FFCP PHASE1:Mm9::chr14:18814147..18814153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21834 | |EntrezGene=21834 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=P37242 | |UniProt=P37242 | ||
|association_with_transcript=-4bp_to_ENSMUST00000022304,NM_009380,uc007sho.2_5end | |association_with_transcript=-4bp_to_ENSMUST00000022304,NM_009380,uc007sho.2_5end | ||
|cluster_id=chr14:18814147..18814153,+ | |||
|description=CAGE_peak_5_at_Thrb_5end | |description=CAGE_peak_5_at_Thrb_5end | ||
|id=chr14:18814147..18814153,+ | |id=chr14:18814147..18814153,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!6.98e-38!9;UBERON:0000019!6.98e-38!9;UBERON:0000047!6.98e-38!9;UBERON:0004088!6.98e-38!9;UBERON:0002104!6.98e-38!9;UBERON:0001456!6.98e-38!9;UBERON:0003072!6.98e-38!9;UBERON:0003071!6.98e-38!9;UBERON:0004128!6.98e-38!9;UBERON:0001444!7.46e-31!11;UBERON:0000020!3.24e-28!12;UBERON:0001032!3.24e-28!12;UBERON:0004456!3.24e-28!12;UBERON:0005085!5.55e-26!13;UBERON:0003056!1.03e-09!49;UBERON:0000033!3.07e-07!63 | |ontology_enrichment_uberon=UBERON:0000970!6.98e-38!9;UBERON:0000019!6.98e-38!9;UBERON:0000047!6.98e-38!9;UBERON:0004088!6.98e-38!9;UBERON:0002104!6.98e-38!9;UBERON:0001456!6.98e-38!9;UBERON:0003072!6.98e-38!9;UBERON:0003071!6.98e-38!9;UBERON:0004128!6.98e-38!9;UBERON:0001444!7.46e-31!11;UBERON:0000020!3.24e-28!12;UBERON:0001032!3.24e-28!12;UBERON:0004456!3.24e-28!12;UBERON:0005085!5.55e-26!13;UBERON:0003056!1.03e-09!49;UBERON:0000033!3.07e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.11e-50,9;UBERON:0000019,5.11e-50,9;UBERON:0000047,5.11e-50,9;UBERON:0010312,5.11e-50,9;UBERON:0004088,5.11e-50,9;UBERON:0002104,5.11e-50,9;UBERON:0001456,5.11e-50,9;UBERON:0003072,5.11e-50,9;UBERON:0004128,5.11e-50,9;UBERON:0003071,5.11e-50,9;UBERON:0001444,5.06e-41,11;UBERON:0000020,1.20e-37,12;UBERON:0001032,1.20e-37,12;UBERON:0004456,1.20e-37,12;UBERON:0000033,8.68e-35,13;UBERON:0005085,8.68e-35,13;UBERON:0007811,8.84e-13,36;UBERON:0003056,1.11e-12,49;UBERON:0000153,9.82e-11,43;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0.919608417733892,1.98068342785884,3.76762044589288,4.21826294738233,3.07472928683639,2.24884138943349,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0.919608417733892,1.98068342785884,3.76762044589288,4.21826294738233,3.07472928683639,2.24884138943349,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p5@Thrb | |short_description=p5@Thrb | ||
}} | }} |
Latest revision as of 18:09, 25 September 2015
Short description: | p5@Thrb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Thrb_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | -4bp_to_ENSMUST00000022304, NM_009380, uc007sho.2_5end |
EntrezGene: | Thrb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 5.11e-50 | 9 |
camera-type eye | 5.11e-50 | 9 |
simple eye | 5.11e-50 | 9 |
immature eye | 5.11e-50 | 9 |
ocular region | 5.11e-50 | 9 |
visual system | 5.11e-50 | 9 |
face | 5.11e-50 | 9 |
optic cup | 5.11e-50 | 9 |
optic vesicle | 5.11e-50 | 9 |
eye primordium | 5.11e-50 | 9 |
subdivision of head | 5.06e-41 | 11 |
sense organ | 1.20e-37 | 12 |
sensory system | 1.20e-37 | 12 |
entire sense organ system | 1.20e-37 | 12 |
head | 8.68e-35 | 13 |
ectodermal placode | 8.68e-35 | 13 |
craniocervical region | 8.84e-13 | 36 |
pre-chordal neural plate | 1.11e-12 | 49 |
anterior region of body | 9.82e-11 | 43 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |