FFCP PHASE1:Mm9::chr17:35196090..35196101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=51793 | |EntrezGene=51793 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1534 | |||
|TSSclassifier=NA | |||
|UniProt=O08972 | |UniProt=O08972 | ||
|association_with_transcript=44bp_to_ENSMUST00000174493_5end | |association_with_transcript=44bp_to_ENSMUST00000174493_5end | ||
|cluster_id=chr17:35196090..35196101,+ | |||
|description=CAGE_peak_4_at_Ddah2_5end | |description=CAGE_peak_4_at_Ddah2_5end | ||
|id=chr17:35196090..35196101,+ | |id=chr17:35196090..35196101,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.31e-10!44;CL:0000133!2.31e-10!44;CL:0002319!8.62e-10!43;CL:0000540!5.86e-09!33;CL:0000047!5.86e-09!33;CL:0000031!5.86e-09!33;CL:0000404!5.86e-09!33;CL:0000055!1.36e-07!50;CL:0000393!4.21e-07!39;CL:0000211!4.21e-07!39 | |ontology_enrichment_celltype=CL:0000221!2.31e-10!44;CL:0000133!2.31e-10!44;CL:0002319!8.62e-10!43;CL:0000540!5.86e-09!33;CL:0000047!5.86e-09!33;CL:0000031!5.86e-09!33;CL:0000404!5.86e-09!33;CL:0000055!1.36e-07!50;CL:0000393!4.21e-07!39;CL:0000211!4.21e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.18e-16,44;CL:0000133,5.18e-16,44;CL:0002319,5.15e-15,43;CL:0000540,6.41e-14,33;CL:0000047,6.41e-14,33;CL:0000031,6.41e-14,33;CL:0000404,6.41e-14,33;CL:0000393,1.13e-10,39;CL:0000211,1.13e-10,39;CL:0000117,1.33e-08,23;CL:0000337,1.33e-08,23;CL:0002609,6.59e-08,6;CL:0002321,1.54e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.02e-10,95;UBERON:0000924,1.02e-10,95;UBERON:0006601,1.02e-10,95;UBERON:0001017,1.30e-08,73;UBERON:0001016,3.82e-08,75;UBERON:0000020,4.24e-08,12;UBERON:0001032,4.24e-08,12;UBERON:0004456,4.24e-08,12;UBERON:0000970,2.10e-07,9;UBERON:0000019,2.10e-07,9;UBERON:0000047,2.10e-07,9;UBERON:0010312,2.10e-07,9;UBERON:0004088,2.10e-07,9;UBERON:0002104,2.10e-07,9;UBERON:0001456,2.10e-07,9;UBERON:0003072,2.10e-07,9;UBERON:0004128,2.10e-07,9;UBERON:0003071,2.10e-07,9;UBERON:0000033,2.78e-07,13;UBERON:0005085,2.78e-07,13;UBERON:0002346,8.61e-07,64;UBERON:0003075,8.61e-07,64;UBERON:0007284,8.61e-07,64 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.630924330716475,0.137114433605739,0.42438965179803,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,2.18025156380447,0.659058548203415,0.388859798148567,1.1198913730029,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0,2.02316460859598,2.64495489636016,2.53532561402472,1.0165335962074,1.77858959222228,0,0,0,2.39680088414724,2.68952813725088,3.31806759387129,7.2903206699113,5.04779907243317,0.856952953211411,1.10434270475807,1.83736198822431,2.01275489138296,1.83843757322004,1.10115880999389,0,0,1.84640802822271,2.10421580285542,2.08365348222704,0,0.56276261003168,0,0,0.569486723196412,1.4911955666024,0,0.377857800533928,1.44932244350839,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,3.38024207464033,0,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0,1.38788261412909,0.608930956624282,0.922461989024234,0.904335843315735,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0.479260498023681,0,0.254140454146129,0,0,0.251308704225729,0,0,0.20778804455956,0,0.611036183101898,0.248813941220186,0,0,3.25301107406759,6.89706313300419,5.40186389416048,3.61691562805716,2.31324097114515,3.84341160854549,4.40398105430725,0.258703370739016,1.72454394346274,1.32374256117473,1.23165786914764,1.09597866213787,1.66828349535359,1.0447564995665,0.823128545631774,0.995171334092466,0,0,0,1.65700618028402,1.17263029990548,1.44049649168812,0.946978942340841,1.18058539048442,0.925602677324269,0.465067889500816,0,0.350296027101508,0.16455984991348,0.492502392237286,0.405344047729279,0.584799949701329,0.219550115291051,0.134206418760372,0.210289948564127,0.92614151141356,0,0.264450566663544,2.13288250535234,0.928946687441754,0.644337306610467,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,0.251335208800269,0,0,0.898819408654221,0.216138049874694,0,1.89667900953082,1.82797620175566,1.1270773567308,0.610953983535943,0.775809948670503,0.701358198903186,0.442655759869801,0,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,1.51593129416388,0.977789858652155,1.01847051465113,1.17345124144251,1.84256883185997,0.714130922658041,1.75620283072019,0.945810864637146,1.99318220683897,1.11618338060241,0.81931657357869,0.345369963731791,0.723245292907558,0,0,0,0,0,0.117211686592203,0.983609672260053,0.757412781613119,2.2085575359138,1.95219372148319,1.72338718186239,0.716906393857656,2.00518806674155,2.54768877709949,2.02405350837447,2.33804686329049,0.790575555893047,0.321321316421807,0.283880170416537,1.95872164033981,1.62886959353576,0.164970122972535,0,0.971122544619926,0.302323556964751,0.754420319023592,0,0.307435147943927,0.258428293168221,1.09060118843252,0,0,0,0,0,2.52085531643834,4.65691261617916,2.14337035031592,0.709360934569094,1.96205699362278,0.987294123612726,0.913394847343798,0,0.63549621259146,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0.82554747185289,0.740778109478847,0.188368457004691,0.136694227721025,0,0.509935289981566,0,0.829199842826543,0,1.42351197111511,0.813277868507395,0.540026704109006,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.448549638131936,1.32366792365678,0.972255941720238,1.93739735216597,1.18269287843545,0.704143431874524,0.39061315453185,0.524296722128554,0,0.288030006257865,0.316011120628178,1.21635129174099,0.513554785824136,0.25984164595559,0.179026695667481,0.596044064343795,0,0.295379054349154,0,0,0.201652370273681,0.194915761479505,0.288635524920988,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,3.84013186061454,2.39414924040619,1.53660245178721,1.21553358534147,1.25767897576789,0.919217542250071,0.666740183404846,0.618105171716683,0.64183841918363,1.01078884705519,1.01391719956096,0.943131706930381,0.655490552289177,0.960377286073039,0.631790158511746,1.42888107384922,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,1.71434626192708,0.887379030796687,0.953744759789284,0.872078499793971,1.03520318456864,0.676916863133412,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.237270036248348,0.394017929502254,0,0.309873682371932,0.578719832943424,0,0.701794825336225,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421 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| ||
|short_description=p4@Ddah2 | |short_description=p4@Ddah2 | ||
}} | }} |
Latest revision as of 09:19, 26 September 2015
Short description: | p4@Ddah2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ddah2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1534 |
Association with transcript: | 44bp_to_ENSMUST00000174493_5end |
EntrezGene: | Ddah2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.18e-16 | 44 |
neurectodermal cell | 5.18e-16 | 44 |
neural cell | 5.15e-15 | 43 |
neuron | 6.41e-14 | 33 |
neuronal stem cell | 6.41e-14 | 33 |
neuroblast | 6.41e-14 | 33 |
electrically signaling cell | 6.41e-14 | 33 |
electrically responsive cell | 1.13e-10 | 39 |
electrically active cell | 1.13e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.33e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-08 | 23 |
neuron of cerebral cortex | 6.59e-08 | 6 |
embryonic cell | 1.54e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.02e-10 | 95 |
ectoderm | 1.02e-10 | 95 |
presumptive ectoderm | 1.02e-10 | 95 |
central nervous system | 1.30e-08 | 73 |
nervous system | 3.82e-08 | 75 |
sense organ | 4.24e-08 | 12 |
sensory system | 4.24e-08 | 12 |
entire sense organ system | 4.24e-08 | 12 |
eye | 2.10e-07 | 9 |
camera-type eye | 2.10e-07 | 9 |
simple eye | 2.10e-07 | 9 |
immature eye | 2.10e-07 | 9 |
ocular region | 2.10e-07 | 9 |
visual system | 2.10e-07 | 9 |
face | 2.10e-07 | 9 |
optic cup | 2.10e-07 | 9 |
optic vesicle | 2.10e-07 | 9 |
eye primordium | 2.10e-07 | 9 |
head | 2.78e-07 | 13 |
ectodermal placode | 2.78e-07 | 13 |
neurectoderm | 8.61e-07 | 64 |
neural plate | 8.61e-07 | 64 |
presumptive neural plate | 8.61e-07 | 64 |