FFCP PHASE1:Hg19::chr2:238322770..238322791,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.93e-45!180;CL:0000057!1.31e-29!75;CL:0000183!7.47e-20!59;CL:0000680!4.11e-19!57;CL:0000056!4.11e-19!57;CL:0000355!4.11e-19!57;CL:0000187!1.03e-18!54;CL:0000393!1.92e-15!60;CL:0000211!1.92e-15!60;CL:0000192!1.57e-13!42;CL:0000514!1.57e-13!42;CL:0002620!6.71e-13!23;CL:0000048!5.69e-11!430;CL:0000723!4.97e-10!436;CL:0000034!3.38e-09!444;CL:0000359!3.49e-09!32;CL:0002371!6.65e-07!591 | |ontology_enrichment_celltype=CL:0000055!5.93e-45!180;CL:0000057!1.31e-29!75;CL:0000183!7.47e-20!59;CL:0000680!4.11e-19!57;CL:0000056!4.11e-19!57;CL:0000355!4.11e-19!57;CL:0000187!1.03e-18!54;CL:0000393!1.92e-15!60;CL:0000211!1.92e-15!60;CL:0000192!1.57e-13!42;CL:0000514!1.57e-13!42;CL:0002620!6.71e-13!23;CL:0000048!5.69e-11!430;CL:0000723!4.97e-10!436;CL:0000034!3.38e-09!444;CL:0000359!3.49e-09!32;CL:0002371!6.65e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.68e-13;23!CL:0000057;6.47e-13;73!CL:0000187;1.39e-11;55!CL:0000134;8.80e-11;55!CL:0000723;1.24e-10;61!CL:0000192;1.28e-10;43!CL:0000048;7.13e-10;58!CL:0002320;1.02e-09;188!CL:0000393;2.10e-09;61!CL:0000211;2.10e-09;61!CL:0000359;4.23e-09;32!CL:0000034;3.40e-07;69!CL:0002570;5.40e-07;8!CL:0002494;6.52e-07;16 | |ontology_enrichment_celltype_v019=CL:0002620;1.68e-13;23!CL:0000057;6.47e-13;73!CL:0000187;1.39e-11;55!CL:0000134;8.80e-11;55!CL:0000723;1.24e-10;61!CL:0000192;1.28e-10;43!CL:0000048;7.13e-10;58!CL:0002320;1.02e-09;188!CL:0000393;2.10e-09;61!CL:0000211;2.10e-09;61!CL:0000359;4.23e-09;32!CL:0000034;3.40e-07;69!CL:0002570;5.40e-07;8!CL:0002494;6.52e-07;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.22e-32,76;CL:0000680,9.84e-21,58;CL:0000056,9.84e-21,58;CL:0000355,9.84e-21,58;CL:0000187,2.56e-20,55;CL:0000393,1.38e-16,61;CL:0000211,1.38e-16,61;CL:0000048,1.85e-15,427;CL:0000192,7.90e-15,43;CL:0000514,7.90e-15,43;CL:0000723,3.07e-14,433;CL:0002620,1.70e-13,23;CL:0000034,6.45e-13,441;CL:0000359,1.38e-09,32;CL:0002570,5.40e-07,8;CL:0002494,6.59e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;1.96e-11;58!CL:0000514;1.28e-10;43 | |ontology_enrichment_development_v019=CL:0000355;1.96e-11;58!CL:0000514;1.28e-10;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.02e-25!83;UBERON:0002329!1.02e-25!83;UBERON:0003077!1.02e-25!83;UBERON:0003059!1.02e-25!83;UBERON:0007282!1.02e-25!83;UBERON:0009618!1.02e-25!83;UBERON:0007285!1.02e-25!83;UBERON:0004290!6.58e-23!70;UBERON:0005256!3.25e-20!143;UBERON:0002385!1.20e-19!63;UBERON:0001015!1.20e-19!63;UBERON:0000383!1.20e-19!63;UBERON:0001134!1.93e-19!61;UBERON:0002036!1.93e-19!61;UBERON:0003082!1.93e-19!61;UBERON:0000486!1.30e-18!82;UBERON:0000475!2.23e-16!365;UBERON:0002100!1.31e-12!216;UBERON:0003102!1.39e-12!95;UBERON:0000481!1.09e-11!347;UBERON:0002199!3.27e-11!45;UBERON:0002416!3.27e-11!45;UBERON:0003104!2.21e-09!238;UBERON:0009142!2.21e-09!238;UBERON:0002097!3.40e-09!40;UBERON:0000468!4.29e-09!659;UBERON:0004872!9.08e-09!84;UBERON:0001013!6.47e-08!14;UBERON:0000479!9.47e-08!787;UBERON:0007100!1.00e-07!27;UBERON:0000948!1.33e-07!24;UBERON:0005498!1.33e-07!24;UBERON:0004140!1.33e-07!24;UBERON:0009881!1.33e-07!24;UBERON:0004141!1.33e-07!24;UBERON:0003084!1.33e-07!24;UBERON:0007005!1.33e-07!24;UBERON:0004139!1.33e-07!24;UBERON:0004291!1.33e-07!24;UBERON:0003914!1.59e-07!118;UBERON:0000119!5.95e-07!312;UBERON:0000490!6.14e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!1.02e-25!83;UBERON:0002329!1.02e-25!83;UBERON:0003077!1.02e-25!83;UBERON:0003059!1.02e-25!83;UBERON:0007282!1.02e-25!83;UBERON:0009618!1.02e-25!83;UBERON:0007285!1.02e-25!83;UBERON:0004290!6.58e-23!70;UBERON:0005256!3.25e-20!143;UBERON:0002385!1.20e-19!63;UBERON:0001015!1.20e-19!63;UBERON:0000383!1.20e-19!63;UBERON:0001134!1.93e-19!61;UBERON:0002036!1.93e-19!61;UBERON:0003082!1.93e-19!61;UBERON:0000486!1.30e-18!82;UBERON:0000475!2.23e-16!365;UBERON:0002100!1.31e-12!216;UBERON:0003102!1.39e-12!95;UBERON:0000481!1.09e-11!347;UBERON:0002199!3.27e-11!45;UBERON:0002416!3.27e-11!45;UBERON:0003104!2.21e-09!238;UBERON:0009142!2.21e-09!238;UBERON:0002097!3.40e-09!40;UBERON:0000468!4.29e-09!659;UBERON:0004872!9.08e-09!84;UBERON:0001013!6.47e-08!14;UBERON:0000479!9.47e-08!787;UBERON:0007100!1.00e-07!27;UBERON:0000948!1.33e-07!24;UBERON:0005498!1.33e-07!24;UBERON:0004140!1.33e-07!24;UBERON:0009881!1.33e-07!24;UBERON:0004141!1.33e-07!24;UBERON:0003084!1.33e-07!24;UBERON:0007005!1.33e-07!24;UBERON:0004139!1.33e-07!24;UBERON:0004291!1.33e-07!24;UBERON:0003914!1.59e-07!118;UBERON:0000119!5.95e-07!312;UBERON:0000490!6.14e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.37e-10;31!UBERON:0001015;1.37e-10;31!UBERON:0000383;1.37e-10;31!UBERON:0002384;2.14e-10;198!UBERON:0002204;2.77e-08;70!UBERON:0001013;3.00e-08;14!UBERON:0002199;7.46e-08;46!UBERON:0002416;7.46e-08;46!UBERON:0002097;1.54e-07;41!UBERON:0007100;1.60e-07;25!UBERON:0000948;2.16e-07;22!UBERON:0003102;5.73e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0002385;1.37e-10;31!UBERON:0001015;1.37e-10;31!UBERON:0000383;1.37e-10;31!UBERON:0002384;2.14e-10;198!UBERON:0002204;2.77e-08;70!UBERON:0001013;3.00e-08;14!UBERON:0002199;7.46e-08;46!UBERON:0002416;7.46e-08;46!UBERON:0002097;1.54e-07;41!UBERON:0007100;1.60e-07;25!UBERON:0000948;2.16e-07;22!UBERON:0003102;5.73e-07;50 | ||
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| ||
|short_description=p2@COL6A3 | |short_description=p2@COL6A3 | ||
}} | }} |
Revision as of 03:10, 18 November 2012
Short description: | p2@COL6A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_COL6A3_5end |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | 0bp_to_ENST00000472056_5end |
EntrezGene: | COL6A3 |
HGNC: | 2213 |
UniProt: | E9PFQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.22e-32 | 76 |
muscle precursor cell | 9.84e-21 | 58 |
myoblast | 9.84e-21 | 58 |
multi-potent skeletal muscle stem cell | 9.84e-21 | 58 |
muscle cell | 2.56e-20 | 55 |
electrically responsive cell | 1.38e-16 | 61 |
electrically active cell | 1.38e-16 | 61 |
multi fate stem cell | 1.85e-15 | 427 |
smooth muscle cell | 7.90e-15 | 43 |
smooth muscle myoblast | 7.90e-15 | 43 |
somatic stem cell | 3.07e-14 | 433 |
skin fibroblast | 1.70e-13 | 23 |
stem cell | 6.45e-13 | 441 |
vascular associated smooth muscle cell | 1.38e-09 | 32 |
mesenchymal stem cell of adipose | 5.40e-07 | 8 |
cardiocyte | 6.59e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.