FFCP PHASE1:Mm9::chr14:71174145..71174160,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13449 | |EntrezGene=13449 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2939 | |||
|TSSclassifier=NA | |||
|UniProt=O70469,Q3TX09 | |UniProt=O70469,Q3TX09 | ||
|association_with_transcript=-27bp_to_NM_010071,uc007uoy.1_5end | |association_with_transcript=-27bp_to_NM_010071,uc007uoy.1_5end | ||
|cluster_id=chr14:71174145..71174160,+ | |||
|description=CAGE_peak_3_at_Dok2_5end | |description=CAGE_peak_3_at_Dok2_5end | ||
|id=chr14:71174145..71174160,+ | |id=chr14:71174145..71174160,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.44e-10!11;CL:0000827!2.44e-10!11;CL:0000738!2.43e-09!17;CL:0002087!2.43e-09!17;CL:0000838!3.86e-09!12;CL:0000791!1.24e-08!9;CL:0000789!1.24e-08!9;CL:0002420!1.24e-08!9;CL:0002419!1.24e-08!9;CL:0000790!1.24e-08!9;CL:0000542!3.91e-08!13;CL:0000051!3.91e-08!13;CL:0000624!9.65e-08!8;CL:0002031!1.24e-07!25;CL:0000988!2.01e-07!32;CL:0002032!2.01e-07!32;CL:0000037!2.01e-07!32;CL:0000566!2.01e-07!32;CL:0000837!2.01e-07!32 | |ontology_enrichment_celltype=CL:0000084!2.44e-10!11;CL:0000827!2.44e-10!11;CL:0000738!2.43e-09!17;CL:0002087!2.43e-09!17;CL:0000838!3.86e-09!12;CL:0000791!1.24e-08!9;CL:0000789!1.24e-08!9;CL:0002420!1.24e-08!9;CL:0002419!1.24e-08!9;CL:0000790!1.24e-08!9;CL:0000542!3.91e-08!13;CL:0000051!3.91e-08!13;CL:0000624!9.65e-08!8;CL:0002031!1.24e-07!25;CL:0000988!2.01e-07!32;CL:0002032!2.01e-07!32;CL:0000037!2.01e-07!32;CL:0000566!2.01e-07!32;CL:0000837!2.01e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.07e-17,11;CL:0000827,6.07e-17,11;CL:0000838,1.83e-15,12;CL:0000542,3.26e-14,13;CL:0000051,3.26e-14,13;CL:0000738,9.56e-14,17;CL:0002087,9.56e-14,17;CL:0000791,2.76e-11,9;CL:0000789,2.76e-11,9;CL:0002420,2.76e-11,9;CL:0002419,2.76e-11,9;CL:0000790,2.76e-11,9;CL:0002031,5.41e-09,25;CL:0000624,1.46e-08,8;CL:0002320,4.70e-07,46;CL:0000134,4.70e-07,46;CL:0000988,8.78e-07,32;CL:0002032,8.78e-07,32;CL:0000037,8.78e-07,32;CL:0000837,8.78e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.40e-15!48;UBERON:0002390!4.05e-15!45;UBERON:0003061!4.05e-15!45;UBERON:0004177!1.28e-13!29;UBERON:0002370!2.35e-13!23;UBERON:0000974!2.35e-13!23;UBERON:0004807!2.35e-13!23;UBERON:0005058!2.35e-13!23;UBERON:0003351!2.35e-13!23;UBERON:0009113!2.35e-13!23;UBERON:0003295!2.35e-13!23;UBERON:0009722!2.35e-13!23;UBERON:0005562!2.35e-13!23;UBERON:0007690!2.35e-13!23;UBERON:0006562!1.78e-12!24;UBERON:0003408!1.78e-12!24;UBERON:0001557!1.78e-12!24;UBERON:0001042!1.78e-12!24;UBERON:0008814!1.78e-12!24;UBERON:0009145!1.78e-12!24;UBERON:0002405!2.89e-12!70;UBERON:0000072!2.96e-10!27;UBERON:0005057!2.73e-09!51;UBERON:0000065!5.28e-09!41;UBERON:0001004!1.39e-08!42;UBERON:0003081!2.82e-08!88 | |ontology_enrichment_uberon=UBERON:0002193!1.40e-15!48;UBERON:0002390!4.05e-15!45;UBERON:0003061!4.05e-15!45;UBERON:0004177!1.28e-13!29;UBERON:0002370!2.35e-13!23;UBERON:0000974!2.35e-13!23;UBERON:0004807!2.35e-13!23;UBERON:0005058!2.35e-13!23;UBERON:0003351!2.35e-13!23;UBERON:0009113!2.35e-13!23;UBERON:0003295!2.35e-13!23;UBERON:0009722!2.35e-13!23;UBERON:0005562!2.35e-13!23;UBERON:0007690!2.35e-13!23;UBERON:0006562!1.78e-12!24;UBERON:0003408!1.78e-12!24;UBERON:0001557!1.78e-12!24;UBERON:0001042!1.78e-12!24;UBERON:0008814!1.78e-12!24;UBERON:0009145!1.78e-12!24;UBERON:0002405!2.89e-12!70;UBERON:0000072!2.96e-10!27;UBERON:0005057!2.73e-09!51;UBERON:0000065!5.28e-09!41;UBERON:0001004!1.39e-08!42;UBERON:0003081!2.82e-08!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.05e-12,23;UBERON:0000974,2.05e-12,23;UBERON:0004807,2.05e-12,23;UBERON:0005058,2.05e-12,23;UBERON:0003351,2.05e-12,23;UBERON:0009113,2.05e-12,23;UBERON:0003295,2.05e-12,23;UBERON:0009722,2.05e-12,23;UBERON:0005562,2.05e-12,23;UBERON:0007690,2.05e-12,23;UBERON:0006562,7.69e-12,24;UBERON:0003408,7.69e-12,24;UBERON:0001557,7.69e-12,24;UBERON:0001042,7.69e-12,24;UBERON:0008814,7.69e-12,24;UBERON:0009145,7.69e-12,24;UBERON:0002390,1.61e-10,45;UBERON:0003061,1.61e-10,45;UBERON:0000072,2.26e-10,27;UBERON:0002193,9.94e-10,48;UBERON:0002405,9.94e-10,48;UBERON:0004177,1.46e-09,29;UBERON:0005057,1.46e-09,29;UBERON:0000077,1.09e-07,35;UBERON:0007811,1.95e-07,36;UBERON:0002384,4.70e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,5.16493293766305,0.985521055061667,0.70219357896598,0.34243593645101,0.319088635981346,2.39681021903688,5.59490575481583,0.333109761815663,0,0,0.473193248037357,0.548457734422955,0,0.17008658030214,1.09220046320974,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0.837063261473815,0,2.09409497589519,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0.286533439938757,0.515672092277442,0,0,0,0,0,2.6996991518442,0,2.8419204597844,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0.718890747035522,0,0.635351135365324,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0.350296027101508,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0,0,0,0.667380422864376,0.786235980452812,0.449724224769707,1.01430060694251,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0,0.512612642393558,0,0.370389054739423,0,0.136694227721025,0.457556346413045,1.18984900995699,1.53946597556024,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.616265742988964,0.389762468933385,0.895133478337407,0.993406773906324,1.9231271923195,1.18151621739662,1.41353029927407,1.06689529317,1.00826185136841,0.779663045918019,1.44317762460494,1.5193997283604,0,0,0.358855426437903,0.167884616364078,0.386379188064381,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0,0,0,0.644613162144895,0,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,5.16493293766305,0.985521055061667,0.70219357896598,0.34243593645101,0.319088635981346,2.39681021903688,5.59490575481583,0.333109761815663,0,0,0.473193248037357,0.548457734422955,0,0.17008658030214,1.09220046320974,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0.837063261473815,0,2.09409497589519,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0.286533439938757,0.515672092277442,0,0,0,0,0,2.6996991518442,0,2.8419204597844,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0.718890747035522,0,0.635351135365324,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0.350296027101508,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0,0,0,0.667380422864376,0.786235980452812,0.449724224769707,1.01430060694251,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0,0.512612642393558,0,0.370389054739423,0,0.136694227721025,0.457556346413045,1.18984900995699,1.53946597556024,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.616265742988964,0.389762468933385,0.895133478337407,0.993406773906324,1.9231271923195,1.18151621739662,1.41353029927407,1.06689529317,1.00826185136841,0.779663045918019,1.44317762460494,1.5193997283604,0,0,0.358855426437903,0.167884616364078,0.386379188064381,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0,0,0,0.644613162144895,0,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Dok2 | |short_description=p3@Dok2 | ||
}} | }} |
Latest revision as of 08:53, 26 September 2015
Short description: | p3@Dok2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dok2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2939 |
Association with transcript: | -27bp_to_NM_010071, uc007uoy.1_5end |
EntrezGene: | Dok2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.07e-17 | 11 |
pro-T cell | 6.07e-17 | 11 |
lymphoid lineage restricted progenitor cell | 1.83e-15 | 12 |
lymphocyte | 3.26e-14 | 13 |
common lymphoid progenitor | 3.26e-14 | 13 |
leukocyte | 9.56e-14 | 17 |
nongranular leukocyte | 9.56e-14 | 17 |
mature alpha-beta T cell | 2.76e-11 | 9 |
alpha-beta T cell | 2.76e-11 | 9 |
immature T cell | 2.76e-11 | 9 |
mature T cell | 2.76e-11 | 9 |
immature alpha-beta T cell | 2.76e-11 | 9 |
hematopoietic lineage restricted progenitor cell | 5.41e-09 | 25 |
CD4-positive, alpha-beta T cell | 1.46e-08 | 8 |
connective tissue cell | 4.70e-07 | 46 |
mesenchymal cell | 4.70e-07 | 46 |
hematopoietic cell | 8.78e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.78e-07 | 32 |
hematopoietic stem cell | 8.78e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.78e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.05e-12 | 23 |
neck | 2.05e-12 | 23 |
respiratory system epithelium | 2.05e-12 | 23 |
hemolymphoid system gland | 2.05e-12 | 23 |
pharyngeal epithelium | 2.05e-12 | 23 |
thymic region | 2.05e-12 | 23 |
pharyngeal gland | 2.05e-12 | 23 |
entire pharyngeal arch endoderm | 2.05e-12 | 23 |
thymus primordium | 2.05e-12 | 23 |
early pharyngeal endoderm | 2.05e-12 | 23 |
pharynx | 7.69e-12 | 24 |
gland of gut | 7.69e-12 | 24 |
upper respiratory tract | 7.69e-12 | 24 |
chordate pharynx | 7.69e-12 | 24 |
pharyngeal arch system | 7.69e-12 | 24 |
pharyngeal region of foregut | 7.69e-12 | 24 |
hematopoietic system | 1.61e-10 | 45 |
blood island | 1.61e-10 | 45 |
segment of respiratory tract | 2.26e-10 | 27 |
hemolymphoid system | 9.94e-10 | 48 |
immune system | 9.94e-10 | 48 |
hemopoietic organ | 1.46e-09 | 29 |
immune organ | 1.46e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 1.09e-07 | 35 |
craniocervical region | 1.95e-07 | 36 |
connective tissue | 4.70e-07 | 46 |