FFCP PHASE1:Mm9::chr19:55967419..55967424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-417bp_to_ENSMUST00000145249_5end | |association_with_transcript=-417bp_to_ENSMUST00000145249_5end | ||
|cluster_id=chr19:55967419..55967424,+ | |||
|description=CAGE_peak_19_at_Tcf7l2_5end | |description=CAGE_peak_19_at_Tcf7l2_5end | ||
|id=chr19:55967419..55967424,+ | |id=chr19:55967419..55967424,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.90e-17,3;CL:0002610,3.97e-16,3;CL:0000117,4.52e-14,23;CL:0000337,4.52e-14,23;CL:0000540,1.60e-09,33;CL:0000047,1.60e-09,33;CL:0000031,1.60e-09,33;CL:0000404,1.60e-09,33;CL:0000120,4.62e-08,3;CL:0000393,6.56e-08,39;CL:0000211,6.56e-08,39;CL:0002319,4.40e-07,43;CL:0000221,6.71e-07,44;CL:0000133,6.71e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.97e-16,3;UBERON:0002275,3.97e-16,3;UBERON:0000369,1.10e-10,5;UBERON:0002435,1.10e-10,5;UBERON:0000204,1.10e-10,5;UBERON:0010082,1.10e-10,5;UBERON:0002420,7.62e-07,8;UBERON:0007245,7.62e-07,8;UBERON:0010009,7.62e-07,8;UBERON:0010011,7.62e-07,8;UBERON:0000454,7.62e-07,8;UBERON:0002259,9.48e-07,1;UBERON:0002314,9.48e-07,1;UBERON:0004061,9.48e-07,1;UBERON:0006777,9.48e-07,1;UBERON:0005882,9.48e-07,1 | |||
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| |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,2.042997409363,1.68967186581868,9.89147157976454,11.161492519494,10.4182674111352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0.239630249011841,0,0,2.54644086988199,0,0,0,0,1.45451631191692,0.486723789203273,0,0.497627882440372,0,0,0.390361328888111,0,0,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,0.258703370739016,0,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0,1.02891068203972,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.617068451549513,0,0,0,0,0.32833492815819,0.243206428637567,0,0,0,0,0,0.660837565967596,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0,0,0.474529061544512,0,0.754005626400808,0,0.19496408711912,1.79763881730844,1.08069024937347,0.597423819763102,0,0,0,0,0,0.280543279561274,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.549122826376163,2.87536413054709,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0,0,0,0,0.472905432318573,0,0,0,0.345369963731791,0.144649058581512,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0.631016438832513,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0.645857706783622,0.0603129249281559,0.477489376012546,0,0.582961673259701,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0.777689839750757,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.58678619322877,0,0.419437377702843,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0.228620419965,0.100826185136841,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.0897138566094757,0.335769232728157,0,0,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0,0.888986911206461,0.206035057238894,0,0.758091635291392,0.25347929989024,0.565879024158229,0.280924522409647,0.320125762024346,0.516919220600519,0,0.579421629724277,0.38581844092741,0.824171801606613,0.441596760403192,1.37147700954166,0.177475806159338,0.953744759789284,0.436039249896986,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.192906610981141,0.249810577937946,0.935726433781634,0.859484216193193,0.382576664137687,0,0.231867835620421 | ||
|short_description=p19@Tcf7l2 | |short_description=p19@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:54, 25 September 2015
Short description: | p19@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -417bp_to_ENSMUST00000145249_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.90e-17 | 3 |
raphe nuclei neuron | 3.97e-16 | 3 |
CNS neuron (sensu Vertebrata) | 4.52e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.52e-14 | 23 |
neuron | 1.60e-09 | 33 |
neuronal stem cell | 1.60e-09 | 33 |
neuroblast | 1.60e-09 | 33 |
electrically signaling cell | 1.60e-09 | 33 |
granule cell | 4.62e-08 | 3 |
electrically responsive cell | 6.56e-08 | 39 |
electrically active cell | 6.56e-08 | 39 |
neural cell | 4.40e-07 | 43 |
ectodermal cell | 6.71e-07 | 44 |
neurectodermal cell | 6.71e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.97e-16 | 3 |
reticular formation | 3.97e-16 | 3 |
corpus striatum | 1.10e-10 | 5 |
striatum | 1.10e-10 | 5 |
ventral part of telencephalon | 1.10e-10 | 5 |
future corpus striatum | 1.10e-10 | 5 |
basal ganglion | 7.62e-07 | 8 |
nuclear complex of neuraxis | 7.62e-07 | 8 |
aggregate regional part of brain | 7.62e-07 | 8 |
collection of basal ganglia | 7.62e-07 | 8 |
cerebral subcortex | 7.62e-07 | 8 |
corpora quadrigemina | 9.48e-07 | 1 |
midbrain tectum | 9.48e-07 | 1 |
neural tube mantle layer | 9.48e-07 | 1 |
tectal plate | 9.48e-07 | 1 |
neural tube alar plate | 9.48e-07 | 1 |