FFCP PHASE1:Hg19::chr12:2800274..2800303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40119 | |HGNC=40119 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000501371,uc001qkx.1_5end | |association_with_transcript=0bp_to_ENST00000501371,uc001qkx.1_5end | ||
|cluster_id=chr12:2800274..2800303,- | |||
|coexpression_cluster_id=C3275 | |||
|description=CAGE_peak_2_at_CACNA1C-AS1_5end | |description=CAGE_peak_2_at_CACNA1C-AS1_5end | ||
|id=chr12:2800274..2800303,- | |id=chr12:2800274..2800303,- | ||
|ontology_enrichment_celltype=CL:0000791!1.43e-20!18;CL:0000789!1.43e-20!18;CL:0002420!1.43e-20!18;CL:0002419!1.43e-20!18;CL:0000790!1.43e-20!18;CL:0000084!7.53e-19!25;CL:0000827!7.53e-19!25;CL:0000625!2.57e-15!11;CL:0000037!4.50e-12!172;CL:0000566!4.50e-12!172;CL:0000988!9.47e-12!182;CL:0000542!3.05e-11!53;CL:0000051!3.05e-11!53;CL:0000838!1.18e-10!52;CL:0002032!3.80e-09!165;CL:0000837!3.80e-09!165;CL:0000624!1.97e-08!6 | |ontology_enrichment_celltype=CL:0000791!1.43e-20!18;CL:0000789!1.43e-20!18;CL:0002420!1.43e-20!18;CL:0002419!1.43e-20!18;CL:0000790!1.43e-20!18;CL:0000084!7.53e-19!25;CL:0000827!7.53e-19!25;CL:0000625!2.57e-15!11;CL:0000037!4.50e-12!172;CL:0000566!4.50e-12!172;CL:0000988!9.47e-12!182;CL:0000542!3.05e-11!53;CL:0000051!3.05e-11!53;CL:0000838!1.18e-10!52;CL:0002032!3.80e-09!165;CL:0000837!3.80e-09!165;CL:0000624!1.97e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000625;4.66e-17;11!CL:0000791;1.48e-16;18!CL:0000789;1.48e-16;18!CL:0002419;1.48e-16;18!CL:0000084;2.39e-14;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.11e-17,11;CL:0000791,1.83e-16,18;CL:0000789,1.83e-16,18;CL:0002420,1.83e-16,18;CL:0002419,1.83e-16,18;CL:0000790,1.83e-16,18;CL:0000084,2.81e-14,25;CL:0000827,2.81e-14,25;CL:0000037,3.09e-11,168;CL:0000988,2.36e-10,177;CL:0002032,6.37e-08,161;CL:0000837,6.37e-08,161;CL:0000838,3.59e-07,52;CL:0000542,5.36e-07,53;CL:0000051,5.36e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.48e-16;18 | |||
|ontology_enrichment_disease=DOID:1240!4.16e-08!39;DOID:8692!8.23e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.68e-14;31!DOID:1240;1.48e-10;39!DOID:2531;1.10e-09;51!DOID:0060083;1.10e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.58e-14,31;DOID:1240,5.09e-13,39;DOID:2531,3.62e-11,51;DOID:0060083,3.62e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.51e-07!15;UBERON:0000179!1.51e-07!15;UBERON:0000463!1.51e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.98e-10;2!UBERON:0005058;6.98e-10;2!UBERON:0009113;6.98e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.76e-10,4;UBERON:0005058,4.76e-10,4;UBERON:0009113,4.76e-10,4;UBERON:0003295,4.76e-10,4;UBERON:0005562,4.76e-10,4;UBERON:0003351,7.91e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,5.87200878669694,0.553995408531877,0,0.651032612147555,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,9.25199300053181,5.04457706683382,1.58030450865046,0.590129310341499,0.393010762749165,0.822405995998037,0.501559486172034,3.58514493296949,3.31413464014313,1.94826728407911,0,0.589211814949674,0.221533894583621,1.35401931882508,0.512365278902701,0.390178042679635,0.657751618414705,1.10540007114339,0,1.18629250529648,1.07016331235885,4.18142095219907,0.793165398882963,1.14966148080576,0.34362744548263,0.506039384039006,2.22995790026868,2.60433381542567,0.950452044448374,0.903450714466637,1.27986611154418,1.24930726552346,2.60454977248419,0.821127996921047,0.403213486449465,1.87208137048455,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.929551542956147,0.621966330092223,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2536383625376,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.215714200818617,1.06727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0.764637207142375,1.70894156152249,0.952927101831156,0.822724546172388,0,0.540031437238115,0,0,0,0,0.185803175125719,0,8.53702120180969,0.318852545457645,3.99158742865633,2.48956981172077,4.86849240264931,5.19395104439289,1.12318871245384,0,0,20.0507581672054,0.677167111206413,0,0,0,3.77855879231341,0,0,0,0,0,0,0.270455678475983,1.6653598399891,14.098700508785,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,1.90012867315194,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,1.38899995946634,0,0.120596438625408,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0.941881538370149,2.99181027420282,0,0,0,0,2.70192184266644,0,0,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.417687798021821,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.687697182986169,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,1.52893493468819,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,1.79055697645231,0.237840181555137,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.837952543656503,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,1.3360870263278,4.77853477581194,0.752122617877125,0,0,0,0.103432995861895,0,0.23806443146374,6.91101335245265,8.44216114423667,0,0,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,2.61655931668334,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,5.87200878669694,0.553995408531877,0,0.651032612147555,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,9.25199300053181,5.04457706683382,1.58030450865046,0.590129310341499,0.393010762749165,0.822405995998037,0.501559486172034,3.58514493296949,3.31413464014313,1.94826728407911,0,0.589211814949674,0.221533894583621,1.35401931882508,0.512365278902701,0.390178042679635,0.657751618414705,1.10540007114339,0,1.18629250529648,1.07016331235885,4.18142095219907,0.793165398882963,1.14966148080576,0.34362744548263,0.506039384039006,2.22995790026868,2.60433381542567,0.950452044448374,0.903450714466637,1.27986611154418,1.24930726552346,2.60454977248419,0.821127996921047,0.403213486449465,1.87208137048455,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.929551542956147,0.621966330092223,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2536383625376,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.215714200818617,1.06727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0.764637207142375,1.70894156152249,0.952927101831156,0.822724546172388,0,0.540031437238115,0,0,0,0,0.185803175125719,0,8.53702120180969,0.318852545457645,3.99158742865633,2.48956981172077,4.86849240264931,5.19395104439289,1.12318871245384,0,0,20.0507581672054,0.677167111206413,0,0,0,3.77855879231341,0,0,0,0,0,0,0.270455678475983,1.6653598399891,14.098700508785,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,1.90012867315194,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,1.38899995946634,0,0.120596438625408,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0.941881538370149,2.99181027420282,0,0,0,0,2.70192184266644,0,0,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.417687798021821,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.687697182986169,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,1.52893493468819,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,1.79055697645231,0.237840181555137,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.837952543656503,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,1.3360870263278,4.77853477581194,0.752122617877125,0,0,0,0.103432995861895,0,0.23806443146374,6.91101335245265,8.44216114423667,0,0,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,2.61655931668334,0 | ||
|short_description=p2@CACNA1C-AS1 | |short_description=p2@CACNA1C-AS1 | ||
}} | }} |
Latest revision as of 00:33, 18 September 2015
Short description: | p2@CACNA1C-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CACNA1C-AS1_5end |
Coexpression cluster: | C3275_Hodgkin_acute_thymus_CD34_CD133_granulocyte_CD4 |
Association with transcript: | 0bp_to_ENST00000501371, uc001qkx.1_5end |
EntrezGene: | NA |
HGNC: | 40119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.11e-17 | 11 |
mature alpha-beta T cell | 1.83e-16 | 18 |
alpha-beta T cell | 1.83e-16 | 18 |
immature T cell | 1.83e-16 | 18 |
mature T cell | 1.83e-16 | 18 |
immature alpha-beta T cell | 1.83e-16 | 18 |
T cell | 2.81e-14 | 25 |
pro-T cell | 2.81e-14 | 25 |
hematopoietic stem cell | 3.09e-11 | 168 |
hematopoietic cell | 2.36e-10 | 177 |
hematopoietic oligopotent progenitor cell | 6.37e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.37e-08 | 161 |
lymphoid lineage restricted progenitor cell | 3.59e-07 | 52 |
lymphocyte | 5.36e-07 | 53 |
common lymphoid progenitor | 5.36e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.76e-10 | 4 |
hemolymphoid system gland | 4.76e-10 | 4 |
thymic region | 4.76e-10 | 4 |
pharyngeal gland | 4.76e-10 | 4 |
thymus primordium | 4.76e-10 | 4 |
pharyngeal epithelium | 7.91e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.58e-14 | 31 |
leukemia | 5.09e-13 | 39 |
hematologic cancer | 3.62e-11 | 51 |
immune system cancer | 3.62e-11 | 51 |