FFCP PHASE1:Mm9::chr14:62217101..62217123,+: Difference between revisions
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|id=chr14:62217101..62217123,+ | |id=chr14:62217101..62217123,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.91e-08,11;CL:0000827,1.91e-08,11;CL:0000838,9.39e-08,12;CL:0000542,3.62e-07,13;CL:0000051,3.62e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.38e-13!29;UBERON:0006562!6.15e-12!24;UBERON:0001557!6.15e-12!24;UBERON:0001042!6.15e-12!24;UBERON:0008814!6.15e-12!24;UBERON:0009145!6.15e-12!24;UBERON:0002370!3.73e-11!23;UBERON:0000974!3.73e-11!23;UBERON:0004807!3.73e-11!23;UBERON:0005058!3.73e-11!23;UBERON:0003351!3.73e-11!23;UBERON:0009113!3.73e-11!23;UBERON:0003295!3.73e-11!23;UBERON:0009722!3.73e-11!23;UBERON:0005562!3.73e-11!23;UBERON:0007690!3.73e-11!23;UBERON:0003408!1.71e-10!24;UBERON:0005057!3.54e-10!51;UBERON:0002390!4.50e-10!45;UBERON:0003061!4.50e-10!45;UBERON:0000072!4.72e-10!27;UBERON:0002193!5.08e-09!48;UBERON:0002405!2.11e-08!70 | |ontology_enrichment_uberon=UBERON:0004177!7.38e-13!29;UBERON:0006562!6.15e-12!24;UBERON:0001557!6.15e-12!24;UBERON:0001042!6.15e-12!24;UBERON:0008814!6.15e-12!24;UBERON:0009145!6.15e-12!24;UBERON:0002370!3.73e-11!23;UBERON:0000974!3.73e-11!23;UBERON:0004807!3.73e-11!23;UBERON:0005058!3.73e-11!23;UBERON:0003351!3.73e-11!23;UBERON:0009113!3.73e-11!23;UBERON:0003295!3.73e-11!23;UBERON:0009722!3.73e-11!23;UBERON:0005562!3.73e-11!23;UBERON:0007690!3.73e-11!23;UBERON:0003408!1.71e-10!24;UBERON:0005057!3.54e-10!51;UBERON:0002390!4.50e-10!45;UBERON:0003061!4.50e-10!45;UBERON:0000072!4.72e-10!27;UBERON:0002193!5.08e-09!48;UBERON:0002405!2.11e-08!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.55e-15,23;UBERON:0000974,8.55e-15,23;UBERON:0004807,8.55e-15,23;UBERON:0005058,8.55e-15,23;UBERON:0003351,8.55e-15,23;UBERON:0009113,8.55e-15,23;UBERON:0003295,8.55e-15,23;UBERON:0009722,8.55e-15,23;UBERON:0005562,8.55e-15,23;UBERON:0007690,8.55e-15,23;UBERON:0006562,3.83e-14,24;UBERON:0003408,3.83e-14,24;UBERON:0001557,3.83e-14,24;UBERON:0001042,3.83e-14,24;UBERON:0008814,3.83e-14,24;UBERON:0009145,3.83e-14,24;UBERON:0000072,1.78e-12,27;UBERON:0004177,1.48e-11,29;UBERON:0005057,1.48e-11,29;UBERON:0000077,2.01e-09,35;UBERON:0007811,3.90e-09,36;UBERON:0000065,6.55e-08,41;UBERON:0001004,1.06e-07,42;UBERON:0000153,1.69e-07,43;UBERON:0003929,3.97e-07,55;UBERON:0002390,4.00e-07,45;UBERON:0003061,4.00e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,1.87251621057595,0,0,0,0,0,0.202475267389826,0,0,0,0,0.765389611359628,8.24114894967348,7.83599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33476084572875,0.393117990226406,0,0.405720242777006,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.376736914009382,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.496375471371293,1.55560950675238,0.129159823477731,0,0.117357238645754,0,0.209718688851422,2.17425708743405,2.01621004380506,0.632022241256357,3.85177909051312,2.36235201479103,4.28738715826724,2.14832034800978,1.98681354781265,0.961563596159751,2.36303243479324,1.71642964911851,0.914481679859998,0.806609481094724,0,0.288635524920988,0.584384510907845,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,1.87251621057595,0,0,0,0,0,0.202475267389826,0,0,0,0,0.765389611359628,8.24114894967348,7.83599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33476084572875,0.393117990226406,0,0.405720242777006,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.376736914009382,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.496375471371293,1.55560950675238,0.129159823477731,0,0.117357238645754,0,0.209718688851422,2.17425708743405,2.01621004380506,0.632022241256357,3.85177909051312,2.36235201479103,4.28738715826724,2.14832034800978,1.98681354781265,0.961563596159751,2.36303243479324,1.71642964911851,0.914481679859998,0.806609481094724,0,0.288635524920988,0.584384510907845,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p4@Trim13 | |short_description=p4@Trim13 | ||
}} | }} |
Revision as of 03:13, 14 November 2012
Short description: | p4@Trim13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trim13_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | 38bp_to_ENSMUST00000165015, NM_001164220, uc007ufy.2_5end |
EntrezGene: | Trim13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.91e-08 | 11 |
pro-T cell | 1.91e-08 | 11 |
lymphoid lineage restricted progenitor cell | 9.39e-08 | 12 |
lymphocyte | 3.62e-07 | 13 |
common lymphoid progenitor | 3.62e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.55e-15 | 23 |
neck | 8.55e-15 | 23 |
respiratory system epithelium | 8.55e-15 | 23 |
hemolymphoid system gland | 8.55e-15 | 23 |
pharyngeal epithelium | 8.55e-15 | 23 |
thymic region | 8.55e-15 | 23 |
pharyngeal gland | 8.55e-15 | 23 |
entire pharyngeal arch endoderm | 8.55e-15 | 23 |
thymus primordium | 8.55e-15 | 23 |
early pharyngeal endoderm | 8.55e-15 | 23 |
pharynx | 3.83e-14 | 24 |
gland of gut | 3.83e-14 | 24 |
upper respiratory tract | 3.83e-14 | 24 |
chordate pharynx | 3.83e-14 | 24 |
pharyngeal arch system | 3.83e-14 | 24 |
pharyngeal region of foregut | 3.83e-14 | 24 |
segment of respiratory tract | 1.78e-12 | 27 |
hemopoietic organ | 1.48e-11 | 29 |
immune organ | 1.48e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 2.01e-09 | 35 |
craniocervical region | 3.90e-09 | 36 |
respiratory tract | 6.55e-08 | 41 |
respiratory system | 1.06e-07 | 42 |
anterior region of body | 1.69e-07 | 43 |
gut epithelium | 3.97e-07 | 55 |
hematopoietic system | 4.00e-07 | 45 |
blood island | 4.00e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.