FFCP PHASE1:Mm9::chr2:90725578..90725583,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67445 | |EntrezGene=67445 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1191 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R066 | |UniProt=Q8R066 | ||
|association_with_transcript=-359bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end | |association_with_transcript=-359bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end | ||
|cluster_id=chr2:90725578..90725583,+ | |||
|description=CAGE_peak_13_at_C1qtnf4_5end | |description=CAGE_peak_13_at_C1qtnf4_5end | ||
|id=chr2:90725578..90725583,+ | |id=chr2:90725578..90725583,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.49e-09!23;CL:0000337!3.49e-09!23;CL:0002613!8.10e-08!3 | |ontology_enrichment_celltype=CL:0000117!3.49e-09!23;CL:0000337!3.49e-09!23;CL:0002613!8.10e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.26e-16,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.71e-21!63;UBERON:0001049!1.75e-20!52;UBERON:0005068!1.75e-20!52;UBERON:0006241!1.75e-20!52;UBERON:0007135!1.75e-20!52;UBERON:0000955!5.58e-20!50;UBERON:0006238!5.58e-20!50;UBERON:0002346!1.77e-19!71;UBERON:0003075!1.77e-19!71;UBERON:0007284!1.77e-19!71;UBERON:0002616!2.53e-18!49;UBERON:0001017!6.29e-18!73;UBERON:0005743!6.29e-18!73;UBERON:0000073!2.75e-17!75;UBERON:0001016!2.75e-17!75;UBERON:0004121!9.34e-16!102;UBERON:0000924!9.34e-16!102;UBERON:0006601!9.34e-16!102;UBERON:0007811!3.16e-15!86;UBERON:0003056!8.55e-14!49;UBERON:0000153!2.12e-13!94;UBERON:0003076!4.82e-12!12;UBERON:0003057!4.82e-12!12;UBERON:0002020!2.28e-11!34;UBERON:0003080!6.33e-11!40;UBERON:0002298!1.52e-10!6;UBERON:0002780!1.29e-09!39;UBERON:0001890!1.29e-09!39;UBERON:0006240!1.29e-09!39;UBERON:0002791!2.92e-08!29;UBERON:0003528!2.92e-08!29;UBERON:0001893!2.92e-08!29;UBERON:0002420!1.56e-07!8;UBERON:0007245!1.56e-07!8;UBERON:0010009!1.56e-07!8;UBERON:0010011!1.56e-07!8;UBERON:0000454!1.56e-07!8;UBERON:0004733!6.70e-07!6;UBERON:0004732!6.70e-07!6;UBERON:0002028!6.70e-07!6;UBERON:0007277!6.70e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,6.26e-16,3;UBERON:0002275,6.26e-16,3;UBERON:0002259,5.53e-12,1;UBERON:0002314,5.53e-12,1;UBERON:0004061,5.53e-12,1;UBERON:0006777,5.53e-12,1;UBERON:0005882,5.53e-12,1;UBERON:0002950,1.33e-11,4;UBERON:0001891,1.33e-11,4;UBERON:0009616,1.33e-11,4;UBERON:0010286,1.33e-11,4;UBERON:0000073,6.33e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0000955,2.14e-08,47;UBERON:0006238,2.14e-08,47;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,3.06449611404451,2.4577045320999,0.395658863190582,0.274462930807229,0.52091337055676,1.11673199600552,0,0.45839474333043,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,0.41889341362691,0,0,0,0,1.19832511523858,0,0,0.695297280769106,0.255715457330331,2.90903262383384,1.78465389374533,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,3.06449611404451,2.4577045320999,0.395658863190582,0.274462930807229,0.52091337055676,1.11673199600552,0,0.45839474333043,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,0.41889341362691,0,0,0,0,1.19832511523858,0,0,0.695297280769106,0.255715457330331,2.90903262383384,1.78465389374533,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p13@C1qtnf4 | |short_description=p13@C1qtnf4 | ||
}} | }} |
Latest revision as of 02:23, 27 September 2015
Short description: | p13@C1qtnf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_C1qtnf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1191 |
Association with transcript: | -359bp_to_ENSMUST00000036860, NM_026161, uc008ktq.1_5end |
EntrezGene: | C1qtnf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.26e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 6.26e-16 | 3 |
reticular formation | 6.26e-16 | 3 |
corpora quadrigemina | 5.53e-12 | 1 |
midbrain tectum | 5.53e-12 | 1 |
neural tube mantle layer | 5.53e-12 | 1 |
tectal plate | 5.53e-12 | 1 |
neural tube alar plate | 5.53e-12 | 1 |
regional part of midbrain | 1.33e-11 | 4 |
midbrain | 1.33e-11 | 4 |
presumptive midbrain | 1.33e-11 | 4 |
midbrain neural tube | 1.33e-11 | 4 |
regional part of nervous system | 6.33e-10 | 54 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
brain | 2.14e-08 | 47 |
future brain | 2.14e-08 | 47 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |