FFCP PHASE1:Mm9::chr3:93324291..93324313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100502897,20195 | |EntrezGene=100502897,20195 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=481 | |||
|TSSclassifier=NA | |||
|UniProt=P50543 | |UniProt=P50543 | ||
|association_with_transcript=-96bp_to_ENSMUST00000029515_5end | |association_with_transcript=-96bp_to_ENSMUST00000029515_5end | ||
|cluster_id=chr3:93324291..93324313,+ | |||
|description=CAGE_peak_2_at_Gm12854_5end,CAGE_peak_2_at_S100a11_5end | |description=CAGE_peak_2_at_Gm12854_5end,CAGE_peak_2_at_S100a11_5end | ||
|id=chr3:93324291..93324313,+ | |id=chr3:93324291..93324313,+ | ||
|ontology_enrichment_celltype=CL:0000355!1.94e-07!9 | |ontology_enrichment_celltype=CL:0000355!1.94e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.93e-17,9;CL:0000680,4.49e-12,6;CL:0000187,4.49e-12,6;CL:0000056,4.49e-12,6;CL:0000222,3.27e-10,7;CL:0000128,6.10e-08,6;CL:0000126,6.10e-08,6;CL:0000127,6.10e-08,6;CL:0002453,7.75e-08,8;CL:0002494,6.85e-07,3;CL:0000737,6.85e-07,3;CL:0000746,6.85e-07,3;CL:0000513,6.85e-07,3;CL:0000192,8.91e-07,3;CL:0000359,8.91e-07,3;CL:0002539,8.91e-07,3;CL:0000514,8.91e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000383!1.40e-07!10;UBERON:0001134!1.94e-07!9;UBERON:0002036!1.94e-07!9;UBERON:0002385!1.94e-07!9;UBERON:0000486!1.94e-07!9;UBERON:0001015!1.94e-07!9;UBERON:0004290!1.94e-07!9;UBERON:0003082!1.94e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.93e-17,9;UBERON:0002036,3.93e-17,9;UBERON:0002385,3.93e-17,9;UBERON:0000486,3.93e-17,9;UBERON:0007503,3.93e-17,9;UBERON:0001015,3.93e-17,9;UBERON:0002329,3.93e-17,9;UBERON:0003082,3.93e-17,9;UBERON:0003059,3.93e-17,9;UBERON:0007282,3.93e-17,9;UBERON:0004290,3.93e-17,9;UBERON:0009618,3.93e-17,9;UBERON:0000383,3.29e-15,10;UBERON:0007524,1.23e-13,11;UBERON:0003077,1.23e-13,11;UBERON:0007285,1.23e-13,11;UBERON:0002204,2.18e-11,32;UBERON:0000947,3.79e-08,4;UBERON:0001637,3.79e-08,4;UBERON:0004573,3.79e-08,4;UBERON:0003509,3.79e-08,4;UBERON:0004571,3.79e-08,4;UBERON:0010191,3.79e-08,4;UBERON:0004572,3.79e-08,4;UBERON:0001135,8.91e-07,3;UBERON:0004237,8.91e-07,3;UBERON:0004695,8.91e-07,3;UBERON:0002111,8.91e-07,3;UBERON:0004178,8.91e-07,3 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,5.02237956884289,6.2506827561904,2.61761871986899,11.1763982725893,7.5135003345429,6.79714494243615,4.53228544712078,5.17022349219524,5.68994931701213,7.82391344348039,1.96222640742402,4.17403747195497,3.88859798148567,3.63964696225943,0,0,0,0.336093799142464,3.8588915405392,5.73066879877513,8.76642556871652,0.202316460859598,0,0,5.76035704517525,7.11435836888911,2.2497492932035,2.96659908770092,2.1314403448383,0.898800331555214,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.530083353332288,0.68014404096107,0.579728977403356,0,0,0,0,0,0.280888840263504,1.1930122580464,0.259786004602869,2.12003744706204,0.281686839553361,1.28326477414318,0,0,4.97929394325792,4.81383744402687,4.04419556011827,0.11418387971906,0.776813650941515,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,1.73036477414062,2.02439099687876,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.359445373517761,1.19980546198682,0.508280908292259,0,0,0.125654352112864,0,0,0,0.162241263067758,1.2220723662038,0.373220911830279,0.758168275301024,0.420883711772948,0.520481771850815,0,0,0,0.476255494059295,0.2562274405697,0.187403449119458,0.258703370739016,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0.199034266818493,1.40442637462647,2.05878325691772,0.284163499395593,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0.32833492815819,0.162137619091711,0,0.219550115291051,0,0,0.308713837137853,0,0,0,0,0.515469845288373,0,0,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.379335801906163,0.456994050438915,1.1270773567308,0.814605311381257,0,0.841629838683823,1.26473074248515,1.03327103585722,1.56998727841375,0.493588655687202,0,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.923765950833023,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0.476087281772027,0.780534591431195,0.788175720530955,0.8858587585951,0.318909537314974,0.81931657357869,0.172684981865896,0.578596234326046,3.01582567878545,0.54390568381871,0.491764273019036,0.275936746304732,0,0.234423373184406,5.40985319743029,0.504941854408746,0,0,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,0,0.425820255624806,1.24645922567079,1.79175655288934,0.494910368917606,0,0.242780636154981,0,0,0.885905678642318,0,0.775284879504663,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,4.4587624532105,11.4389318266463,0,1.48397627647332,0.322928853391811,0.361877549568935,0.596861720015682,0.164140899745061,0,0,0.683483523191411,0.206386867963223,1.29636169158798,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,0.276399947608848,0.954670618015114,0,0,0.216010681643603,1.25452977608681,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0.102710957164827,0.389762468933385,0.537080087002444,0.596044064343795,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.233753804363138,0,3.32978930061097,0.717710852875806,2.3503846290971,0.579568782096571,1.87682475451182,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0.287177344778066,0.952587382566147,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0,0.470546902076653,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,5.02237956884289,6.2506827561904,2.61761871986899,11.1763982725893,7.5135003345429,6.79714494243615,4.53228544712078,5.17022349219524,5.68994931701213,7.82391344348039,1.96222640742402,4.17403747195497,3.88859798148567,3.63964696225943,0,0,0,0.336093799142464,3.8588915405392,5.73066879877513,8.76642556871652,0.202316460859598,0,0,5.76035704517525,7.11435836888911,2.2497492932035,2.96659908770092,2.1314403448383,0.898800331555214,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.530083353332288,0.68014404096107,0.579728977403356,0,0,0,0,0,0.280888840263504,1.1930122580464,0.259786004602869,2.12003744706204,0.281686839553361,1.28326477414318,0,0,4.97929394325792,4.81383744402687,4.04419556011827,0.11418387971906,0.776813650941515,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,1.73036477414062,2.02439099687876,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.359445373517761,1.19980546198682,0.508280908292259,0,0,0.125654352112864,0,0,0,0.162241263067758,1.2220723662038,0.373220911830279,0.758168275301024,0.420883711772948,0.520481771850815,0,0,0,0.476255494059295,0.2562274405697,0.187403449119458,0.258703370739016,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0.199034266818493,1.40442637462647,2.05878325691772,0.284163499395593,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0.32833492815819,0.162137619091711,0,0.219550115291051,0,0,0.308713837137853,0,0,0,0,0.515469845288373,0,0,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.379335801906163,0.456994050438915,1.1270773567308,0.814605311381257,0,0.841629838683823,1.26473074248515,1.03327103585722,1.56998727841375,0.493588655687202,0,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.923765950833023,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0.476087281772027,0.780534591431195,0.788175720530955,0.8858587585951,0.318909537314974,0.81931657357869,0.172684981865896,0.578596234326046,3.01582567878545,0.54390568381871,0.491764273019036,0.275936746304732,0,0.234423373184406,5.40985319743029,0.504941854408746,0,0,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,0,0.425820255624806,1.24645922567079,1.79175655288934,0.494910368917606,0,0.242780636154981,0,0,0.885905678642318,0,0.775284879504663,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,4.4587624532105,11.4389318266463,0,1.48397627647332,0.322928853391811,0.361877549568935,0.596861720015682,0.164140899745061,0,0,0.683483523191411,0.206386867963223,1.29636169158798,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,0.276399947608848,0.954670618015114,0,0,0.216010681643603,1.25452977608681,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0.102710957164827,0.389762468933385,0.537080087002444,0.596044064343795,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.233753804363138,0,3.32978930061097,0.717710852875806,2.3503846290971,0.579568782096571,1.87682475451182,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0.287177344778066,0.952587382566147,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0,0.470546902076653,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p2@Gm12854,p2@S100a11 | |short_description=p2@Gm12854,p2@S100a11 | ||
}} | }} |
Latest revision as of 22:33, 25 September 2015
Short description: | p2@Gm12854, p2@S100a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm12854_5end, CAGE_peak_2_at_S100a11_5end |
Coexpression cluster: | MCL_coexpression_mm9:481 |
Association with transcript: | -96bp_to_ENSMUST00000029515_5end |
EntrezGene: | 100502897,20195 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.93e-17 | 9 |
muscle precursor cell | 4.49e-12 | 6 |
muscle cell | 4.49e-12 | 6 |
myoblast | 4.49e-12 | 6 |
mesodermal cell | 3.27e-10 | 7 |
oligodendrocyte | 6.10e-08 | 6 |
macroglial cell | 6.10e-08 | 6 |
astrocyte | 6.10e-08 | 6 |
oligodendrocyte precursor cell | 7.75e-08 | 8 |
cardiocyte | 6.85e-07 | 3 |
striated muscle cell | 6.85e-07 | 3 |
cardiac muscle cell | 6.85e-07 | 3 |
cardiac muscle myoblast | 6.85e-07 | 3 |
smooth muscle cell | 8.91e-07 | 3 |
vascular associated smooth muscle cell | 8.91e-07 | 3 |
aortic smooth muscle cell | 8.91e-07 | 3 |
smooth muscle myoblast | 8.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.93e-17 | 9 |
striated muscle tissue | 3.93e-17 | 9 |
muscle tissue | 3.93e-17 | 9 |
multilaminar epithelium | 3.93e-17 | 9 |
epithelial vesicle | 3.93e-17 | 9 |
musculature | 3.93e-17 | 9 |
somite | 3.93e-17 | 9 |
myotome | 3.93e-17 | 9 |
presomitic mesoderm | 3.93e-17 | 9 |
presumptive segmental plate | 3.93e-17 | 9 |
dermomyotome | 3.93e-17 | 9 |
trunk paraxial mesoderm | 3.93e-17 | 9 |
musculature of body | 3.29e-15 | 10 |
dense mesenchyme tissue | 1.23e-13 | 11 |
paraxial mesoderm | 1.23e-13 | 11 |
presumptive paraxial mesoderm | 1.23e-13 | 11 |
musculoskeletal system | 2.18e-11 | 32 |
aorta | 3.79e-08 | 4 |
artery | 3.79e-08 | 4 |
systemic artery | 3.79e-08 | 4 |
arterial blood vessel | 3.79e-08 | 4 |
systemic arterial system | 3.79e-08 | 4 |
aortic system | 3.79e-08 | 4 |
arterial system | 3.79e-08 | 4 |
smooth muscle tissue | 8.91e-07 | 3 |
blood vessel smooth muscle | 8.91e-07 | 3 |
arterial system smooth muscle | 8.91e-07 | 3 |
artery smooth muscle tissue | 8.91e-07 | 3 |
aorta smooth muscle tissue | 8.91e-07 | 3 |