FFCP PHASE1:Mm9::chr15:99421285..99421330,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:99421285..99421330,- | |||
|description=CAGE_peak_at_chr15:99421285..99421330,- | |description=CAGE_peak_at_chr15:99421285..99421330,- | ||
|id=chr15:99421285..99421330,- | |id=chr15:99421285..99421330,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.98e-13,3;CL:0002202,1.98e-13,3;CL:0000069,1.98e-13,3;CL:0002632,1.98e-13,3;CL:0002368,1.98e-13,3;CL:0000307,1.98e-13,3;CL:0000377,1.98e-13,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!5.30e-11!17;UBERON:0005181!5.30e-11!17;UBERON:0002224!5.30e-11!17;UBERON:0000915!5.30e-11!17;UBERON:0008947!5.30e-11!17;UBERON:0003258!5.30e-11!17;UBERON:0005157!7.56e-09!27;UBERON:0001004!1.39e-08!42;UBERON:0005153!1.99e-08!17;UBERON:0000065!8.28e-08!41;UBERON:0002048!8.44e-08!14;UBERON:0000117!8.44e-08!14;UBERON:0000171!8.44e-08!14;UBERON:0000170!8.44e-08!14;UBERON:0005597!8.44e-08!14;UBERON:0000118!8.44e-08!14 | |ontology_enrichment_uberon=UBERON:0005178!5.30e-11!17;UBERON:0005181!5.30e-11!17;UBERON:0002224!5.30e-11!17;UBERON:0000915!5.30e-11!17;UBERON:0008947!5.30e-11!17;UBERON:0003258!5.30e-11!17;UBERON:0005157!7.56e-09!27;UBERON:0001004!1.39e-08!42;UBERON:0005153!1.99e-08!17;UBERON:0000065!8.28e-08!41;UBERON:0002048!8.44e-08!14;UBERON:0000117!8.44e-08!14;UBERON:0000171!8.44e-08!14;UBERON:0000170!8.44e-08!14;UBERON:0005597!8.44e-08!14;UBERON:0000118!8.44e-08!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,7.26e-37,17;UBERON:0005181,7.26e-37,17;UBERON:0002224,7.26e-37,17;UBERON:0000915,7.26e-37,17;UBERON:0008947,7.26e-37,17;UBERON:0003258,7.26e-37,17;UBERON:0002048,7.33e-26,14;UBERON:0000117,7.33e-26,14;UBERON:0000171,7.33e-26,14;UBERON:0000170,7.33e-26,14;UBERON:0005597,7.33e-26,14;UBERON:0000118,7.33e-26,14;UBERON:0001004,6.21e-24,42;UBERON:0000065,2.05e-21,41;UBERON:0005153,5.04e-21,17;UBERON:0005157,1.24e-17,20;UBERON:0003126,1.98e-13,3;UBERON:0001005,1.98e-13,3;UBERON:0007196,1.98e-13,3;UBERON:0001558,1.98e-13,3;UBERON:0001041,9.41e-13,80;UBERON:0000165,4.58e-09,2;UBERON:0000166,4.58e-09,2;UBERON:0000930,4.58e-09,2;UBERON:0004921,5.59e-08,114;UBERON:0001007,8.74e-08,116;UBERON:0001555,8.74e-08,116;UBERON:0007026,8.74e-08,116;UBERON:0009569,8.82e-08,66;UBERON:0004119,1.35e-07,118;UBERON:0000925,1.35e-07,118;UBERON:0006595,1.35e-07,118;UBERON:0001048,3.19e-07,134 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,9.09262372247099,4.30711771307668,8.08839112023653,0.22836775943812,0,0,0,0.608930956624282,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,1.81092359517311,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,3.14080423283228,0,0,0,0,1.00503754465089,1.42826184531608,2.14647012643579,1.57635144106191,2.43611158613652,1.2756381492599,3.60499292374624,2.24490476425664,2.60368305446721,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,13.6694648879124,0,2.54178128274764,0.496375471371293,1.36115831840833,0.645799117388655,0.506868376472335,0,0,0.419437377702843,0,0,0,0.810900861160657,1.02710957164827,0.51968329191118,1.25318686967237,0.198681354781265,0.360586348559907,0,0,0,0.100826185136841,0,0,0,1.58711268530648,0,0,0,0,3.56596703357246,2.74727436400898,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0.760437899670719,0.377252682772152,0.0936415074698824,0.320125762024346,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.470546902076653,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,9.09262372247099,4.30711771307668,8.08839112023653,0.22836775943812,0,0,0,0.608930956624282,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,1.81092359517311,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,3.14080423283228,0,0,0,0,1.00503754465089,1.42826184531608,2.14647012643579,1.57635144106191,2.43611158613652,1.2756381492599,3.60499292374624,2.24490476425664,2.60368305446721,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,13.6694648879124,0,2.54178128274764,0.496375471371293,1.36115831840833,0.645799117388655,0.506868376472335,0,0,0.419437377702843,0,0,0,0.810900861160657,1.02710957164827,0.51968329191118,1.25318686967237,0.198681354781265,0.360586348559907,0,0,0,0.100826185136841,0,0,0,1.58711268530648,0,0,0,0,3.56596703357246,2.74727436400898,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0.760437899670719,0.377252682772152,0.0936415074698824,0.320125762024346,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.470546902076653,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | ||
|short_description=p@chr15:99421285..99421330,- | |short_description=p@chr15:99421285..99421330,- | ||
}} | }} |
Latest revision as of 00:07, 6 August 2015
Short description: | p@chr15:99421285..99421330, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:99421285..99421330, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.98e-13 | 3 |
epithelial cell of tracheobronchial tree | 1.98e-13 | 3 |
branched duct epithelial cell | 1.98e-13 | 3 |
epithelial cell of lower respiratory tract | 1.98e-13 | 3 |
respiratory epithelial cell | 1.98e-13 | 3 |
tracheal epithelial cell | 1.98e-13 | 3 |
tracheoblast | 1.98e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 7.26e-37 | 17 |
thoracic segment organ | 7.26e-37 | 17 |
thoracic cavity | 7.26e-37 | 17 |
thoracic segment of trunk | 7.26e-37 | 17 |
respiratory primordium | 7.26e-37 | 17 |
endoderm of foregut | 7.26e-37 | 17 |
lung | 7.33e-26 | 14 |
respiratory tube | 7.33e-26 | 14 |
respiration organ | 7.33e-26 | 14 |
pair of lungs | 7.33e-26 | 14 |
lung primordium | 7.33e-26 | 14 |
lung bud | 7.33e-26 | 14 |
respiratory system | 6.21e-24 | 42 |
respiratory tract | 2.05e-21 | 41 |
epithelial bud | 5.04e-21 | 17 |
epithelial fold | 1.24e-17 | 20 |
trachea | 1.98e-13 | 3 |
respiratory airway | 1.98e-13 | 3 |
tracheobronchial tree | 1.98e-13 | 3 |
lower respiratory tract | 1.98e-13 | 3 |
foregut | 9.41e-13 | 80 |
mouth | 4.58e-09 | 2 |
oral opening | 4.58e-09 | 2 |
stomodeum | 4.58e-09 | 2 |
subdivision of digestive tract | 5.59e-08 | 114 |
digestive system | 8.74e-08 | 116 |
digestive tract | 8.74e-08 | 116 |
primitive gut | 8.74e-08 | 116 |
subdivision of trunk | 8.82e-08 | 66 |
endoderm-derived structure | 1.35e-07 | 118 |
endoderm | 1.35e-07 | 118 |
presumptive endoderm | 1.35e-07 | 118 |
primordium | 3.19e-07 | 134 |