FFCP PHASE1:Mm9::chr7:52409889..52409942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69748 | |EntrezGene=69748 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q571I9,D3Z0B9 | |UniProt=Q571I9,D3Z0B9 | ||
|association_with_transcript=0bp_to_ENSMUST00000007977,ENSMUST00000126618,NM_145954,uc009gtr.1,uc009gts.1,uc009gtt.1,uc009gtu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000007977,ENSMUST00000126618,NM_145954,uc009gtr.1,uc009gts.1,uc009gtt.1,uc009gtu.1_5end | ||
|cluster_id=chr7:52409889..52409942,- | |||
|description=CAGE_peak_1_at_Aldh16a1_5end | |description=CAGE_peak_1_at_Aldh16a1_5end | ||
|id=chr7:52409889..52409942,- | |id=chr7:52409889..52409942,- | ||
|ontology_enrichment_celltype=CL:0000063!3.03e-09!66;CL:0000066!2.83e-07!25;CL:0002563!4.45e-07!9;CL:0002251!4.45e-07!9;CL:0000223!6.75e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.83e-07,25;CL:0002563,4.45e-07,9;CL:0002251,4.45e-07,9;CL:0000223,6.75e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.30e-15!59;UBERON:0000160!1.57e-14!43;UBERON:0001007!1.64e-13!128;UBERON:0001555!1.64e-13!128;UBERON:0007026!1.64e-13!128;UBERON:0004119!7.87e-13!130;UBERON:0000925!7.87e-13!130;UBERON:0006595!7.87e-13!130;UBERON:0004921!1.75e-12!126;UBERON:0004185!1.75e-12!126;UBERON:0000344!7.45e-11!15;UBERON:0001242!1.47e-09!13;UBERON:0000060!1.47e-09!13;UBERON:0001262!1.47e-09!13;UBERON:0004786!1.47e-09!13;UBERON:0004923!6.19e-08!24;UBERON:0003350!4.45e-07!9;UBERON:0004808!4.45e-07!9;UBERON:0001277!4.45e-07!9;UBERON:0005172!5.66e-07!49;UBERON:0005173!5.66e-07!49;UBERON:0002417!5.66e-07!49;UBERON:0000916!5.66e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.62e-17,31;UBERON:0005409,2.02e-16,47;UBERON:0001007,2.70e-13,116;UBERON:0001555,2.70e-13,116;UBERON:0007026,2.70e-13,116;UBERON:0004119,1.39e-12,118;UBERON:0000925,1.39e-12,118;UBERON:0006595,1.39e-12,118;UBERON:0004921,2.89e-12,114;UBERON:0000344,7.45e-11,15;UBERON:0001242,1.47e-09,13;UBERON:0001262,1.47e-09,13;UBERON:0004786,1.47e-09,13;UBERON:0004923,6.19e-08,24;UBERON:0003350,4.45e-07,9;UBERON:0004808,4.45e-07,9;UBERON:0001277,4.45e-07,9;UBERON:0005172,5.66e-07,49;UBERON:0005173,5.66e-07,49;UBERON:0002417,5.66e-07,49;UBERON:0000916,5.66e-07,49 | |||
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| ||
|short_description=p1@Aldh16a1 | |short_description=p1@Aldh16a1 | ||
}} | }} |
Latest revision as of 20:50, 26 September 2015
Short description: | p1@Aldh16a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aldh16a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000007977, ENSMUST00000126618, NM_145954, uc009gtr.1, uc009gts.1, uc009gtt.1, uc009gtu.1_5end |
EntrezGene: | Aldh16a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.83e-07 | 25 |
intestinal epithelial cell | 4.45e-07 | 9 |
epithelial cell of alimentary canal | 4.45e-07 | 9 |
endodermal cell | 6.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.62e-17 | 31 |
gastrointestinal system | 2.02e-16 | 47 |
digestive system | 2.70e-13 | 116 |
digestive tract | 2.70e-13 | 116 |
primitive gut | 2.70e-13 | 116 |
endoderm-derived structure | 1.39e-12 | 118 |
endoderm | 1.39e-12 | 118 |
presumptive endoderm | 1.39e-12 | 118 |
subdivision of digestive tract | 2.89e-12 | 114 |
mucosa | 7.45e-11 | 15 |
intestinal mucosa | 1.47e-09 | 13 |
wall of intestine | 1.47e-09 | 13 |
gastrointestinal system mucosa | 1.47e-09 | 13 |
organ component layer | 6.19e-08 | 24 |
epithelium of mucosa | 4.45e-07 | 9 |
gastrointestinal system epithelium | 4.45e-07 | 9 |
intestinal epithelium | 4.45e-07 | 9 |
abdomen element | 5.66e-07 | 49 |
abdominal segment element | 5.66e-07 | 49 |
abdominal segment of trunk | 5.66e-07 | 49 |
abdomen | 5.66e-07 | 49 |