FFCP PHASE1:Mm9::chr8:26127778..26127792,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69742 | |EntrezGene=69742 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=641 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R0I4 | |UniProt=Q8R0I4 | ||
|association_with_transcript=95bp_to_ENSMUST00000033961,NM_027194,uc009lfm.2,uc009lfn.2_5end | |association_with_transcript=95bp_to_ENSMUST00000033961,NM_027194,uc009lfm.2,uc009lfn.2_5end | ||
|cluster_id=chr8:26127778..26127792,+ | |||
|description=CAGE_peak_2_at_Tm2d2_5end | |description=CAGE_peak_2_at_Tm2d2_5end | ||
|id=chr8:26127778..26127792,+ | |id=chr8:26127778..26127792,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.60e-14!50;CL:0000144!6.08e-13!121;CL:0000012!6.08e-13!121;CL:0000548!2.39e-12!115;CL:0000004!2.39e-12!115;CL:0000255!2.39e-12!115;CL:0002321!3.06e-12!70;CL:0000220!3.06e-12!70;CL:0002371!3.92e-12!118;CL:0000723!2.97e-11!91;CL:0000048!2.97e-11!91;CL:0000034!5.11e-11!97;CL:0000221!2.02e-10!44;CL:0000133!2.02e-10!44;CL:0002319!2.02e-10!43;CL:0000393!2.48e-09!39;CL:0000211!2.48e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.18e-12,70;CL:0000723,2.31e-11,91;CL:0000048,2.31e-11,91;CL:0000034,3.66e-11,97;CL:0002319,1.43e-10,43;CL:0000221,1.44e-10,44;CL:0000133,1.44e-10,44;CL:0000393,1.78e-09,39;CL:0000211,1.78e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.34e-10!75;UBERON:0001016!6.34e-10!75;UBERON:0001017!7.61e-10!73;UBERON:0005743!7.61e-10!73;UBERON:0002346!6.32e-07!71;UBERON:0003075!6.32e-07!71;UBERON:0007284!6.32e-07!71;UBERON:0004121!8.54e-07!102;UBERON:0000924!8.54e-07!102;UBERON:0006601!8.54e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.41e-10,75;UBERON:0001017,6.49e-10,73;UBERON:0002346,4.66e-07,64;UBERON:0003075,4.66e-07,64;UBERON:0007284,4.66e-07,64;UBERON:0004121,8.49e-07,95;UBERON:0000924,8.49e-07,95;UBERON:0006601,8.49e-07,95 | |||
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|phase1_expression=1.76163731815273,0.348975407639361,1.36499771816861,1.51232105653415,2.00358291978539,2.18243053485457,2.10251376535973,0.645616617207881,0.84473233291,1.40438715793196,0.68487187290202,0.398860794976682,0.684802919724823,0.262261207256992,0.999329285446988,0.404950534779652,1.39912375625629,2.36596624018678,2.4680598049033,2.97072756258621,6.54833334163237,1.78723712161594,1.82839852397255,2.55987876469451,4.81759490241057,1.72269589234506,3.01533397311352,1.72376986148711,3.23039813075836,2.01624103807945,4.21287970245079,1.27006134691926,0.61506478758457,0,1.73310971850765,1.49611180822643,2.24586291888606,1.67412652294763,2.3440060335714,1.57057123192139,1.76469446409304,0,3.88408282424923,4.28049181116963,4.8660926985367,7.70896359079063,16.4302182313088,5.45062890951116,9.88587822305123,10.1103547518627,7.69925318939494,7.18762821824858,5.70460860596304,2.90144856804538,4.36921938885203,15.4355661621568,6.5902691185914,9.28209766099396,5.66486090406874,5.28990979272033,3.1691570175309,10.8430250262122,8.00365316500025,26.996991518442,16.8107281636386,27.7087244828979,4.49400165777607,6.91592949578798,3.00699875694585,3.37514845829227,5.25812403378455,3.99911378165325,4.63823935998388,2.44981598429908,1.72521847832825,3.67687514644008,0,2.68143409978894,2.4577045320999,5.80299666012853,5.03182039813253,4.68822033501084,3.62937898701795,3.37657566019008,2.13917546887534,3.53554302568401,3.27454865837937,6.71038004971082,3.48340489332647,1.66257432234928,2.02905142091174,6.88339101585109,4.0798280022465,9.17495425784289,8.4470934268197,3.58421509677868,4.49422144421606,3.40860645156115,4.67614808285164,5.65343319216544,2.25349471642689,1.28326477414318,0,0,8.22665955842614,9.88103475352884,12.1325866803548,4.79572294820052,0.258937883647172,2.07818994690755,2.08182392119363,1.82679286987285,1.84492397804847,1.3565037649736,2.23418543557839,3.01599819191221,1.97755974187499,1.01219549843938,0,0.970601099684455,1.54589062922275,1.45462575940567,7.45567044872489,1.46390398505774,0.628340120440365,1.27728527604296,4.43315960671905,4.19931911695385,4.95573885584952,1.49790639404823,2.28750301409313,1.7591609295801,1.91206752211504,3.3243009452943,3.32460871295296,2.27137768294861,1.52759045775474,2.98576729464223,2.27450482590307,1.26265113531884,2.86264974517948,2.5289231487682,1.98068342785884,3.16480117455002,1.36072998302656,2.94661556655154,1.49922759295566,1.81092359517311,4.74249584452253,1.89106080167819,2.11141348996739,1.97276159184817,1.94633074457919,1.0447564995665,0.823128545631774,1.79130840136644,4.21327912387941,2.31613116403244,2.27330799516474,1.86413195281952,2.11073453982987,2.34080679899319,2.13070262026689,1.96764231747404,1.69693824176116,1.16266972375204,2.14618721119695,1.86824547787471,1.81015834904829,1.31333971263276,1.94565142910054,1.16959989940266,0.658650345873152,1.20785776884335,1.89260953707715,1.85228302282712,0.660837565967596,0.528901133327089,2.77274725695804,1.62565670302307,1.28867461322093,1.21010114774006,0.667134131534611,0.570676878337677,3.79623249235609,1.31759163779209,1.75934646160189,1.59165177632921,2.9244613067868,0.898819408654221,1.08069024937347,0.796565093017469,5.12103332573321,3.19895835307241,1.1270773567308,3.25842124552503,3.29719228184964,4.34842083319975,7.27220176928959,6.7900668070617,8.94892748695836,11.7227305725711,5.92905254174298,1.33476084572875,1.17935397067922,1.12431056192427,0.608580364165509,0.964708639009667,1.78238096246994,1.43848068725405,2.10775794807546,2.19649130550465,1.43768206527355,1.48856379067401,2.80833905803104,1.76805214562978,1.61457672169721,7.71909634181387,1.47802552133284,3.41084541186873,1.30371981153621,2.03694102930226,1.87752198630802,0.335012514883631,2.61848004974615,2.34160377429359,1.89162172927429,1.55025282754142,1.91345722388985,2.45794972073607,1.38147985492716,3.7608755231193,9.04747703635634,19.5806046174735,1.47529281905711,1.37968373152366,2.56880943980467,3.7507739709505,1.96721934452011,1.76729649043061,4.41711507182759,3.51394869866975,3.66219776145758,2.15071918157297,1.78238939265915,2.83076530788832,5.66734982344852,2.63030272120181,1.58115111178609,2.24924921495265,2.41298144854057,1.95872164033981,2.93196526836437,1.97964147567043,1.32745138339963,2.6705869977048,1.209294227859,0.565815239267694,3.2483208216885,1.53717573971964,0.775284879504663,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,3.06395645178409,2.34079422240703,3.10460841078611,2.35770738534752,2.48276327099183,1.24858172321449,2.46823530903181,3.34911444026059,1.17335854031855,2.1183207086382,3.52845436887939,0.65954501176592,0.645857706783622,1.08563264870681,1.3130957840345,0.656563598980245,2.04036585640896,1.11255181206306,0.512612642393558,1.65109494370578,1.11116716421827,0.376736914009382,1.0935538217682,0.228778173206523,2.37969801991397,4.19854356970974,3.86959926652387,1.90934123603023,1.26534397432454,1.21991680276109,1.29606408986162,1.25452977608681,1.310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| ||
|short_description=p2@Tm2d2 | |short_description=p2@Tm2d2 | ||
}} | }} |
Latest revision as of 20:50, 1 October 2015
Short description: | p2@Tm2d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tm2d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:641 |
Association with transcript: | 95bp_to_ENSMUST00000033961, NM_027194, uc009lfm.2, uc009lfn.2_5end |
EntrezGene: | Tm2d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.18e-12 | 70 |
somatic stem cell | 2.31e-11 | 91 |
multi fate stem cell | 2.31e-11 | 91 |
stem cell | 3.66e-11 | 97 |
neural cell | 1.43e-10 | 43 |
ectodermal cell | 1.44e-10 | 44 |
neurectodermal cell | 1.44e-10 | 44 |
electrically responsive cell | 1.78e-09 | 39 |
electrically active cell | 1.78e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.41e-10 | 75 |
central nervous system | 6.49e-10 | 73 |
neurectoderm | 4.66e-07 | 64 |
neural plate | 4.66e-07 | 64 |
presumptive neural plate | 4.66e-07 | 64 |
ectoderm-derived structure | 8.49e-07 | 95 |
ectoderm | 8.49e-07 | 95 |
presumptive ectoderm | 8.49e-07 | 95 |