FFCP PHASE1:Mm9::chr3:142210425..142210445,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2019 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:142210425..142210445,+ | |||
|description=CAGE_peak_at_chr3:142210425..142210445,+ | |description=CAGE_peak_at_chr3:142210425..142210445,+ | ||
|id=chr3:142210425..142210445,+ | |id=chr3:142210425..142210445,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.81e-08!193;UBERON:0004120!4.81e-08!193;UBERON:0006603!4.81e-08!193;UBERON:0001041!7.68e-08!92;UBERON:0005057!2.40e-07!51;UBERON:0000077!2.80e-07!97;UBERON:0004177!5.21e-07!29;UBERON:0003104!8.05e-07!131;UBERON:0009142!8.05e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,4.68e-11,80;UBERON:0009569,1.22e-10,66;UBERON:0005911,4.22e-10,69;UBERON:0000065,6.56e-10,41;UBERON:0001004,1.39e-09,42;UBERON:0005177,5.10e-08,79;UBERON:0004177,1.24e-07,29;UBERON:0005057,1.24e-07,29;UBERON:0001048,1.48e-07,134;UBERON:0002048,2.04e-07,14;UBERON:0000117,2.04e-07,14;UBERON:0000171,2.04e-07,14;UBERON:0000170,2.04e-07,14;UBERON:0005597,2.04e-07,14;UBERON:0000118,2.04e-07,14;UBERON:0004119,4.86e-07,118;UBERON:0000925,4.86e-07,118;UBERON:0006595,4.86e-07,118;UBERON:0000077,5.03e-07,35;UBERON:0002368,5.81e-07,60;UBERON:0004921,9.23e-07,114 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,1.93684985162364,0.422366166455,0.234064526321993,0.171217968225505,0,0.856003649656029,0.874204024189974,0.333109761815663,0.809901069559304,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0.794327609607082,1.04479915655574,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0,0,0.61119299110724,0,0.142371680799103,0,0.530083353332288,0.68014404096107,0.289864488701678,0,0,0.539703191637817,1.29955283489534,0,0.280888840263504,0.681721290312231,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,1.05505848386836,1.64624189989987,1.0053327306374,0.988779870937496,0.578397427679647,0,0.808834249737046,3.3126227769059,0,0,0,0.209446706813455,0.766371165625774,0.239630249011841,0,0,0.299581278809645,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0,1.52759045775474,0.497627882440372,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0.272145996605311,0,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.697601834251224,0.536546802799238,0.700592054203017,0,2.62667942526552,0.972825714550269,1.16959989940266,0.439100230582101,0.939444931322602,0,0.205809224758569,0.660837565967596,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,2.5133520880027,0.596869416123452,0.974820435595601,0.898819408654221,0.648414149624083,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.841629838683823,0.126473074248515,1.62371162777562,1.41298855057237,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,1.78348749452539,3.0201755450689,23.0029130443767,2.60498663367952,1.87222603868736,0,0.896987067609561,0.964887042726734,2.77129785249907,0,0,0.339490171550376,0,0,0.476087281772027,2.73187107000918,0.788175720530955,2.21464689648775,3.02964060449226,2.78567635016755,4.31712454664739,2.89298117163023,1.50791283939272,20.668415985111,0,0.827810238914197,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0.283880170416537,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0.329098041204242,0,1.40803024838226,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,1.19609616558497,0,0.925972636848558,2.26042148405629,1.91371918809435,0.915112692826091,1.01987057996313,0.69975726161829,0.414599921413271,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0.674321731924103,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0.675824501963113,0.821500670520278,1.0416350787516,0,0.241584120826006,0.576060012515731,0.316011120628178,1.01362607645082,1.23253148597793,2.5984164595559,0.358053391334963,0.79472541912506,0.721172697119813,2.36303243479324,0.504832249740738,1.21930890648,1.00826185136841,1.94915761479505,1.92423683280659,2.45441494581295,0.226730383615211,0.221985953374065,0,0,0.19318959403219,1.50145980360946,0.73260649706906,0,0,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0.906284817968409,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0,0,0.73171189149109,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,1.93684985162364,0.422366166455,0.234064526321993,0.171217968225505,0,0.856003649656029,0.874204024189974,0.333109761815663,0.809901069559304,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0.794327609607082,1.04479915655574,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0,0,0.61119299110724,0,0.142371680799103,0,0.530083353332288,0.68014404096107,0.289864488701678,0,0,0.539703191637817,1.29955283489534,0,0.280888840263504,0.681721290312231,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,1.05505848386836,1.64624189989987,1.0053327306374,0.988779870937496,0.578397427679647,0,0.808834249737046,3.3126227769059,0,0,0,0.209446706813455,0.766371165625774,0.239630249011841,0,0,0.299581278809645,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0,1.52759045775474,0.497627882440372,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0.272145996605311,0,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.697601834251224,0.536546802799238,0.700592054203017,0,2.62667942526552,0.972825714550269,1.16959989940266,0.439100230582101,0.939444931322602,0,0.205809224758569,0.660837565967596,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,2.5133520880027,0.596869416123452,0.974820435595601,0.898819408654221,0.648414149624083,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.841629838683823,0.126473074248515,1.62371162777562,1.41298855057237,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,1.78348749452539,3.0201755450689,23.0029130443767,2.60498663367952,1.87222603868736,0,0.896987067609561,0.964887042726734,2.77129785249907,0,0,0.339490171550376,0,0,0.476087281772027,2.73187107000918,0.788175720530955,2.21464689648775,3.02964060449226,2.78567635016755,4.31712454664739,2.89298117163023,1.50791283939272,20.668415985111,0,0.827810238914197,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0.283880170416537,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0.329098041204242,0,1.40803024838226,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,1.19609616558497,0,0.925972636848558,2.26042148405629,1.91371918809435,0.915112692826091,1.01987057996313,0.69975726161829,0.414599921413271,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0.674321731924103,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0.675824501963113,0.821500670520278,1.0416350787516,0,0.241584120826006,0.576060012515731,0.316011120628178,1.01362607645082,1.23253148597793,2.5984164595559,0.358053391334963,0.79472541912506,0.721172697119813,2.36303243479324,0.504832249740738,1.21930890648,1.00826185136841,1.94915761479505,1.92423683280659,2.45441494581295,0.226730383615211,0.221985953374065,0,0,0.19318959403219,1.50145980360946,0.73260649706906,0,0,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0.906284817968409,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0,0,0.73171189149109,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr3:142210425..142210445,+ | |short_description=p@chr3:142210425..142210445,+ | ||
}} | }} |
Latest revision as of 03:47, 6 August 2015
Short description: | p@chr3:142210425..142210445, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:142210425..142210445, + |
Coexpression cluster: | MCL_coexpression_mm9:2019 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
foregut | 4.68e-11 | 80 |
subdivision of trunk | 1.22e-10 | 66 |
endo-epithelium | 4.22e-10 | 69 |
respiratory tract | 6.56e-10 | 41 |
respiratory system | 1.39e-09 | 42 |
trunk region element | 5.10e-08 | 79 |
hemopoietic organ | 1.24e-07 | 29 |
immune organ | 1.24e-07 | 29 |
primordium | 1.48e-07 | 134 |
lung | 2.04e-07 | 14 |
respiratory tube | 2.04e-07 | 14 |
respiration organ | 2.04e-07 | 14 |
pair of lungs | 2.04e-07 | 14 |
lung primordium | 2.04e-07 | 14 |
lung bud | 2.04e-07 | 14 |
endoderm-derived structure | 4.86e-07 | 118 |
endoderm | 4.86e-07 | 118 |
presumptive endoderm | 4.86e-07 | 118 |
mixed endoderm/mesoderm-derived structure | 5.03e-07 | 35 |
endocrine gland | 5.81e-07 | 60 |
subdivision of digestive tract | 9.23e-07 | 114 |