FFCP PHASE1:Hg19::chr21:47423457..47423466,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.53e-38!180;CL:0000057!6.25e-23!75;CL:0000183!4.39e-15!59;CL:0000680!1.75e-14!57;CL:0000056!1.75e-14!57;CL:0000355!1.75e-14!57;CL:0000187!1.84e-14!54;CL:0000393!1.03e-13!60;CL:0000211!1.03e-13!60;CL:0000048!5.64e-12!430;CL:0000192!6.75e-12!42;CL:0000514!6.75e-12!42;CL:0000723!2.06e-11!436;CL:0000034!2.74e-11!444;CL:0002620!6.37e-11!23;CL:0000499!1.44e-09!27;CL:0002371!3.07e-08!591;CL:0000327!3.62e-08!14;CL:0002570!4.63e-08!8;CL:0000359!2.28e-07!32;CL:0002334!6.69e-07!12 | |ontology_enrichment_celltype=CL:0000055!5.53e-38!180;CL:0000057!6.25e-23!75;CL:0000183!4.39e-15!59;CL:0000680!1.75e-14!57;CL:0000056!1.75e-14!57;CL:0000355!1.75e-14!57;CL:0000187!1.84e-14!54;CL:0000393!1.03e-13!60;CL:0000211!1.03e-13!60;CL:0000048!5.64e-12!430;CL:0000192!6.75e-12!42;CL:0000514!6.75e-12!42;CL:0000723!2.06e-11!436;CL:0000034!2.74e-11!444;CL:0002620!6.37e-11!23;CL:0000499!1.44e-09!27;CL:0002371!3.07e-08!591;CL:0000327!3.62e-08!14;CL:0002570!4.63e-08!8;CL:0000359!2.28e-07!32;CL:0002334!6.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002570;6.83e-17;8!CL:0000499;1.56e-13;28!CL:0000327;2.14e-09;15!CL:0000135;6.22e-08;3!CL:0000388;6.22e-08;3!CL:0002559;8.28e-08;5!CL:0000723;1.22e-07;61!CL:0002582;1.60e-07;3!CL:0002564;1.76e-07;3!CL:0000153;1.81e-07;9!CL:0000447;1.81e-07;9!CL:0000632;5.52e-07;3!CL:0000134;5.71e-07;55!CL:0002320;9.13e-07;188 | |ontology_enrichment_celltype_v019=CL:0002570;6.83e-17;8!CL:0000499;1.56e-13;28!CL:0000327;2.14e-09;15!CL:0000135;6.22e-08;3!CL:0000388;6.22e-08;3!CL:0002559;8.28e-08;5!CL:0000723;1.22e-07;61!CL:0002582;1.60e-07;3!CL:0002564;1.76e-07;3!CL:0000153;1.81e-07;9!CL:0000447;1.81e-07;9!CL:0000632;5.52e-07;3!CL:0000134;5.71e-07;55!CL:0002320;9.13e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0002570,6.28e-17,8;CL:0000499,1.01e-13,28;CL:0000057,5.17e-13,76;CL:0002320,1.19e-10,361;CL:0000048,1.75e-10,427;CL:0000723,4.38e-10,433;CL:0000034,1.43e-09,441;CL:0000327,1.96e-09,15;CL:0000134,3.62e-08,354;CL:0000135,5.62e-08,3;CL:0000388,5.62e-08,3;CL:0002559,7.82e-08,5;CL:0002564,1.05e-07,3;CL:0002582,1.37e-07,3;CL:0000153,1.40e-07,9;CL:0000447,1.40e-07,9;CL:0000632,7.22e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:17,6.64e-07,5;DOID:450,6.64e-07,5;DOID:66,6.64e-07,5;DOID:423,6.64e-07,5;DOID:0080000,6.64e-07,5;DOID:11722,6.64e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.82e-18!83;UBERON:0002329!6.82e-18!83;UBERON:0003077!6.82e-18!83;UBERON:0003059!6.82e-18!83;UBERON:0007282!6.82e-18!83;UBERON:0009618!6.82e-18!83;UBERON:0007285!6.82e-18!83;UBERON:0004290!4.64e-17!70;UBERON:0000486!1.81e-14!82;UBERON:0001134!1.38e-13!61;UBERON:0002036!1.38e-13!61;UBERON:0003082!1.38e-13!61;UBERON:0002385!1.16e-12!63;UBERON:0001015!1.16e-12!63;UBERON:0000383!1.16e-12!63;UBERON:0005256!2.08e-12!143;UBERON:0000475!1.42e-09!365;UBERON:0002199!9.67e-09!45;UBERON:0002416!9.67e-09!45;UBERON:0002100!1.35e-08!216;UBERON:0000481!2.15e-08!347;UBERON:0003102!4.85e-08!95;UBERON:0002097!9.00e-08!40;UBERON:0003104!5.44e-07!238;UBERON:0009142!5.44e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!6.82e-18!83;UBERON:0002329!6.82e-18!83;UBERON:0003077!6.82e-18!83;UBERON:0003059!6.82e-18!83;UBERON:0007282!6.82e-18!83;UBERON:0009618!6.82e-18!83;UBERON:0007285!6.82e-18!83;UBERON:0004290!4.64e-17!70;UBERON:0000486!1.81e-14!82;UBERON:0001134!1.38e-13!61;UBERON:0002036!1.38e-13!61;UBERON:0003082!1.38e-13!61;UBERON:0002385!1.16e-12!63;UBERON:0001015!1.16e-12!63;UBERON:0000383!1.16e-12!63;UBERON:0005256!2.08e-12!143;UBERON:0000475!1.42e-09!365;UBERON:0002199!9.67e-09!45;UBERON:0002416!9.67e-09!45;UBERON:0002100!1.35e-08!216;UBERON:0000481!2.15e-08!347;UBERON:0003102!4.85e-08!95;UBERON:0002097!9.00e-08!40;UBERON:0003104!5.44e-07!238;UBERON:0009142!5.44e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.97e-11;14!UBERON:0007846;6.22e-08;3!UBERON:0000043;6.22e-08;3!UBERON:0007845;6.22e-08;3!UBERON:0002073;8.28e-08;5!UBERON:0002384;1.64e-07;198!UBERON:0002242;1.76e-07;3!UBERON:0002199;8.08e-07;46!UBERON:0002416;8.08e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0001013;1.97e-11;14!UBERON:0007846;6.22e-08;3!UBERON:0000043;6.22e-08;3!UBERON:0007845;6.22e-08;3!UBERON:0002073;8.28e-08;5!UBERON:0002384;1.64e-07;198!UBERON:0002242;1.76e-07;3!UBERON:0002199;8.08e-07;46!UBERON:0002416;8.08e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.07e-11,14;UBERON:0002384,1.90e-10,371;UBERON:0002199,2.00e-09,46;UBERON:0002416,2.00e-09,46;UBERON:0007846,5.62e-08,3;UBERON:0000043,5.62e-08,3;UBERON:0007845,5.62e-08,3;UBERON:0002073,7.82e-08,5;UBERON:0005086,7.82e-08,5;UBERON:0002242,1.05e-07,3;UBERON:0003068,1.05e-07,3;UBERON:0002328,1.05e-07,3;UBERON:0004880,1.05e-07,3;UBERON:0003102,1.39e-07,99;UBERON:0003104,2.15e-07,160;UBERON:0009142,2.15e-07,160;UBERON:0005256,2.97e-07,122;UBERON:0002097,5.48e-07,41 | |||
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| ||
|short_description=p@chr21:47423457..47423466,+ | |short_description=p@chr21:47423457..47423466,+ | ||
}} | }} |
Revision as of 08:40, 18 November 2012
Short description: | p@chr21:47423457..47423466, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:47423457..47423466, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 6.28e-17 | 8 |
stromal cell | 1.01e-13 | 28 |
fibroblast | 5.17e-13 | 76 |
connective tissue cell | 1.19e-10 | 361 |
multi fate stem cell | 1.75e-10 | 427 |
somatic stem cell | 4.38e-10 | 433 |
stem cell | 1.43e-09 | 441 |
extracellular matrix secreting cell | 1.96e-09 | 15 |
mesenchymal cell | 3.62e-08 | 354 |
fibrocyte | 5.62e-08 | 3 |
tendon cell | 5.62e-08 | 3 |
hair follicle cell | 7.82e-08 | 5 |
nucleus pulposus cell of intervertebral disc | 1.05e-07 | 3 |
visceral preadipocyte | 1.37e-07 | 3 |
GAG secreting cell | 1.40e-07 | 9 |
carbohydrate secreting cell | 1.40e-07 | 9 |
hepatic stellate cell | 7.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.07e-11 | 14 |
connective tissue | 1.90e-10 | 371 |
integument | 2.00e-09 | 46 |
integumental system | 2.00e-09 | 46 |
dense regular connective tissue | 5.62e-08 | 3 |
tendon | 5.62e-08 | 3 |
regular connective tissue | 5.62e-08 | 3 |
hair follicle | 7.82e-08 | 5 |
hair follicle placode | 7.82e-08 | 5 |
nucleus pulposus | 1.05e-07 | 3 |
axial mesoderm | 1.05e-07 | 3 |
notochord | 1.05e-07 | 3 |
chordamesoderm | 1.05e-07 | 3 |
surface structure | 1.39e-07 | 99 |
mesenchyme | 2.15e-07 | 160 |
entire embryonic mesenchyme | 2.15e-07 | 160 |
trunk mesenchyme | 2.97e-07 | 122 |
skin of body | 5.48e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.64e-07 | 5 |
myotonic disease | 6.64e-07 | 5 |
muscle tissue disease | 6.64e-07 | 5 |
myopathy | 6.64e-07 | 5 |
muscular disease | 6.64e-07 | 5 |
myotonic dystrophy | 6.64e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.