FFCP PHASE1:Hg19::chr12:291556..291583,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537295,ENST00000537961_5end | |association_with_transcript=0bp_to_ENST00000537295,ENST00000537961_5end | ||
|cluster_id=chr12:291556..291583,- | |||
|description=CAGE_peak_1_at_ENST00000537295_5end,CAGE_peak_1_at_ENST00000537961_5end | |description=CAGE_peak_1_at_ENST00000537295_5end,CAGE_peak_1_at_ENST00000537961_5end | ||
|id=chr12:291556..291583,- | |id=chr12:291556..291583,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002379;8.61e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.21e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.79e-11;1!UBERON:0010227;3.40e-11;1!UBERON:0010226;8.61e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;8.61e-11;1!DOID:3565;8.61e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.21e-10,1;DOID:3565,1.21e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-38!115;UBERON:0001049!8.82e-16!57;UBERON:0005068!8.82e-16!57;UBERON:0006241!8.82e-16!57;UBERON:0007135!8.82e-16!57;UBERON:0002780!6.86e-14!41;UBERON:0001890!6.86e-14!41;UBERON:0006240!6.86e-14!41;UBERON:0000955!9.45e-14!69;UBERON:0006238!9.45e-14!69;UBERON:0002616!1.19e-13!59;UBERON:0003080!1.99e-13!42;UBERON:0003075!1.03e-12!86;UBERON:0007284!1.03e-12!86;UBERON:0001893!1.70e-12!34;UBERON:0005743!2.37e-12!86;UBERON:0001017!2.56e-12!82;UBERON:0001869!5.75e-12!32;UBERON:0002346!9.03e-12!90;UBERON:0002791!1.63e-11!33;UBERON:0002619!3.17e-11!22;UBERON:0002020!3.75e-11!34;UBERON:0003528!3.75e-11!34;UBERON:0001950!9.69e-11!20;UBERON:0000073!2.08e-10!94;UBERON:0001016!2.08e-10!94;UBERON:0000153!3.36e-10!129;UBERON:0007811!3.36e-10!129;UBERON:0000956!1.54e-09!25;UBERON:0000203!1.54e-09!25;UBERON:0000033!5.76e-09!123;UBERON:0000025!1.40e-08!194;UBERON:0003056!1.61e-08!61;UBERON:0004111!4.47e-08!241;UBERON:0001042!1.34e-07!10;UBERON:0009145!1.34e-07!10;UBERON:0000477!1.48e-07!286;UBERON:0000481!1.73e-07!347;UBERON:0004121!2.16e-07!169;UBERON:0004151!2.20e-07!3;UBERON:0000924!5.30e-07!173;UBERON:0006601!5.30e-07!173;UBERON:0006562!8.29e-07!11;UBERON:0000200!9.42e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.27e-29;3!UBERON:0002081;1.25e-20;2!UBERON:0002079;3.40e-11;1!UBERON:0002134;3.40e-11;1!UBERON:0005208;3.40e-11;1!UBERON:0004145;3.40e-11;1!UBERON:0005946;3.40e-11;1!UBERON:0005965;3.40e-11;1!UBERON:0002078;3.40e-11;1!UBERON:0002084;8.61e-11;1!UBERON:0002171;8.61e-11;1!UBERON:0002082;8.61e-11;1!UBERON:0006518;8.61e-11;1!UBERON:0008949;8.61e-11;1!UBERON:0000101;8.61e-11;1!UBERON:0002167;8.61e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.34e-29,3;UBERON:0002081,1.26e-20,2;UBERON:0010227,1.26e-20,2;UBERON:0002134,3.08e-11,1;UBERON:0005208,3.08e-11,1;UBERON:0005946,3.08e-11,1;UBERON:0005965,3.08e-11,1;UBERON:0002078,3.08e-11,1;UBERON:0002079,3.76e-11,1;UBERON:0002171,7.46e-11,1;UBERON:0006518,7.46e-11,1;UBERON:0008949,7.46e-11,1;UBERON:0000101,7.46e-11,1;UBERON:0002167,7.46e-11,1;UBERON:0002084,9.05e-11,1;UBERON:0002082,9.05e-11,1;UBERON:0010226,9.05e-11,1 | |||
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| ||
|short_description=p1@ENST00000537295,p1@ENST00000537961 | |short_description=p1@ENST00000537295,p1@ENST00000537961 | ||
}} | }} |
Latest revision as of 07:58, 24 July 2015
Short description: | p1@ENST00000537295, p1@ENST00000537961 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000537295_5end, CAGE_peak_1_at_ENST00000537961_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537295, ENST00000537961_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.21e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.34e-29 | 3 |
cardiac atrium | 1.26e-20 | 2 |
future cardiac atrium | 1.26e-20 | 2 |
tricuspid valve | 3.08e-11 | 1 |
right atrium valve | 3.08e-11 | 1 |
outflow tract of atrium | 3.08e-11 | 1 |
outflow part of right atrium | 3.08e-11 | 1 |
right cardiac atrium | 3.08e-11 | 1 |
left cardiac atrium | 3.76e-11 | 1 |
lower lobe of right lung | 7.46e-11 | 1 |
right lung lobe | 7.46e-11 | 1 |
lower lobe of lung | 7.46e-11 | 1 |
lobe of lung | 7.46e-11 | 1 |
right lung | 7.46e-11 | 1 |
heart left ventricle | 9.05e-11 | 1 |
cardiac ventricle | 9.05e-11 | 1 |
future cardiac ventricle | 9.05e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.21e-10 | 1 |
meningioma | 1.21e-10 | 1 |