FFCP PHASE1:Mm9::chr13:3610282..3610308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=105203 | |EntrezGene=105203 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=276 | |||
|TSSclassifier=NA | |||
|UniProt=Q5DTT3,E9PYT9,Q3TAG2 | |UniProt=Q5DTT3,E9PYT9,Q3TAG2 | ||
|association_with_transcript=45bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end | |association_with_transcript=45bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end | ||
|cluster_id=chr13:3610282..3610308,- | |||
|description=CAGE_peak_2_at_BC016423_5end | |description=CAGE_peak_2_at_BC016423_5end | ||
|id=chr13:3610282..3610308,- | |id=chr13:3610282..3610308,- | ||
|ontology_enrichment_celltype=CL:0000542!1.66e-08!13;CL:0000051!1.66e-08!13;CL:0000838!2.88e-08!12;CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000791!1.61e-07!9;CL:0000789!1.61e-07!9;CL:0002420!1.61e-07!9;CL:0002419!1.61e-07!9;CL:0000790!1.61e-07!9;CL:0000624!7.24e-07!8 | |ontology_enrichment_celltype=CL:0000542!1.66e-08!13;CL:0000051!1.66e-08!13;CL:0000838!2.88e-08!12;CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000791!1.61e-07!9;CL:0000789!1.61e-07!9;CL:0002420!1.61e-07!9;CL:0002419!1.61e-07!9;CL:0000790!1.61e-07!9;CL:0000624!7.24e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.66e-08,13;CL:0000051,1.66e-08,13;CL:0000838,2.88e-08,12;CL:0000084,1.10e-07,11;CL:0000827,1.10e-07,11;CL:0000791,1.61e-07,9;CL:0000789,1.61e-07,9;CL:0002420,1.61e-07,9;CL:0002419,1.61e-07,9;CL:0000790,1.61e-07,9;CL:0000624,7.24e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!4.96e-10!24;UBERON:0002370!1.15e-09!23;UBERON:0000974!1.15e-09!23;UBERON:0004807!1.15e-09!23;UBERON:0005058!1.15e-09!23;UBERON:0003351!1.15e-09!23;UBERON:0009113!1.15e-09!23;UBERON:0003295!1.15e-09!23;UBERON:0009722!1.15e-09!23;UBERON:0005562!1.15e-09!23;UBERON:0007690!1.15e-09!23;UBERON:0006562!3.44e-09!24;UBERON:0001557!3.44e-09!24;UBERON:0001042!3.44e-09!24;UBERON:0008814!3.44e-09!24;UBERON:0009145!3.44e-09!24;UBERON:0004177!8.01e-08!29;UBERON:0001004!1.58e-07!42;UBERON:0000065!3.34e-07!41;UBERON:0004921!4.51e-07!126;UBERON:0004185!4.51e-07!126;UBERON:0005911!7.78e-07!69;UBERON:0001007!9.61e-07!128;UBERON:0001555!9.61e-07!128;UBERON:0007026!9.61e-07!128 | |ontology_enrichment_uberon=UBERON:0003408!4.96e-10!24;UBERON:0002370!1.15e-09!23;UBERON:0000974!1.15e-09!23;UBERON:0004807!1.15e-09!23;UBERON:0005058!1.15e-09!23;UBERON:0003351!1.15e-09!23;UBERON:0009113!1.15e-09!23;UBERON:0003295!1.15e-09!23;UBERON:0009722!1.15e-09!23;UBERON:0005562!1.15e-09!23;UBERON:0007690!1.15e-09!23;UBERON:0006562!3.44e-09!24;UBERON:0001557!3.44e-09!24;UBERON:0001042!3.44e-09!24;UBERON:0008814!3.44e-09!24;UBERON:0009145!3.44e-09!24;UBERON:0004177!8.01e-08!29;UBERON:0001004!1.58e-07!42;UBERON:0000065!3.34e-07!41;UBERON:0004921!4.51e-07!126;UBERON:0004185!4.51e-07!126;UBERON:0005911!7.78e-07!69;UBERON:0001007!9.61e-07!128;UBERON:0001555!9.61e-07!128;UBERON:0007026!9.61e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,4.96e-10,24;UBERON:0002370,1.15e-09,23;UBERON:0000974,1.15e-09,23;UBERON:0004807,1.15e-09,23;UBERON:0005058,1.15e-09,23;UBERON:0003351,1.15e-09,23;UBERON:0009113,1.15e-09,23;UBERON:0003295,1.15e-09,23;UBERON:0009722,1.15e-09,23;UBERON:0005562,1.15e-09,23;UBERON:0007690,1.15e-09,23;UBERON:0006562,3.44e-09,24;UBERON:0001557,3.44e-09,24;UBERON:0001042,3.44e-09,24;UBERON:0008814,3.44e-09,24;UBERON:0009145,3.44e-09,24;UBERON:0000153,1.57e-08,43;UBERON:0007811,4.02e-08,36;UBERON:0004177,8.01e-08,29;UBERON:0005057,8.01e-08,29;UBERON:0000077,1.08e-07,35;UBERON:0001004,1.58e-07,42;UBERON:0000065,3.34e-07,41;UBERON:0005911,7.77e-07,69 | |||
|phase1_expression=7.04654927261093,7.32848356042658,10.0099832665698,9.0739263392049,9.5170188689806,12.7588246653036,13.783145795136,27.5032678930557,63.2141362460984,78.4116163178678,46.4000693891118,48.2621561921785,34.2401459862411,37.3285118329119,5.3297561890506,6.07425802169478,6.29605690315332,17.192688012024,21.8011949433125,16.9755860719212,8.1641558545027,8.24114894967348,8.35839325244593,5.75972722056264,5.27641346454491,13.7815671387605,6.03066794622705,7.75696437669201,6.08074942260396,10.837295579677,6.87364583031445,5.71527606113668,8.61090702618398,0,8.08784535303569,6.31691652362271,8.98345167554424,2.51118978442145,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,8.43508680436368,8.61703915365874,6.60768307782054,0,0.872100625521786,1.09843091367236,2.52758868796568,0.699932108126813,0,16.4426953936582,23.9369506863744,31.5928171193916,1.80081605225163,3.43840127926508,2.57836046138721,6.27181028664753,4.23192783417626,3.80298842103708,1.35537812827653,1.77858959222228,2.2497492932035,0.988866362566974,0.7104801149461,0.898800331555214,1.15265491596466,7.8804105354443,5.53524347159932,7.36137364729837,1.14260393761521,2.42955395046775,6.73699395682247,6.03826467414889,3.67687514644008,7.70811166995721,4.21368215681119,6.29786786350598,6.19865552331911,7.50198677539759,6.25096044668112,1.95428099300967,6.75315132038016,6.1119299110724,7.07108605136802,6.97621235915604,4.47358669980721,10.677393259979,4.6854367266207,9.56552812715537,4.30211938490693,4.75979933595425,5.39703191637817,7.14754059192436,6.72040330646003,6.46044332606059,4.94247935476367,1.81850203222008,3.18005617059306,7.46470124816407,10.2661181931454,17.8363667794652,21.3320010945999,2.16491041011214,2.53359865475099,2.52762222507392,6.62266502370548,40.1353719653116,8.16431764856536,4.3371331691534,4.26251669636998,3.92046345335299,4.06951129492081,6.46737889246376,6.1576629751541,11.1237735480468,7.22996784599558,9.73071607144862,5.66183974815932,4.19598885074748,3.87900202508178,20.5030937339934,4.9772735491963,5.44561437714983,8.17462576667492,5.99075622529601,4.79922184794726,4.57452817463033,5.69204429738326,7.77751024791665,10.6806199295935,6.43149984711423,5.8814555185976,5.194701113989,7.13861557498134,7.23059483337246,6.84238338355512,7.32895999457657,7.57590681191306,6.50602214813519,5.9774547152703,7.20248519221397,6.32960234910003,8.300452896462,6.14945857367279,5.90320864726292,6.98499100995342,3.01795190105979,8.88798576788751,9.32540958068929,6.79506770525482,8.61946472599353,8.358051996532,7.40815691068596,6.17006227137329,3.51106593656617,3.3455227924913,3.6941254921427,6.62802472113606,3.98694301967864,4.8616756594474,4.49814997611899,2.95146347621106,4.16521204795921,3.72054311600653,6.17028823219124,3.50296027101508,5.26591519723137,4.26835406605648,4.45878452502207,3.21639972335731,6.14740322814942,3.89198614405078,5.25724871410318,13.1717903845484,8.26046957459495,6.61126416658861,8.74481827194459,6.50262681209228,7.34544529535932,7.66397393568702,6.67134131534611,5.51654315726422,7.59246498471219,6.75265714368445,6.53471542880701,7.75930240960488,7.79856348476481,5.39291645192533,6.48414149624083,9.16049856970089,3.60369011810855,5.71242563048644,10.1436962105772,5.09128319613286,6.59438456369928,6.8031745293609,5.75452487830741,5.60918562322488,4.55296310739987,7.52722699922983,6.22550516883013,3.33690211432188,4.32429789249047,4.04751802292737,3.44862206360455,4.10001171579109,4.07401362850272,6.90470729881945,6.16113861745134,3.56929837144506,10.0637744569148,7.44281895337007,4.99260276983297,6.56705082662491,7.17589654087649,5.30687873499704,11.2699446001629,6.63219941196697,7.33342393989116,5.09235257325564,5.63256595892405,5.3602002381381,8.56957107189649,8.39074685788535,7.40885177299098,8.41565820665345,7.97273843287435,9.17634562408133,7.7708241839653,8.96824163205372,6.03165135757089,5.4390568381871,6.88469982226651,7.45029215022778,3.69266356971921,4.68846746368813,3.11476396215683,3.53459298086122,5.04813151066011,5.46614242015294,9.26320610251035,7.88597033243422,8.91194696329577,8.20921939287614,5.26253912177363,7.01414058987149,8.69633111482352,9.3183181762324,10.3616262202036,5.52003371368491,7.4928001302645,10.0631775013247,15.9294166007955,5.34117399540959,6.04647113929502,5.28094223316515,5.31543407185391,6.14870295887855,10.3371317267288,6.90714086007261,6.77345018930971,8.53299246426703,12.6502330289999,9.28219889233682,27.235168460303,7.0223826672211,2.19909762430683,5.14408884075822,10.8177542521787,6.42127743367454,8.06290200950393,3.04464949114599,3.98941903708308,6.56679419677843,12.1290618930229,11.2122652000206,4.52100394748536,5.30753739367772,5.01363844813173,5.9090723908222,7.28702091574627,4.63563255026274,8.54354403989263,4.54051109519089,5.00025223898222,5.65105371014073,6.42462870288818,8.23601423543482,7.9889862097112,8.6769900440668,8.01559848065658,5.72802370809068,8.85740782027179,7.5228202836934,5.29226170026826,5.8544722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| ||
|short_description=p2@BC016423 | |short_description=p2@BC016423 | ||
}} | }} |
Latest revision as of 13:23, 1 October 2015
Short description: | p2@BC016423 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BC016423_5end |
Coexpression cluster: | MCL_coexpression_mm9:276 |
Association with transcript: | 45bp_to_ENSMUST00000096069, ENSMUST00000110712, NM_134063, uc007pix.1, uc007piy.1_5end |
EntrezGene: | BC016423 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.66e-08 | 13 |
common lymphoid progenitor | 1.66e-08 | 13 |
lymphoid lineage restricted progenitor cell | 2.88e-08 | 12 |
T cell | 1.10e-07 | 11 |
pro-T cell | 1.10e-07 | 11 |
mature alpha-beta T cell | 1.61e-07 | 9 |
alpha-beta T cell | 1.61e-07 | 9 |
immature T cell | 1.61e-07 | 9 |
mature T cell | 1.61e-07 | 9 |
immature alpha-beta T cell | 1.61e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 4.96e-10 | 24 |
thymus | 1.15e-09 | 23 |
neck | 1.15e-09 | 23 |
respiratory system epithelium | 1.15e-09 | 23 |
hemolymphoid system gland | 1.15e-09 | 23 |
pharyngeal epithelium | 1.15e-09 | 23 |
thymic region | 1.15e-09 | 23 |
pharyngeal gland | 1.15e-09 | 23 |
entire pharyngeal arch endoderm | 1.15e-09 | 23 |
thymus primordium | 1.15e-09 | 23 |
early pharyngeal endoderm | 1.15e-09 | 23 |
pharynx | 3.44e-09 | 24 |
upper respiratory tract | 3.44e-09 | 24 |
chordate pharynx | 3.44e-09 | 24 |
pharyngeal arch system | 3.44e-09 | 24 |
pharyngeal region of foregut | 3.44e-09 | 24 |
anterior region of body | 1.57e-08 | 43 |
craniocervical region | 4.02e-08 | 36 |
hemopoietic organ | 8.01e-08 | 29 |
immune organ | 8.01e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 1.08e-07 | 35 |
respiratory system | 1.58e-07 | 42 |
respiratory tract | 3.34e-07 | 41 |
endo-epithelium | 7.77e-07 | 69 |