FFCP PHASE1:Mm9::chr1:167638123..167638139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226594 | |EntrezGene=226594 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UZA1 | |UniProt=Q3UZA1 | ||
|association_with_transcript=85bp_to_ENSMUST00000040357,ENSMUST00000097474,NM_001038846,NM_178593,uc007djj.1,uc007djk.1_5end | |association_with_transcript=85bp_to_ENSMUST00000040357,ENSMUST00000097474,NM_001038846,NM_178593,uc007djj.1,uc007djk.1_5end | ||
|cluster_id=chr1:167638123..167638139,- | |||
|description=CAGE_peak_8_at_Rcsd1_5end | |description=CAGE_peak_8_at_Rcsd1_5end | ||
|id=chr1:167638123..167638139,- | |id=chr1:167638123..167638139,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.07e-10,6;CL:0000556,8.07e-10,6;CL:0000988,7.12e-07,32;CL:0002032,7.12e-07,32;CL:0000037,7.12e-07,32;CL:0000837,7.12e-07,32;CL:0002031,9.24e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.12e-12!88;UBERON:0004872!6.84e-09!33;UBERON:0000926!1.46e-08!193;UBERON:0004120!1.46e-08!193;UBERON:0006603!1.46e-08!193;UBERON:0007100!5.55e-08!18;UBERON:0000948!5.55e-08!18;UBERON:0005498!5.55e-08!18;UBERON:0004140!5.55e-08!18;UBERON:0009881!5.55e-08!18;UBERON:0004141!5.55e-08!18;UBERON:0003084!5.55e-08!18;UBERON:0007005!5.55e-08!18;UBERON:0004139!5.55e-08!18;UBERON:0004291!5.55e-08!18;UBERON:0002193!8.72e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.67e-11,87;UBERON:0004872,9.85e-09,33;UBERON:0002204,1.43e-08,32;UBERON:0001474,5.26e-08,22;UBERON:0004765,5.26e-08,22;UBERON:0001434,5.26e-08,22;UBERON:0002193,1.52e-07,48;UBERON:0002405,1.52e-07,48;UBERON:0002371,1.81e-07,16;UBERON:0000926,8.18e-07,120;UBERON:0004120,8.18e-07,120;UBERON:0006603,8.18e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,1.267098499365,1.63845168425395,0.513653904676515,0.0797721589953364,0.513602189793617,0.699363219351979,2.6648780945253,2.83465374345756,0.699561878128147,15.6153771852328,14.3970155286026,7.63901373236454,0.680346321208558,0.297872853602656,0.261199789138935,0.639969691173627,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0.782391344348039,0,0,0,0,0,14.2615215149076,0,0.336093799142464,2.57259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,1.7997994345628,0,1.4209602298922,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,1.15945795480671,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,7.25026074212081,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.578397427679647,0.884610551949874,0.970601099684455,2.65009822152472,2.42437626567611,0,0,0,0.766371165625774,1.07833612055328,1.19980546198682,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,1.36847667671102,0.252722758433675,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0.702213187313235,0.257347907114715,0,0.414251545071004,0.938104239924385,0.540186184383045,0.23674473558521,0.590292695242212,0.771335564436891,0.697601834251224,0.268273401399619,1.16765342367169,1.31647879930784,1.14917224855367,2.51313309592153,1.46199987425332,1.75640092232841,1.61047702512446,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.658795818896044,0,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.456994050438915,1.1270773567308,1.4255592949172,0.581857461502877,0.841629838683823,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,1.47802552133284,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.952174563544055,0.780534591431195,0.472905432318573,0.664394068946325,0.637819074629948,1.47476983244164,0.518054945597687,1.59113964439663,0,1.08781136763742,0.491764273019036,0.827810238914197,0.321101179975584,0,0,3.02965112645248,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.32977250588296,0.645857706783622,0.180938774784468,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,3.93003025835061,1.03193433981611,0.185194527369712,0.753473828018764,3.2806614653046,2.74533807847827,1.5298058699447,1.11961161858926,1.24379976423981,0,0,0.406638934253697,0.108005340821801,0.627264888043406,0,0,0.330613822901344,0,0.259229946583586,0.621339313086926,0,0.598066184175915,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.295379054349154,0.504832249740738,0.381034033274999,0.403304740547362,0.194915761479505,0.481059208201647,0.584384510907845,2.0405734525369,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.888986911206461,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.320125762024346,0.34461281373368,0,0.231768651889711,0.578727661391115,1.23625770240992,0.147198920134397,0,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0,0,0.701794825336225,0.859484216193193,0.765153328275374,1.76473135295612,2.08681052058379 | |phase1_expression=0,0,0,0,0,0,0,1.67860320474049,1.267098499365,1.63845168425395,0.513653904676515,0.0797721589953364,0.513602189793617,0.699363219351979,2.6648780945253,2.83465374345756,0.699561878128147,15.6153771852328,14.3970155286026,7.63901373236454,0.680346321208558,0.297872853602656,0.261199789138935,0.639969691173627,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0.782391344348039,0,0,0,0,0,14.2615215149076,0,0.336093799142464,2.57259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,1.7997994345628,0,1.4209602298922,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,1.15945795480671,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,7.25026074212081,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.578397427679647,0.884610551949874,0.970601099684455,2.65009822152472,2.42437626567611,0,0,0,0.766371165625774,1.07833612055328,1.19980546198682,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,1.36847667671102,0.252722758433675,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0.702213187313235,0.257347907114715,0,0.414251545071004,0.938104239924385,0.540186184383045,0.23674473558521,0.590292695242212,0.771335564436891,0.697601834251224,0.268273401399619,1.16765342367169,1.31647879930784,1.14917224855367,2.51313309592153,1.46199987425332,1.75640092232841,1.61047702512446,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.658795818896044,0,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.456994050438915,1.1270773567308,1.4255592949172,0.581857461502877,0.841629838683823,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,1.47802552133284,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.952174563544055,0.780534591431195,0.472905432318573,0.664394068946325,0.637819074629948,1.47476983244164,0.518054945597687,1.59113964439663,0,1.08781136763742,0.491764273019036,0.827810238914197,0.321101179975584,0,0,3.02965112645248,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.32977250588296,0.645857706783622,0.180938774784468,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,3.93003025835061,1.03193433981611,0.185194527369712,0.753473828018764,3.2806614653046,2.74533807847827,1.5298058699447,1.11961161858926,1.24379976423981,0,0,0.406638934253697,0.108005340821801,0.627264888043406,0,0,0.330613822901344,0,0.259229946583586,0.621339313086926,0,0.598066184175915,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.295379054349154,0.504832249740738,0.381034033274999,0.403304740547362,0.194915761479505,0.481059208201647,0.584384510907845,2.0405734525369,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.888986911206461,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.320125762024346,0.34461281373368,0,0.231768651889711,0.578727661391115,1.23625770240992,0.147198920134397,0,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0,0,0.701794825336225,0.859484216193193,0.765153328275374,1.76473135295612,2.08681052058379 | ||
|short_description=p8@Rcsd1 | |short_description=p8@Rcsd1 | ||
}} | }} |
Latest revision as of 17:19, 26 September 2015
Short description: | p8@Rcsd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rcsd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 85bp_to_ENSMUST00000040357, ENSMUST00000097474, NM_001038846, NM_178593, uc007djj.1, uc007djk.1_5end |
EntrezGene: | Rcsd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.07e-10 | 6 |
megakaryocyte | 8.07e-10 | 6 |
hematopoietic cell | 7.12e-07 | 32 |
hematopoietic oligopotent progenitor cell | 7.12e-07 | 32 |
hematopoietic stem cell | 7.12e-07 | 32 |
hematopoietic multipotent progenitor cell | 7.12e-07 | 32 |
hematopoietic lineage restricted progenitor cell | 9.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.67e-11 | 87 |
splanchnic layer of lateral plate mesoderm | 9.85e-09 | 33 |
musculoskeletal system | 1.43e-08 | 32 |
bone element | 5.26e-08 | 22 |
skeletal element | 5.26e-08 | 22 |
skeletal system | 5.26e-08 | 22 |
hemolymphoid system | 1.52e-07 | 48 |
immune system | 1.52e-07 | 48 |
bone marrow | 1.81e-07 | 16 |
mesoderm | 8.18e-07 | 120 |
mesoderm-derived structure | 8.18e-07 | 120 |
presumptive mesoderm | 8.18e-07 | 120 |