FFCP PHASE1:Hg19::chr7:94056523..94056567,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.55e-43!180;CL:0000057!7.13e-26!75;CL:0000680!1.33e-18!57;CL:0000056!1.33e-18!57;CL:0000355!1.33e-18!57;CL:0000187!7.93e-18!54;CL:0000183!9.23e-18!59;CL:0000192!6.98e-15!42;CL:0000514!6.98e-15!42;CL:0000393!8.84e-15!60;CL:0000211!8.84e-15!60;CL:0000048!9.66e-12!430;CL:0000723!7.79e-11!436;CL:0000359!1.67e-10!32;CL:0000034!3.41e-10!444;CL:0002620!2.69e-09!23;CL:0000499!8.45e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.55e-43!180;CL:0000057!7.13e-26!75;CL:0000680!1.33e-18!57;CL:0000056!1.33e-18!57;CL:0000355!1.33e-18!57;CL:0000187!7.93e-18!54;CL:0000183!9.23e-18!59;CL:0000192!6.98e-15!42;CL:0000514!6.98e-15!42;CL:0000393!8.84e-15!60;CL:0000211!8.84e-15!60;CL:0000048!9.66e-12!430;CL:0000723!7.79e-11!436;CL:0000359!1.67e-10!32;CL:0000034!3.41e-10!444;CL:0002620!2.69e-09!23;CL:0000499!8.45e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000192;7.05e-12;43!CL:0000359;4.99e-11;32!CL:0000187;1.05e-09;55!CL:0000057;2.24e-09;73!CL:0000499;1.82e-08;28!CL:0000134;3.73e-08;55!CL:0002320;4.57e-08;188!CL:0000393;7.95e-08;61!CL:0000211;7.95e-08;61!CL:0002620;1.02e-07;23!CL:0000723;1.29e-07;61!CL:0000327;2.69e-07;15!CL:0002494;3.78e-07;16!CL:0002334;5.70e-07;12!CL:0000048;5.79e-07;58 | |ontology_enrichment_celltype_v019=CL:0000192;7.05e-12;43!CL:0000359;4.99e-11;32!CL:0000187;1.05e-09;55!CL:0000057;2.24e-09;73!CL:0000499;1.82e-08;28!CL:0000134;3.73e-08;55!CL:0002320;4.57e-08;188!CL:0000393;7.95e-08;61!CL:0000211;7.95e-08;61!CL:0002620;1.02e-07;23!CL:0000723;1.29e-07;61!CL:0000327;2.69e-07;15!CL:0002494;3.78e-07;16!CL:0002334;5.70e-07;12!CL:0000048;5.79e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.14e-25,76;CL:0000048,7.66e-19,427;CL:0000723,6.50e-18,433;CL:0000680,6.55e-18,58;CL:0000056,6.55e-18,58;CL:0000355,6.55e-18,58;CL:0000187,1.24e-17,55;CL:0000192,7.88e-17,43;CL:0000514,7.88e-17,43;CL:0000034,1.01e-16,441;CL:0000393,1.53e-14,61;CL:0000211,1.53e-14,61;CL:0000359,1.37e-11,32;CL:0002320,1.28e-08,361;CL:0000499,1.73e-08,28;CL:0000134,6.83e-08,354;CL:0002620,1.03e-07,23;CL:0000327,2.55e-07,15;CL:0002334,4.26e-07,12;CL:0002494,4.73e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;7.05e-12;43!CL:0000355;2.75e-09;58 | |ontology_enrichment_development_v019=CL:0000514;7.05e-12;43!CL:0000355;2.75e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.65e-22!83;UBERON:0002329!1.65e-22!83;UBERON:0003077!1.65e-22!83;UBERON:0003059!1.65e-22!83;UBERON:0007282!1.65e-22!83;UBERON:0009618!1.65e-22!83;UBERON:0007285!1.65e-22!83;UBERON:0004290!6.01e-20!70;UBERON:0001134!1.99e-19!61;UBERON:0002036!1.99e-19!61;UBERON:0003082!1.99e-19!61;UBERON:0002385!3.84e-18!63;UBERON:0001015!3.84e-18!63;UBERON:0000383!3.84e-18!63;UBERON:0000486!9.10e-16!82;UBERON:0005256!1.10e-12!143;UBERON:0004872!1.05e-09!84;UBERON:0002100!1.51e-09!216;UBERON:0000475!3.82e-09!365;UBERON:0002199!4.63e-08!45;UBERON:0002416!4.63e-08!45;UBERON:0003102!2.57e-07!95;UBERON:0000948!4.41e-07!24;UBERON:0005498!4.41e-07!24;UBERON:0004140!4.41e-07!24;UBERON:0009881!4.41e-07!24;UBERON:0004141!4.41e-07!24;UBERON:0003084!4.41e-07!24;UBERON:0007005!4.41e-07!24;UBERON:0004139!4.41e-07!24;UBERON:0004291!4.41e-07!24;UBERON:0001637!7.39e-07!42;UBERON:0003509!7.39e-07!42;UBERON:0004572!7.39e-07!42;UBERON:0000490!9.63e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!1.65e-22!83;UBERON:0002329!1.65e-22!83;UBERON:0003077!1.65e-22!83;UBERON:0003059!1.65e-22!83;UBERON:0007282!1.65e-22!83;UBERON:0009618!1.65e-22!83;UBERON:0007285!1.65e-22!83;UBERON:0004290!6.01e-20!70;UBERON:0001134!1.99e-19!61;UBERON:0002036!1.99e-19!61;UBERON:0003082!1.99e-19!61;UBERON:0002385!3.84e-18!63;UBERON:0001015!3.84e-18!63;UBERON:0000383!3.84e-18!63;UBERON:0000486!9.10e-16!82;UBERON:0005256!1.10e-12!143;UBERON:0004872!1.05e-09!84;UBERON:0002100!1.51e-09!216;UBERON:0000475!3.82e-09!365;UBERON:0002199!4.63e-08!45;UBERON:0002416!4.63e-08!45;UBERON:0003102!2.57e-07!95;UBERON:0000948!4.41e-07!24;UBERON:0005498!4.41e-07!24;UBERON:0004140!4.41e-07!24;UBERON:0009881!4.41e-07!24;UBERON:0004141!4.41e-07!24;UBERON:0003084!4.41e-07!24;UBERON:0007005!4.41e-07!24;UBERON:0004139!4.41e-07!24;UBERON:0004291!4.41e-07!24;UBERON:0001637!7.39e-07!42;UBERON:0003509!7.39e-07!42;UBERON:0004572!7.39e-07!42;UBERON:0000490!9.63e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.45e-08;198!UBERON:0004457;1.41e-07;9!UBERON:0000042;1.41e-07;9!UBERON:0003688;3.91e-07;6!UBERON:0002358;3.91e-07;6!UBERON:0003684;3.91e-07;6!UBERON:0001178;3.91e-07;6!UBERON:0001013;4.22e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0002384;2.45e-08;198!UBERON:0004457;1.41e-07;9!UBERON:0000042;1.41e-07;9!UBERON:0003688;3.91e-07;6!UBERON:0002358;3.91e-07;6!UBERON:0003684;3.91e-07;6!UBERON:0001178;3.91e-07;6!UBERON:0001013;4.22e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.67e-18,62;UBERON:0002036,1.67e-18,62;UBERON:0003082,1.67e-18,62;UBERON:0002385,1.92e-17,64;UBERON:0001015,1.92e-17,64;UBERON:0000383,1.92e-17,64;UBERON:0007524,2.15e-17,73;UBERON:0002329,4.56e-17,71;UBERON:0003059,4.56e-17,71;UBERON:0007282,4.56e-17,71;UBERON:0004290,4.56e-17,71;UBERON:0009618,4.56e-17,71;UBERON:0003077,1.31e-16,72;UBERON:0007285,1.31e-16,72;UBERON:0000486,2.92e-14,83;UBERON:0007503,3.91e-14,78;UBERON:0005256,6.13e-12,122;UBERON:0003104,1.07e-10,160;UBERON:0009142,1.07e-10,160;UBERON:0004872,4.27e-09,83;UBERON:0002384,8.11e-09,371;UBERON:0002199,2.15e-08,46;UBERON:0002416,2.15e-08,46;UBERON:0001637,2.59e-08,42;UBERON:0003509,2.59e-08,42;UBERON:0004572,2.59e-08,42;UBERON:0000490,8.48e-08,148;UBERON:0000948,1.52e-07,24;UBERON:0005498,1.52e-07,24;UBERON:0004140,1.52e-07,24;UBERON:0009881,1.52e-07,24;UBERON:0004141,1.52e-07,24;UBERON:0003084,1.52e-07,24;UBERON:0007005,1.52e-07,24;UBERON:0004139,1.52e-07,24;UBERON:0004291,1.52e-07,24;UBERON:0004535,3.29e-07,109;UBERON:0001013,3.48e-07,14;UBERON:0004573,3.79e-07,33;UBERON:0004571,3.79e-07,33;UBERON:0003688,4.35e-07,6;UBERON:0002358,4.35e-07,6;UBERON:0003684,4.35e-07,6;UBERON:0001178,4.35e-07,6;UBERON:0002100,5.54e-07,199;UBERON:0003102,5.95e-07,99;UBERON:0000926,8.58e-07,315;UBERON:0004120,8.58e-07,315;UBERON:0006603,8.58e-07,315;UBERON:0002049,9.77e-07,78;UBERON:0007798,9.77e-07,78 | |||
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| ||
|short_description=p8@COL1A2 | |short_description=p8@COL1A2 | ||
}} | }} |
Revision as of 23:03, 20 November 2012
Short description: | p8@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -56bp_to_ENST00000464916_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.14e-25 | 76 |
multi fate stem cell | 7.66e-19 | 427 |
somatic stem cell | 6.50e-18 | 433 |
muscle precursor cell | 6.55e-18 | 58 |
myoblast | 6.55e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.55e-18 | 58 |
muscle cell | 1.24e-17 | 55 |
smooth muscle cell | 7.88e-17 | 43 |
smooth muscle myoblast | 7.88e-17 | 43 |
stem cell | 1.01e-16 | 441 |
electrically responsive cell | 1.53e-14 | 61 |
electrically active cell | 1.53e-14 | 61 |
vascular associated smooth muscle cell | 1.37e-11 | 32 |
connective tissue cell | 1.28e-08 | 361 |
stromal cell | 1.73e-08 | 28 |
mesenchymal cell | 6.83e-08 | 354 |
skin fibroblast | 1.03e-07 | 23 |
extracellular matrix secreting cell | 2.55e-07 | 15 |
preadipocyte | 4.26e-07 | 12 |
cardiocyte | 4.73e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.