FFCP PHASE1:Mm9::chr7:50683034..50683049,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=233187|HGNC=|MCL_coexpression_id=339|UniProt=Q3ULB9|association_with_transcript=0bp_to_ENSMUST00000164977_5end|description=CAGE_peak_3_at_Lim2_5end|id=chr7:50683034..50683049,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!6.54e-10!14;UBERON:0003135!3.77e-09!15;UBERON:0003101!1.74e-08!16;UBERON:0000079!1.74e-08!16;UBERON:0000970!4.08e-08!9;UBERON:0000019!4.08e-08!9;UBERON:0000047!4.08e-08!9;UBERON:0004088!4.08e-08!9;UBERON:0002104!4.08e-08!9;UBERON:0001456!4.08e-08!9;UBERON:0003072!4.08e-08!9;UBERON:0003071!4.08e-08!9;UBERON:0004128!4.08e-08!9;UBERON:0004176!6.72e-08!17;UBERON:0009196!6.72e-08!17;UBERON:0009117!6.72e-08!17;UBERON:0000991!2.23e-07!18;UBERON:0005564!2.23e-07!18;UBERON:0000466!4.39e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.49e-17,14;UBERON:0003135,3.22e-16,15;UBERON:0003101,3.03e-15,16;UBERON:0000079,3.03e-15,16;UBERON:0004176,2.20e-14,17;UBERON:0009196,2.20e-14,17;UBERON:0009117,2.20e-14,17;UBERON:0000991,1.28e-13,18;UBERON:0005564,1.28e-13,18;UBERON:0003133,2.34e-10,24;UBERON:0002323,2.64e-10,37;UBERON:0004458,2.64e-10,37;UBERON:0003886,4.80e-10,38;UBERON:0002553,8.49e-10,39;UBERON:0005156,1.33e-09,26;UBERON:0000990,1.33e-09,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,1.76673214768315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0.229902104433473,0,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69531611304222,0.410082683163076,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,16.139448632556,10.4619457016962,12.3337971608268,4.92900402312167,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.661774257358546,0|short_description=p3@Lim2}} | ||
|EntrezGene=233187 | |||
|HGNC= | |||
|MCL_coexpression_id=339 | |||
|UniProt=Q3ULB9 | |||
|association_with_transcript=0bp_to_ENSMUST00000164977_5end | |||
|description=CAGE_peak_3_at_Lim2_5end | |||
|id=chr7:50683034..50683049,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.54e-10!14;UBERON:0003135!3.77e-09!15;UBERON:0003101!1.74e-08!16;UBERON:0000079!1.74e-08!16;UBERON:0000970!4.08e-08!9;UBERON:0000019!4.08e-08!9;UBERON:0000047!4.08e-08!9;UBERON:0004088!4.08e-08!9;UBERON:0002104!4.08e-08!9;UBERON:0001456!4.08e-08!9;UBERON:0003072!4.08e-08!9;UBERON:0003071!4.08e-08!9;UBERON:0004128!4.08e-08!9;UBERON:0004176!6.72e-08!17;UBERON:0009196!6.72e-08!17;UBERON:0009117!6.72e-08!17;UBERON:0000991!2.23e-07!18;UBERON:0005564!2.23e-07!18;UBERON:0000466!4.39e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.49e-17,14;UBERON:0003135,3.22e-16,15;UBERON:0003101,3.03e-15,16;UBERON:0000079,3.03e-15,16;UBERON:0004176,2.20e-14,17;UBERON:0009196,2.20e-14,17;UBERON:0009117,2.20e-14,17;UBERON:0000991,1.28e-13,18;UBERON:0005564,1.28e-13,18;UBERON:0003133,2.34e-10,24;UBERON:0002323,2.64e-10,37;UBERON:0004458,2.64e-10,37;UBERON:0003886,4.80e-10,38;UBERON:0002553,8.49e-10,39;UBERON:0005156,1.33e-09,26;UBERON:0000990,1.33e-09,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,1.76673214768315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0.229902104433473,0,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69531611304222,0.410082683163076,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,16.139448632556,10.4619457016962,12.3337971608268,4.92900402312167,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.661774257358546,0 | |||
|short_description=p3@Lim2 | |||
}} |
Revision as of 13:31, 14 September 2013
Short description: | p3@Lim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:339 |
Association with transcript: | 0bp_to_ENSMUST00000164977_5end |
EntrezGene: | Lim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.49e-17 | 14 |
male reproductive organ | 3.22e-16 | 15 |
male organism | 3.03e-15 | 16 |
male reproductive system | 3.03e-15 | 16 |
external genitalia | 2.20e-14 | 17 |
indifferent external genitalia | 2.20e-14 | 17 |
indifferent gonad | 2.20e-14 | 17 |
gonad | 1.28e-13 | 18 |
gonad primordium | 1.28e-13 | 18 |
reproductive organ | 2.34e-10 | 24 |
body cavity | 2.64e-10 | 37 |
body cavity or lining | 2.64e-10 | 37 |
body cavity precursor | 4.80e-10 | 38 |
anatomical cavity | 8.49e-10 | 39 |
reproductive structure | 1.33e-09 | 26 |
reproductive system | 1.33e-09 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.