FFCP PHASE1:Mm9::chr11:76308397..76308417,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109934|HGNC=|UniProt=|association_with_transcript=68bp_to_ENSMUST00000137261_5end|description=CAGE_peak_10_at_Abr_5end|id=chr11:76308397..76308417,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!2.62e-09!24;UBERON:0001557!2.62e-09!24;UBERON:0001042!2.62e-09!24;UBERON:0008814!2.62e-09!24;UBERON:0009145!2.62e-09!24;UBERON:0002370!3.57e-09!23;UBERON:0000974!3.57e-09!23;UBERON:0004807!3.57e-09!23;UBERON:0005058!3.57e-09!23;UBERON:0003351!3.57e-09!23;UBERON:0009113!3.57e-09!23;UBERON:0003295!3.57e-09!23;UBERON:0009722!3.57e-09!23;UBERON:0005562!3.57e-09!23;UBERON:0007690!3.57e-09!23;UBERON:0000065!4.54e-09!41;UBERON:0001004!2.34e-08!42;UBERON:0000072!3.14e-08!27;UBERON:0003408!3.61e-08!24;UBERON:0000063!5.14e-07!35;UBERON:0004177!9.25e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.52e-15,23;UBERON:0000974,9.52e-15,23;UBERON:0004807,9.52e-15,23;UBERON:0005058,9.52e-15,23;UBERON:0003351,9.52e-15,23;UBERON:0009113,9.52e-15,23;UBERON:0003295,9.52e-15,23;UBERON:0009722,9.52e-15,23;UBERON:0005562,9.52e-15,23;UBERON:0007690,9.52e-15,23;UBERON:0006562,7.37e-14,24;UBERON:0003408,7.37e-14,24;UBERON:0001557,7.37e-14,24;UBERON:0001042,7.37e-14,24;UBERON:0008814,7.37e-14,24;UBERON:0009145,7.37e-14,24;UBERON:0000072,1.33e-11,27;UBERON:0000065,1.17e-10,41;UBERON:0000077,2.12e-10,35;UBERON:0004177,2.26e-10,29;UBERON:0005057,2.26e-10,29;UBERON:0001004,3.21e-10,42;UBERON:0002193,2.52e-08,48;UBERON:0002405,2.52e-08,48;UBERON:0007811,4.99e-08,36;UBERON:0004119,1.39e-07,118;UBERON:0000925,1.39e-07,118;UBERON:0006595,1.39e-07,118;UBERON:0001007,1.85e-07,116;UBERON:0001555,1.85e-07,116;UBERON:0007026,1.85e-07,116;UBERON:0005911,3.23e-07,69;UBERON:0000153,4.63e-07,43|phase1_expression=0,2.79180326111489,4.09499315450582,1.81478526784098,3.50627010962443,0.839396359559449,1.16806320297763,2.7115897922731,0.703943610758334,1.17032263160997,0.513653904676515,0.239316476986009,2.9104124088305,4.80812213304486,0.333109761815663,0,0,1.10411757875383,1.50825876966313,0,0.680346321208558,2.78014663362479,1.82839852397255,2.23989391910769,2.06468352960453,2.29692785646008,2.15380998079537,1.07735616342945,1.33016393619462,1.26015064879965,0.443461021310609,0,0,0,0.288851619751275,0,0.204169356262369,2.51118978442145,0.7813353445238,1.0470474879476,2.35292595212406,2.73218193983378,1.94204141212461,0.251793635951155,0.304130793658544,0.550640256485045,2.34717403304412,0.218025156380447,0,0,0.419959264876088,0,0.335565212115473,1.45072428402269,4.03312558970957,0.514518872071894,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.414758449233911,0.405017814995072,0.420649922702764,0.571301968807607,0.883474163806454,0,0.479227355091182,0.919218786610021,1.10115880999389,0.638436690425939,0.46081959976873,0.659431438650969,0.823388792421687,0.52091337055676,0.837548997004143,1.68828783009504,1.68078072554491,0,0.569486723196412,0.745597783301202,0.454357159999104,0.302286240427142,1.15945795480671,0,0,0,0,0,0.421333260395256,2.55645483867087,1.29893002301434,2.47337702157238,0,1.28326477414318,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.34255163915718,1.29468941823586,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.150722640552623,0.705532242814229,0.251333182659351,0,0.144599356919912,0,0.970601099684455,1.32504911076236,0.484875253135222,0,0.292780797011547,0.209446706813455,0.766371165625774,0.958520996047362,0.599902730993408,0.381210681219194,0.898743836428936,0,1.25654352112864,0.347648640384553,0.255715457330331,0.83115217823824,0,0.305518091550949,0.497627882440372,0,1.26265113531884,0,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.655912071918102,0.258703370739016,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,1.0447564995665,1.23469281844766,0.796137067273973,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.720248245844059,0,0,0.308534225774757,0,0.536546802799238,0.583826711835847,0.16455984991348,0.492502392237286,0.648550476366846,1.46199987425332,0.658650345873152,0.805238512562231,0,0.514523061896422,1.32167513193519,0.528901133327089,0.426576501070468,0.232236671860439,0.644337306610467,0.605050573870028,1.55664630691409,0.760902504450237,1.42358718463353,1.64698954724011,0.754005626400808,0.795825888164603,1.36474860983384,3.59527763461689,0,0.796565093017469,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.252946148497029,0.590440591918409,0.31399745568275,0.370191491765402,0,0.500535317148282,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0,1.47802552133284,0.37898282354097,0.488894929326078,0.169745085775188,0.2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| ||
|EntrezGene=109934 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=68bp_to_ENSMUST00000137261_5end | |||
|description=CAGE_peak_10_at_Abr_5end | |||
|id=chr11:76308397..76308417,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!2.62e-09!24;UBERON:0001557!2.62e-09!24;UBERON:0001042!2.62e-09!24;UBERON:0008814!2.62e-09!24;UBERON:0009145!2.62e-09!24;UBERON:0002370!3.57e-09!23;UBERON:0000974!3.57e-09!23;UBERON:0004807!3.57e-09!23;UBERON:0005058!3.57e-09!23;UBERON:0003351!3.57e-09!23;UBERON:0009113!3.57e-09!23;UBERON:0003295!3.57e-09!23;UBERON:0009722!3.57e-09!23;UBERON:0005562!3.57e-09!23;UBERON:0007690!3.57e-09!23;UBERON:0000065!4.54e-09!41;UBERON:0001004!2.34e-08!42;UBERON:0000072!3.14e-08!27;UBERON:0003408!3.61e-08!24;UBERON:0000063!5.14e-07!35;UBERON:0004177!9.25e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.52e-15,23;UBERON:0000974,9.52e-15,23;UBERON:0004807,9.52e-15,23;UBERON:0005058,9.52e-15,23;UBERON:0003351,9.52e-15,23;UBERON:0009113,9.52e-15,23;UBERON:0003295,9.52e-15,23;UBERON:0009722,9.52e-15,23;UBERON:0005562,9.52e-15,23;UBERON:0007690,9.52e-15,23;UBERON:0006562,7.37e-14,24;UBERON:0003408,7.37e-14,24;UBERON:0001557,7.37e-14,24;UBERON:0001042,7.37e-14,24;UBERON:0008814,7.37e-14,24;UBERON:0009145,7.37e-14,24;UBERON:0000072,1.33e-11,27;UBERON:0000065,1.17e-10,41;UBERON:0000077,2.12e-10,35;UBERON:0004177,2.26e-10,29;UBERON:0005057,2.26e-10,29;UBERON:0001004,3.21e-10,42;UBERON:0002193,2.52e-08,48;UBERON:0002405,2.52e-08,48;UBERON:0007811,4.99e-08,36;UBERON:0004119,1.39e-07,118;UBERON:0000925,1.39e-07,118;UBERON:0006595,1.39e-07,118;UBERON:0001007,1.85e-07,116;UBERON:0001555,1.85e-07,116;UBERON:0007026,1.85e-07,116;UBERON:0005911,3.23e-07,69;UBERON:0000153,4.63e-07,43 | |||
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| |||
|short_description=p10@Abr | |||
}} |
Revision as of 20:57, 12 September 2013
Short description: | p10@Abr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Abr_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENSMUST00000137261_5end |
EntrezGene: | Abr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 9.52e-15 | 23 |
neck | 9.52e-15 | 23 |
respiratory system epithelium | 9.52e-15 | 23 |
hemolymphoid system gland | 9.52e-15 | 23 |
pharyngeal epithelium | 9.52e-15 | 23 |
thymic region | 9.52e-15 | 23 |
pharyngeal gland | 9.52e-15 | 23 |
entire pharyngeal arch endoderm | 9.52e-15 | 23 |
thymus primordium | 9.52e-15 | 23 |
early pharyngeal endoderm | 9.52e-15 | 23 |
pharynx | 7.37e-14 | 24 |
gland of gut | 7.37e-14 | 24 |
upper respiratory tract | 7.37e-14 | 24 |
chordate pharynx | 7.37e-14 | 24 |
pharyngeal arch system | 7.37e-14 | 24 |
pharyngeal region of foregut | 7.37e-14 | 24 |
segment of respiratory tract | 1.33e-11 | 27 |
respiratory tract | 1.17e-10 | 41 |
mixed endoderm/mesoderm-derived structure | 2.12e-10 | 35 |
hemopoietic organ | 2.26e-10 | 29 |
immune organ | 2.26e-10 | 29 |
respiratory system | 3.21e-10 | 42 |
hemolymphoid system | 2.52e-08 | 48 |
immune system | 2.52e-08 | 48 |
craniocervical region | 4.99e-08 | 36 |
endoderm-derived structure | 1.39e-07 | 118 |
endoderm | 1.39e-07 | 118 |
presumptive endoderm | 1.39e-07 | 118 |
digestive system | 1.85e-07 | 116 |
digestive tract | 1.85e-07 | 116 |
primitive gut | 1.85e-07 | 116 |
endo-epithelium | 3.23e-07 | 69 |
anterior region of body | 4.63e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.