FFCP PHASE1:Hg19::chr12:2903742..2903763,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42876 | |HGNC=42876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-281bp_to_ENST00000540428_5end | |association_with_transcript=-281bp_to_ENST00000540428_5end | ||
|cluster_id=chr12:2903742..2903763,- | |||
|coexpression_cluster_id=C411 | |||
|description=CAGE_peak_3_at_CBX3P4_5end | |description=CAGE_peak_3_at_CBX3P4_5end | ||
|id=chr12:2903742..2903763,- | |id=chr12:2903742..2903763,- | ||
|ontology_enrichment_celltype=CL:0002057!3.00e-07!42 | |ontology_enrichment_celltype=CL:0002057!3.00e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.61e-26;5!CL:0000163;7.52e-15;9!CL:0000771;1.39e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.16e-26,5;CL:0002028,2.16e-26,5;CL:0000163,5.66e-15,9;CL:0000771,1.39e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.33e-19!115;UBERON:0001049!9.30e-10!57;UBERON:0005068!9.30e-10!57;UBERON:0006241!9.30e-10!57;UBERON:0007135!9.30e-10!57;UBERON:0002298!5.61e-09!8;UBERON:0002616!4.87e-08!59;UBERON:0002346!2.42e-07!90;UBERON:0002950!2.91e-07!2;UBERON:0001891!2.91e-07!2;UBERON:0009616!2.91e-07!2;UBERON:0002133!4.05e-07!2;UBERON:0003075!5.34e-07!86;UBERON:0007284!5.34e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;5.56e-16;1!UBERON:0002134;9.28e-16;1!UBERON:0005208;9.28e-16;1!UBERON:0004145;9.28e-16;1!UBERON:0005946;9.28e-16;1!UBERON:0005965;9.28e-16;1!UBERON:0002078;9.28e-16;1!UBERON:0004177;3.16e-12;5!UBERON:0005057;3.16e-12;5!UBERON:0002081;1.55e-08;2!UBERON:0002133;1.55e-08;2!UBERON:0002370;2.31e-08;2!UBERON:0005058;2.31e-08;2!UBERON:0009113;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,5.56e-16,1;UBERON:0002134,8.63e-16,1;UBERON:0005208,8.63e-16,1;UBERON:0005946,8.63e-16,1;UBERON:0005965,8.63e-16,1;UBERON:0002078,8.63e-16,1;UBERON:0004177,5.59e-09,7;UBERON:0005057,5.59e-09,7;UBERON:0002081,1.50e-08,2;UBERON:0002133,1.50e-08,2;UBERON:0010227,1.50e-08,2 | |||
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| ||
|short_description=p3@CBX3P4 | |short_description=p3@CBX3P4 | ||
}} | }} |
Latest revision as of 01:21, 18 September 2015
Short description: | p3@CBX3P4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CBX3P4_5end |
Coexpression cluster: | C411_vagina_Mast_breast_heart_CD14_aorta_liver |
Association with transcript: | -281bp_to_ENST00000540428_5end |
EntrezGene: | NA |
HGNC: | 42876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.16e-26 | 5 |
basophil mast progenitor cell | 2.16e-26 | 5 |
endocrine cell | 5.66e-15 | 9 |
eosinophil | 1.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vagina | 5.56e-16 | 1 |
tricuspid valve | 8.63e-16 | 1 |
right atrium valve | 8.63e-16 | 1 |
outflow tract of atrium | 8.63e-16 | 1 |
outflow part of right atrium | 8.63e-16 | 1 |
right cardiac atrium | 8.63e-16 | 1 |
hemopoietic organ | 5.59e-09 | 7 |
immune organ | 5.59e-09 | 7 |
cardiac atrium | 1.50e-08 | 2 |
atrioventricular valve | 1.50e-08 | 2 |
future cardiac atrium | 1.50e-08 | 2 |