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FFCP PHASE1:Mm9::chr13:104968878..104968952,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=81003|HGNC=|MCL_coexpression_id=813|UniProt=Q8BGX0,E0CY80|association_with_transcript=0bp_to_ENSMUST00000069187,ENSMUST00000160230,uc007rsx.1,uc011zeg.1_5end|description=CAGE_peak_1_at_Trim23_5end|id=chr13:104968878..104968952,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.21e-10!63;UBERON:0007811!3.40e-09!86;UBERON:0000153!4.25e-09!94;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0002346!5.59e-08!71;UBERON:0003075!5.59e-08!71;UBERON:0007284!5.59e-08!71;UBERON:0000475!7.77e-08!200;UBERON:0003056!1.12e-07!49;UBERON:0000955!1.31e-07!50;UBERON:0006238!1.31e-07!50;UBERON:0002616!3.36e-07!49;UBERON:0001049!8.58e-07!52;UBERON:0005068!8.58e-07!52;UBERON:0006241!8.58e-07!52;UBERON:0007135!8.58e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.69e-09,73;UBERON:0002346,6.21e-09,64;UBERON:0003075,6.21e-09,64;UBERON:0007284,6.21e-09,64;UBERON:0010314,2.20e-08,92;UBERON:0002021,5.24e-08,10;UBERON:0000411,5.24e-08,10;UBERON:0001950,5.24e-08,10;UBERON:0003056,1.12e-07,49;UBERON:0000073,1.30e-07,54;UBERON:0004121,6.15e-07,95;UBERON:0000924,6.15e-07,95;UBERON:0006601,6.15e-07,95;UBERON:0001049,8.58e-07,52;UBERON:0005068,8.58e-07,52;UBERON:0006241,8.58e-07,52;UBERON:0007135,8.58e-07,52|phase1_expression=32.9906625035876,8.72438519098403,8.64498554840118,6.95667686005709,9.5170188689806,9.73699777088961,9.34450562382103,28.7945011274715,11.403886494285,10.5329036844897,13.0125655851384,13.0826340752352,19.5168832121575,22.7293046289393,17.9879271380458,28.7514879693553,43.3728364439451,18.4545366734569,23.8579114473985,17.8243653755173,23.0467316309399,18.6666988257664,23.2467812333652,7.83962871687693,8.71755268055246,6.31655160526522,6.8921919385452,10.5580904016086,9.12112413390595,7.05684363327806,5.76499327703792,9.52546010189447,2.46025915033828,0,11.8429164098023,6.64938581433969,9.18762103180661,15.9042019680025,15.626706890476,16.7527598071615,17.0587131528994,20.4913645487534,14.0798002379035,33.4885535815036,33.4543873024398,29.367480345869,4.69434806608824,3.70642765846759,3.07560655828261,6.02732687130279,2.51975558925653,4.31257693094915,14.7648693330808,16.6833292662609,14.7881271622684,13.3774906738692,17.1920063963254,10.8291139378263,9.71119012126069,11.1088105647127,7.60597684207415,7.45457970552091,4.4464739805557,3.5995988691256,1.97773272513395,3.5524005747305,3.29560121570245,1.53687322128622,18.8715094401429,12.0155285115205,13.4607975264884,16.5677570954206,14.1355866209033,13.5964787128599,10.543001812006,11.0306254393203,39.6417171597799,43.7967569632194,44.2386815777981,11.0784481693363,11.5274430939036,13.5437476344758,20.1011759280994,38.8306200921859,38.5051584397561,31.2306300602088,30.1827963294098,23.8591290656385,12.4190957066422,14.1318817399689,23.4790235848359,12.0459342777394,7.47968467078526,12.4131734076698,14.2950811838487,13.8888335000174,19.5217743983135,13.4639954836666,12.7295142255406,10.2468476607999,27.4644668564527,30.7983545794363,15.2883143823987,35.5533351576666,7.79367747640371,7.85415582972806,8.59391556525132,16.3282947998256,24.081223179187,19.8912466346865,15.4401940821861,9.13396434936424,13.1450833435953,17.9359942257621,25.1639833270408,18.0959891514733,27.4386414185155,18.5087176857487,15.0383793831479,21.1914573431106,19.8757366614354,18.9101348722737,3.72783522436244,45.0882427397783,53.8278036510579,7.40825460104915,14.0183695671927,7.7987355029143,16.2649890653523,44.1882386244227,51.6975681185048,47.1203820423242,55.7976067817207,61.88314067394,49.0379785160562,52.0794454447502,27.5984676034357,23.1396965334773,24.0086620511991,16.8353484709179,21.2096322029207,23.4500146522142,20.7071449276152,26.6747527569216,36.0593445502038,31.7722026306427,31.6711829011883,38.2880988693743,9.7005596819779,19.0997140969497,19.7065259063623,16.6588756644957,15.5706459566335,20.89512999133,23.0475992776897,20.6995637491233,7.72434506044558,5.66165395652373,8.52490498186778,13.0489236697366,19.465662978431,18.1862682075625,13.2577051927718,15.9379027715397,15.8895126274,20.6955210827863,14.7550370769791,29.7751623036282,18.7598228901368,21.3417703302824,25.2123997687611,27.4855976359625,22.8332119902693,26.707077333314,57.6194459065709,46.307075570678,7.59963200862735,6.08236303326152,20.049095550312,17.8822237332538,16.62390251055,12.1010114774006,10.8965241483986,11.6037631928661,6.16887780007865,8.23494773620054,12.3154252312132,16.5133871794155,14.0374142725766,9.88701349519644,9.07779809473716,11.1519113022446,5.50036912763937,17.5942709418982,21.4144697778853,16.9030602111611,20.752916126936,25.6697100798566,20.8048207138806,19.3369293853279,21.0378295307442,26.0368015874999,13.6368208460088,11.1786220829783,19.4593405162071,15.2906236421701,18.8659912891308,21.7059443777175,19.8608164389507,16.686375972147,26.2659067375557,12.0807021802756,27.3159592401974,17.4906245404197,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|EntrezGene=81003
|HGNC=
|MCL_coexpression_id=813
|UniProt=Q8BGX0,E0CY80
|association_with_transcript=0bp_to_ENSMUST00000069187,ENSMUST00000160230,uc007rsx.1,uc011zeg.1_5end
|description=CAGE_peak_1_at_Trim23_5end
|id=chr13:104968878..104968952,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.21e-10!63;UBERON:0007811!3.40e-09!86;UBERON:0000153!4.25e-09!94;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0002346!5.59e-08!71;UBERON:0003075!5.59e-08!71;UBERON:0007284!5.59e-08!71;UBERON:0000475!7.77e-08!200;UBERON:0003056!1.12e-07!49;UBERON:0000955!1.31e-07!50;UBERON:0006238!1.31e-07!50;UBERON:0002616!3.36e-07!49;UBERON:0001049!8.58e-07!52;UBERON:0005068!8.58e-07!52;UBERON:0006241!8.58e-07!52;UBERON:0007135!8.58e-07!52
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|short_description=p1@Trim23
}}

Revision as of 23:46, 12 September 2013

Short description:p1@Trim23
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim23_5end
Coexpression cluster:MCL_coexpression_mm9:813
Association with transcript: 0bp_to_ENSMUST00000069187, ENSMUST00000160230, uc007rsx.1, uc011zeg.1_5end
EntrezGene:Trim23
Link to Zenbu:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.