FFCP PHASE1:Mm9::chr12:16807766..16807777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268527 | |EntrezGene=268527 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1101 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UHK3,E0CYD8 | |UniProt=Q3UHK3,E0CYD8 | ||
|association_with_transcript=-74bp_to_ENSMUST00000048064,ENSMUST00000161998,NM_015764,uc007nbz.1_5end | |association_with_transcript=-74bp_to_ENSMUST00000048064,ENSMUST00000161998,NM_015764,uc007nbz.1_5end | ||
|cluster_id=chr12:16807766..16807777,- | |||
|description=CAGE_peak_6_at_Greb1_5end | |description=CAGE_peak_6_at_Greb1_5end | ||
|id=chr12:16807766..16807777,- | |id=chr12:16807766..16807777,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!5.86e-15!26;UBERON:0000990!5.86e-15!26;UBERON:0003133!5.73e-13!24;UBERON:0003064!1.17e-10!14;UBERON:0002342!1.26e-10!10;UBERON:0005062!1.26e-10!10;UBERON:0000991!2.29e-10!18;UBERON:0005564!2.29e-10!18;UBERON:0002369!2.97e-10!7;UBERON:0006858!2.97e-10!7;UBERON:0004176!2.46e-09!17;UBERON:0009196!2.46e-09!17;UBERON:0009117!2.46e-09!17;UBERON:0003101!1.27e-08!16;UBERON:0000079!1.27e-08!16;UBERON:0003135!1.07e-07!15;UBERON:0000010!2.11e-07!11;UBERON:0000473!9.92e-07!14 | |ontology_enrichment_uberon=UBERON:0005156!5.86e-15!26;UBERON:0000990!5.86e-15!26;UBERON:0003133!5.73e-13!24;UBERON:0003064!1.17e-10!14;UBERON:0002342!1.26e-10!10;UBERON:0005062!1.26e-10!10;UBERON:0000991!2.29e-10!18;UBERON:0005564!2.29e-10!18;UBERON:0002369!2.97e-10!7;UBERON:0006858!2.97e-10!7;UBERON:0004176!2.46e-09!17;UBERON:0009196!2.46e-09!17;UBERON:0009117!2.46e-09!17;UBERON:0003101!1.27e-08!16;UBERON:0000079!1.27e-08!16;UBERON:0003135!1.07e-07!15;UBERON:0000010!2.11e-07!11;UBERON:0000473!9.92e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.18e-18,7;UBERON:0006858,1.18e-18,7;UBERON:0003133,9.96e-17,24;UBERON:0005156,2.34e-15,26;UBERON:0000990,2.34e-15,26;UBERON:0004176,8.25e-15,17;UBERON:0009196,8.25e-15,17;UBERON:0009117,8.25e-15,17;UBERON:0000991,5.96e-14,18;UBERON:0005564,5.96e-14,18;UBERON:0000473,2.58e-13,14;UBERON:0003064,5.73e-13,14;UBERON:0003135,2.12e-12,15;UBERON:0003101,1.34e-11,16;UBERON:0000079,1.34e-11,16;UBERON:0000926,6.92e-08,120;UBERON:0004120,6.92e-08,120;UBERON:0006603,6.92e-08,120;UBERON:0000305,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30482203287992,0.520455980298408,0.913396434936424,1.61430848079241,1.3565037649736,1.41106448562846,1.38233250462643,3.46072954828123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.257734922644187,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0.215423397732799,0.716906393857656,0.222798674082394,1.13230612315533,0.404810701674894,0.292255857911312,0,0,4.25820255624806,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,2.54178128274764,0.66183396182839,1.55560950675238,2.0665571756437,1.85851738039856,2.58185925020659,1.3020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0.375364950902364,1.46521299413812,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30482203287992,0.520455980298408,0.913396434936424,1.61430848079241,1.3565037649736,1.41106448562846,1.38233250462643,3.46072954828123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.257734922644187,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0.215423397732799,0.716906393857656,0.222798674082394,1.13230612315533,0.404810701674894,0.292255857911312,0,0,4.25820255624806,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,2.54178128274764,0.66183396182839,1.55560950675238,2.0665571756437,1.85851738039856,2.58185925020659,1.3020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0.375364950902364,1.46521299413812,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Greb1 | |short_description=p6@Greb1 | ||
}} | }} |
Latest revision as of 11:34, 26 September 2015
Short description: | p6@Greb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Greb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1101 |
Association with transcript: | -74bp_to_ENSMUST00000048064, ENSMUST00000161998, NM_015764, uc007nbz.1_5end |
EntrezGene: | Greb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.18e-18 | 7 |
adrenal/interrenal gland | 1.18e-18 | 7 |
reproductive organ | 9.96e-17 | 24 |
reproductive structure | 2.34e-15 | 26 |
reproductive system | 2.34e-15 | 26 |
external genitalia | 8.25e-15 | 17 |
indifferent external genitalia | 8.25e-15 | 17 |
indifferent gonad | 8.25e-15 | 17 |
gonad | 5.96e-14 | 18 |
gonad primordium | 5.96e-14 | 18 |
testis | 2.58e-13 | 14 |
intermediate mesoderm | 5.73e-13 | 14 |
male reproductive organ | 2.12e-12 | 15 |
male organism | 1.34e-11 | 16 |
male reproductive system | 1.34e-11 | 16 |
mesoderm | 6.92e-08 | 120 |
mesoderm-derived structure | 6.92e-08 | 120 |
presumptive mesoderm | 6.92e-08 | 120 |
amnion | 7.38e-07 | 1 |