.72e-44;8!UBERON:0003135;1.55e-32;11!UBERON:0000991;2.64e-17;21!UBERON:0003101;1.54e-16;22!UBERON:0000079;1.54e-16;22!UBERON:0005800;2.90e-12;2!UBERON:0001515;2.90e-12;2!UBERON:0002323;6.85e-08;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.45e-44,8;UBERON:0003135,1.37e-32,11;UBERON:0000991,2.48e-17,21;UBERON:0009196,2.48e-17,21;UBERON:0009117,2.48e-17,21;UBERON:0005564,2.48e-17,21;UBERON:0004176,1.45e-16,22;UBERON:0003101,1.45e-16,22;UBERON:0000079,1.45e-16,22;UBERON:0005800,3.62e-12,2;UBERON:0001515,3.62e-12,2;UBERON:0002323,3.98e-08,46;UBERON:0003133,8.42e-08,48;UBERON:0004458,1.20e-07,49;UBERON:0003886,5.73e-07,54 | |||
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| ||
|short_description=p34@BCAT1 | |short_description=p34@BCAT1 | ||
}} | }} |
Latest revision as of 21:54, 17 September 2015
Short description: | p34@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 289bp_to_ENST00000538118_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | Q68DQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.90e-51 | 7 |
germ cell | 7.90e-51 | 7 |
thoracic aorta endothelial cell | 3.62e-12 | 2 |
endothelial cell of umbilical vein | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.45e-44 | 8 |
male reproductive organ | 1.37e-32 | 11 |
gonad | 2.48e-17 | 21 |
indifferent external genitalia | 2.48e-17 | 21 |
indifferent gonad | 2.48e-17 | 21 |
gonad primordium | 2.48e-17 | 21 |
external genitalia | 1.45e-16 | 22 |
male organism | 1.45e-16 | 22 |
male reproductive system | 1.45e-16 | 22 |
segment of aorta | 3.62e-12 | 2 |
thoracic aorta | 3.62e-12 | 2 |
body cavity | 3.98e-08 | 46 |
reproductive organ | 8.42e-08 | 48 |
body cavity or lining | 1.20e-07 | 49 |
body cavity precursor | 5.73e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.45e-16 | 22 |
germ cell cancer | 1.45e-16 | 22 |