FFCP PHASE1:Mm9::chr4:46151584..46151666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=433702 | |EntrezGene=433702 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UYV9 | |UniProt=Q3UYV9 | ||
|association_with_transcript=99bp_to_ENSMUST00000030014_5end | |association_with_transcript=99bp_to_ENSMUST00000030014_5end | ||
|cluster_id=chr4:46151584..46151666,+ | |||
|description=CAGE_peak_1_at_Ncbp1_5end | |description=CAGE_peak_1_at_Ncbp1_5end | ||
|id=chr4:46151584..46151666,+ | |id=chr4:46151584..46151666,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.28e-07!13;CL:0000051!2.28e-07!13;CL:0000084!2.54e-07!11;CL:0000827!2.54e-07!11;CL:0000838!3.01e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.28e-07,13;CL:0000051,2.28e-07,13;CL:0000084,2.54e-07,11;CL:0000827,2.54e-07,11;CL:0000838,3.01e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.43e-13!94;UBERON:0004177!1.07e-11!29;UBERON:0007811!1.60e-11!86;UBERON:0002370!5.99e-10!23;UBERON:0000974!5.99e-10!23;UBERON:0004807!5.99e-10!23;UBERON:0005058!5.99e-10!23;UBERON:0003351!5.99e-10!23;UBERON:0009113!5.99e-10!23;UBERON:0003295!5.99e-10!23;UBERON:0009722!5.99e-10!23;UBERON:0005562!5.99e-10!23;UBERON:0007690!5.99e-10!23;UBERON:0006562!2.19e-09!24;UBERON:0001557!2.19e-09!24;UBERON:0001042!2.19e-09!24;UBERON:0008814!2.19e-09!24;UBERON:0009145!2.19e-09!24;UBERON:0003408!6.25e-09!24;UBERON:0000072!1.03e-08!27;UBERON:0003056!5.39e-07!49;UBERON:0002390!6.80e-07!45;UBERON:0003061!6.80e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.07e-11,29;UBERON:0005057,1.07e-11,29;UBERON:0000153,2.98e-10,43;UBERON:0002370,5.99e-10,23;UBERON:0000974,5.99e-10,23;UBERON:0004807,5.99e-10,23;UBERON:0005058,5.99e-10,23;UBERON:0003351,5.99e-10,23;UBERON:0009113,5.99e-10,23;UBERON:0003295,5.99e-10,23;UBERON:0009722,5.99e-10,23;UBERON:0005562,5.99e-10,23;UBERON:0007690,5.99e-10,23;UBERON:0006562,2.19e-09,24;UBERON:0001557,2.19e-09,24;UBERON:0001042,2.19e-09,24;UBERON:0008814,2.19e-09,24;UBERON:0009145,2.19e-09,24;UBERON:0003408,6.25e-09,24;UBERON:0007811,8.51e-09,36;UBERON:0000072,1.03e-08,27;UBERON:0000077,1.53e-08,35;UBERON:0003056,5.39e-07,49;UBERON:0002390,6.80e-07,45;UBERON:0003061,6.80e-07,45 | |||
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| ||
|short_description=p1@Ncbp1 | |short_description=p1@Ncbp1 | ||
}} | }} |
Latest revision as of 01:10, 27 September 2015
Short description: | p1@Ncbp1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ncbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 99bp_to_ENSMUST00000030014_5end |
EntrezGene: | Ncbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.28e-07 | 13 |
common lymphoid progenitor | 2.28e-07 | 13 |
T cell | 2.54e-07 | 11 |
pro-T cell | 2.54e-07 | 11 |
lymphoid lineage restricted progenitor cell | 3.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.07e-11 | 29 |
immune organ | 1.07e-11 | 29 |
anterior region of body | 2.98e-10 | 43 |
thymus | 5.99e-10 | 23 |
neck | 5.99e-10 | 23 |
respiratory system epithelium | 5.99e-10 | 23 |
hemolymphoid system gland | 5.99e-10 | 23 |
pharyngeal epithelium | 5.99e-10 | 23 |
thymic region | 5.99e-10 | 23 |
pharyngeal gland | 5.99e-10 | 23 |
entire pharyngeal arch endoderm | 5.99e-10 | 23 |
thymus primordium | 5.99e-10 | 23 |
early pharyngeal endoderm | 5.99e-10 | 23 |
pharynx | 2.19e-09 | 24 |
upper respiratory tract | 2.19e-09 | 24 |
chordate pharynx | 2.19e-09 | 24 |
pharyngeal arch system | 2.19e-09 | 24 |
pharyngeal region of foregut | 2.19e-09 | 24 |
gland of gut | 6.25e-09 | 24 |
craniocervical region | 8.51e-09 | 36 |
segment of respiratory tract | 1.03e-08 | 27 |
mixed endoderm/mesoderm-derived structure | 1.53e-08 | 35 |
pre-chordal neural plate | 5.39e-07 | 49 |
hematopoietic system | 6.80e-07 | 45 |
blood island | 6.80e-07 | 45 |