FFCP PHASE1:Mm9::chr4:102662199..102662237,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:102662199..102662237,+ | |||
|description=CAGE_peak_at_chr4:102662199..102662237,+ | |description=CAGE_peak_at_chr4:102662199..102662237,+ | ||
|id=chr4:102662199..102662237,+ | |id=chr4:102662199..102662237,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.17e-13!11;CL:0000827!1.17e-13!11;CL:0000838!1.75e-12!12;CL:0000791!5.32e-12!9;CL:0000789!5.32e-12!9;CL:0002420!5.32e-12!9;CL:0002419!5.32e-12!9;CL:0000790!5.32e-12!9;CL:0000542!1.74e-11!13;CL:0000051!1.74e-11!13;CL:0000624!7.27e-09!8;CL:0000738!1.15e-08!17;CL:0002087!1.15e-08!17 | |ontology_enrichment_celltype=CL:0000084!1.17e-13!11;CL:0000827!1.17e-13!11;CL:0000838!1.75e-12!12;CL:0000791!5.32e-12!9;CL:0000789!5.32e-12!9;CL:0002420!5.32e-12!9;CL:0002419!5.32e-12!9;CL:0000790!5.32e-12!9;CL:0000542!1.74e-11!13;CL:0000051!1.74e-11!13;CL:0000624!7.27e-09!8;CL:0000738!1.15e-08!17;CL:0002087!1.15e-08!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,6.23e-09,1;CL:0000792,6.23e-09,1;CL:0000625,1.05e-08,1;CL:0000791,4.85e-08,9;CL:0000789,4.85e-08,9;CL:0002420,4.85e-08,9;CL:0002419,4.85e-08,9;CL:0000790,4.85e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.76e-34!23;UBERON:0000974!1.76e-34!23;UBERON:0004807!1.76e-34!23;UBERON:0005058!1.76e-34!23;UBERON:0003351!1.76e-34!23;UBERON:0009113!1.76e-34!23;UBERON:0003295!1.76e-34!23;UBERON:0009722!1.76e-34!23;UBERON:0005562!1.76e-34!23;UBERON:0007690!1.76e-34!23;UBERON:0006562!5.96e-33!24;UBERON:0003408!5.96e-33!24;UBERON:0001557!5.96e-33!24;UBERON:0001042!5.96e-33!24;UBERON:0008814!5.96e-33!24;UBERON:0009145!5.96e-33!24;UBERON:0000072!4.87e-29!27;UBERON:0004177!7.04e-27!29;UBERON:0000063!7.09e-22!35;UBERON:0000065!2.47e-18!41;UBERON:0001004!7.69e-18!42;UBERON:0002390!1.71e-16!45;UBERON:0003061!1.71e-16!45;UBERON:0002193!2.58e-15!48;UBERON:0005057!2.83e-14!51;UBERON:0003929!4.62e-13!55;UBERON:0002368!8.97e-12!60;UBERON:0002530!1.11e-10!65;UBERON:0000490!1.75e-10!66;UBERON:0005911!6.36e-10!69;UBERON:0002405!9.55e-10!70;UBERON:0000949!2.08e-09!72;UBERON:0003081!1.83e-08!88;UBERON:0007811!1.76e-07!86;UBERON:0001041!7.82e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.98e-25,23;UBERON:0000974,4.98e-25,23;UBERON:0004807,4.98e-25,23;UBERON:0005058,4.98e-25,23;UBERON:0003351,4.98e-25,23;UBERON:0009113,4.98e-25,23;UBERON:0003295,4.98e-25,23;UBERON:0009722,4.98e-25,23;UBERON:0005562,4.98e-25,23;UBERON:0007690,4.98e-25,23;UBERON:0006562,5.81e-24,24;UBERON:0003408,5.81e-24,24;UBERON:0001557,5.81e-24,24;UBERON:0001042,5.81e-24,24;UBERON:0008814,5.81e-24,24;UBERON:0009145,5.81e-24,24;UBERON:0000072,3.12e-21,27;UBERON:0004177,1.01e-19,29;UBERON:0005057,1.01e-19,29;UBERON:0000077,3.14e-16,35;UBERON:0007811,9.27e-16,36;UBERON:0000065,9.44e-14,41;UBERON:0001004,2.09e-13,42;UBERON:0000153,4.45e-13,43;UBERON:0002390,1.83e-12,45;UBERON:0003061,1.83e-12,45;UBERON:0002193,1.23e-11,48;UBERON:0002405,1.23e-11,48;UBERON:0003929,4.67e-10,55;UBERON:0002368,3.76e-09,60;UBERON:0002530,2.20e-08,65;UBERON:0000490,3.04e-08,66;UBERON:0005911,7.54e-08,69;UBERON:0000949,1.74e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0,0,0,0,0.342401459862411,0.611942816932982,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0,0.537080087002444,1.19208812868759,0.600977247599844,2.21534290761866,3.43285929823702,1.447929326445,1.41156659191577,1.36441033035653,4.81059208201647,6.31135271780472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0,0,0,0,0.342401459862411,0.611942816932982,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0,0.537080087002444,1.19208812868759,0.600977247599844,2.21534290761866,3.43285929823702,1.447929326445,1.41156659191577,1.36441033035653,4.81059208201647,6.31135271780472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:102662199..102662237,+ | |short_description=p@chr4:102662199..102662237,+ | ||
}} | }} |
Latest revision as of 11:13, 4 August 2015
Short description: | p@chr4:102662199..102662237, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:102662199..102662237, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 6.23e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.23e-09 | 1 |
CD8-positive, alpha-beta T cell | 1.05e-08 | 1 |
mature alpha-beta T cell | 4.85e-08 | 9 |
alpha-beta T cell | 4.85e-08 | 9 |
immature T cell | 4.85e-08 | 9 |
mature T cell | 4.85e-08 | 9 |
immature alpha-beta T cell | 4.85e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.98e-25 | 23 |
neck | 4.98e-25 | 23 |
respiratory system epithelium | 4.98e-25 | 23 |
hemolymphoid system gland | 4.98e-25 | 23 |
pharyngeal epithelium | 4.98e-25 | 23 |
thymic region | 4.98e-25 | 23 |
pharyngeal gland | 4.98e-25 | 23 |
entire pharyngeal arch endoderm | 4.98e-25 | 23 |
thymus primordium | 4.98e-25 | 23 |
early pharyngeal endoderm | 4.98e-25 | 23 |
pharynx | 5.81e-24 | 24 |
gland of gut | 5.81e-24 | 24 |
upper respiratory tract | 5.81e-24 | 24 |
chordate pharynx | 5.81e-24 | 24 |
pharyngeal arch system | 5.81e-24 | 24 |
pharyngeal region of foregut | 5.81e-24 | 24 |
segment of respiratory tract | 3.12e-21 | 27 |
hemopoietic organ | 1.01e-19 | 29 |
immune organ | 1.01e-19 | 29 |
mixed endoderm/mesoderm-derived structure | 3.14e-16 | 35 |
craniocervical region | 9.27e-16 | 36 |
respiratory tract | 9.44e-14 | 41 |
respiratory system | 2.09e-13 | 42 |
anterior region of body | 4.45e-13 | 43 |
hematopoietic system | 1.83e-12 | 45 |
blood island | 1.83e-12 | 45 |
hemolymphoid system | 1.23e-11 | 48 |
immune system | 1.23e-11 | 48 |
gut epithelium | 4.67e-10 | 55 |
endocrine gland | 3.76e-09 | 60 |
gland | 2.20e-08 | 65 |
unilaminar epithelium | 3.04e-08 | 66 |
endo-epithelium | 7.54e-08 | 69 |
endocrine system | 1.74e-07 | 72 |