FFCP PHASE1:Hg19::chr6:137482892..137482907,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000840!6.57e-13!5;CL:0001029!6.57e-13!5;CL:0000990!2.01e-11!8;CL:0000451!3.45e-09!10;CL:0001014!3.25e-07!2;CL:0001016!3.25e-07!2 | |ontology_enrichment_celltype=CL:0000840!6.57e-13!5;CL:0001029!6.57e-13!5;CL:0000990!2.01e-11!8;CL:0000451!3.45e-09!10;CL:0001014!3.25e-07!2;CL:0001016!3.25e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000840;5.09e-36;5!CL:0000990;5.29e-24;8!CL:0000451;1.27e-19;10!CL:0001014;2.66e-18;2!CL:0001016;2.66e-18;2!CL:0000453;7.46e-08;5 | |ontology_enrichment_celltype_v019=CL:0000840;5.09e-36;5!CL:0000990;5.29e-24;8!CL:0000451;1.27e-19;10!CL:0001014;2.66e-18;2!CL:0001016;2.66e-18;2!CL:0000453;7.46e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000840,5.10e-36,5;CL:0001029,5.10e-36,5;CL:0000990,5.30e-24,8;CL:0000451,1.27e-19,10;CL:0001014,2.66e-18,2;CL:0001016,2.66e-18,2;CL:0000453,7.46e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.86e-11;7!UBERON:0001045;5.31e-10;1 | |ontology_enrichment_development_v019=UBERON:0004872;3.86e-11;7!UBERON:0001045;5.31e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.08e-10!7;UBERON:0002106!3.68e-09!3;UBERON:0004854!3.68e-09!3;UBERON:0009034!3.68e-09!3;UBERON:0002095!3.68e-09!3;UBERON:0004782!3.68e-09!3;UBERON:0003281!3.68e-09!3;UBERON:0009664!3.68e-09!3;UBERON:0002296!3.68e-09!3;UBERON:0005602!3.68e-09!3;UBERON:0001179!3.68e-09!3;UBERON:0006293!3.68e-09!3;UBERON:0005409!2.30e-08!35 | |ontology_enrichment_uberon=UBERON:0004177!6.08e-10!7;UBERON:0002106!3.68e-09!3;UBERON:0004854!3.68e-09!3;UBERON:0009034!3.68e-09!3;UBERON:0002095!3.68e-09!3;UBERON:0004782!3.68e-09!3;UBERON:0003281!3.68e-09!3;UBERON:0009664!3.68e-09!3;UBERON:0002296!3.68e-09!3;UBERON:0005602!3.68e-09!3;UBERON:0001179!3.68e-09!3;UBERON:0006293!3.68e-09!3;UBERON:0005409!2.30e-08!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;2.28e-15;5!UBERON:0005057;2.28e-15;5!UBERON:0002106;5.73e-12;3!UBERON:0000160;2.60e-11;17!UBERON:0001154;5.31e-10;1!UBERON:0001153;5.31e-10;1!UBERON:0009854;5.31e-10;1!UBERON:0002372;7.18e-10;1!UBERON:0001961;7.18e-10;1!UBERON:0001744;7.18e-10;1!UBERON:0001042;7.18e-10;1!UBERON:0001735;7.18e-10;1!UBERON:0007029;1.01e-09;1!UBERON:0002171;1.76e-09;1!UBERON:0006518;1.76e-09;1!UBERON:0008949;1.76e-09;1!UBERON:0000101;1.76e-09;1!UBERON:0002167;1.76e-09;1!UBERON:0001155;7.24e-09;9!UBERON:0005409;8.09e-09;22!UBERON:0002108;1.96e-07;4!UBERON:0004921;2.08e-07;33!UBERON:0000059;2.44e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0004177;2.28e-15;5!UBERON:0005057;2.28e-15;5!UBERON:0002106;5.73e-12;3!UBERON:0000160;2.60e-11;17!UBERON:0001154;5.31e-10;1!UBERON:0001153;5.31e-10;1!UBERON:0009854;5.31e-10;1!UBERON:0002372;7.18e-10;1!UBERON:0001961;7.18e-10;1!UBERON:0001744;7.18e-10;1!UBERON:0001042;7.18e-10;1!UBERON:0001735;7.18e-10;1!UBERON:0007029;1.01e-09;1!UBERON:0002171;1.76e-09;1!UBERON:0006518;1.76e-09;1!UBERON:0008949;1.76e-09;1!UBERON:0000101;1.76e-09;1!UBERON:0002167;1.76e-09;1!UBERON:0001155;7.24e-09;9!UBERON:0005409;8.09e-09;22!UBERON:0002108;1.96e-07;4!UBERON:0004921;2.08e-07;33!UBERON:0000059;2.44e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.96e-15,25;UBERON:0002106,4.72e-12,3;UBERON:0004854,4.72e-12,3;UBERON:0009034,4.72e-12,3;UBERON:0002095,4.72e-12,3;UBERON:0004782,4.72e-12,3;UBERON:0003281,4.72e-12,3;UBERON:0009664,4.72e-12,3;UBERON:0002296,4.72e-12,3;UBERON:0005602,4.72e-12,3;UBERON:0001179,4.72e-12,3;UBERON:0006293,4.72e-12,3;UBERON:0000160,2.38e-11,17;UBERON:0004177,3.93e-11,7;UBERON:0005057,3.93e-11,7;UBERON:0001154,5.31e-10,1;UBERON:0001153,5.31e-10,1;UBERON:0001045,5.31e-10,1;UBERON:0002372,7.50e-10,1;UBERON:0001961,7.50e-10,1;UBERON:0001744,7.50e-10,1;UBERON:0001735,7.50e-10,1;UBERON:0007029,9.70e-10,1;UBERON:0002171,1.36e-09,1;UBERON:0006518,1.36e-09,1;UBERON:0008949,1.36e-09,1;UBERON:0000101,1.36e-09,1;UBERON:0002167,1.36e-09,1;UBERON:0002405,5.34e-09,93;UBERON:0001155,5.99e-09,9;UBERON:0002193,1.64e-07,108;UBERON:0000059,2.09e-07,11;UBERON:0002108,2.16e-07,4;UBERON:0002390,6.50e-07,98;UBERON:0003061,6.50e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.8402559624182,42.1393964264227,60.3629140755648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,1.17002132569619,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.313359791546046,5.01268954180134,0,0.321176150207399,0,0.425846237690326,10.3051603426729,0,0,0,5.66625476665917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,16.0244671008066,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,1.99052386215701,0,1.22206028986725,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,57.3683423456326,7.7380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,1.24271716604159,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,6.21880614987285,0,0,0,0,0,0,0.877136198314828,0,0.964570191354574,0,0,0,0,0,0,0.132864840313363,0,0,0.491545817507439,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0.231522474323834,1.09279780251979,0,0,0,0,0,0,0,2.25561403151649,1.28915775947154,0.199882311849858,0,0,0,0,0.917458566809082,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,1.0334225573761,0.434523000071005,0.112131862580613,0,0.202117188958219,0,0,6.19638887734205,0.286888821570705,0,0,0.320182037633146,0,0,0,0,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.8402559624182,42.1393964264227,60.3629140755648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,1.17002132569619,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.313359791546046,5.01268954180134,0,0.321176150207399,0,0.425846237690326,10.3051603426729,0,0,0,5.66625476665917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,16.0244671008066,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,1.99052386215701,0,1.22206028986725,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,57.3683423456326,7.7380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,1.24271716604159,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,6.21880614987285,0,0,0,0,0,0,0.877136198314828,0,0.964570191354574,0,0,0,0,0,0,0.132864840313363,0,0,0.491545817507439,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0.231522474323834,1.09279780251979,0,0,0,0,0,0,0,2.25561403151649,1.28915775947154,0.199882311849858,0,0,0,0,0.917458566809082,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,1.0334225573761,0.434523000071005,0.112131862580613,0,0.202117188958219,0,0,6.19638887734205,0.286888821570705,0,0,0.320182037633146,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p1@IL22RA2 | |short_description=p1@IL22RA2 | ||
}} | }} |
Revision as of 07:48, 19 November 2012
Short description: | p1@IL22RA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IL22RA2_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_AJ297262_5end |
EntrezGene: | IL22RA2 |
HGNC: | 14901 |
UniProt: | Q969J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 5.10e-36 | 5 |
common dendritic progenitor | 5.10e-36 | 5 |
conventional dendritic cell | 5.30e-24 | 8 |
dendritic cell | 1.27e-19 | 10 |
CD1a-positive Langerhans cell | 2.66e-18 | 2 |
immature CD1a-positive Langerhans cell | 2.66e-18 | 2 |
Langerhans cell | 7.46e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.96e-15 | 25 |
spleen | 4.72e-12 | 3 |
gastrointestinal system mesentery | 4.72e-12 | 3 |
stomach region | 4.72e-12 | 3 |
mesentery | 4.72e-12 | 3 |
gastrointestinal system serosa | 4.72e-12 | 3 |
mesentery of stomach | 4.72e-12 | 3 |
gut mesentery | 4.72e-12 | 3 |
dorsal mesentery | 4.72e-12 | 3 |
dorsal mesogastrium | 4.72e-12 | 3 |
peritoneal cavity | 4.72e-12 | 3 |
spleen primordium | 4.72e-12 | 3 |
intestine | 2.38e-11 | 17 |
hemopoietic organ | 3.93e-11 | 7 |
immune organ | 3.93e-11 | 7 |
vermiform appendix | 5.31e-10 | 1 |
caecum | 5.31e-10 | 1 |
midgut | 5.31e-10 | 1 |
tonsil | 7.50e-10 | 1 |
mucosa-associated lymphoid tissue | 7.50e-10 | 1 |
lymphoid tissue | 7.50e-10 | 1 |
tonsillar ring | 7.50e-10 | 1 |
surface | 9.70e-10 | 1 |
lower lobe of right lung | 1.36e-09 | 1 |
right lung lobe | 1.36e-09 | 1 |
lower lobe of lung | 1.36e-09 | 1 |
lobe of lung | 1.36e-09 | 1 |
right lung | 1.36e-09 | 1 |
immune system | 5.34e-09 | 93 |
colon | 5.99e-09 | 9 |
hemolymphoid system | 1.64e-07 | 108 |
large intestine | 2.09e-07 | 11 |
small intestine | 2.16e-07 | 4 |
hematopoietic system | 6.50e-07 | 98 |
blood island | 6.50e-07 | 98 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.