FFCP PHASE1:Mm9::chrX:130516246..130516258,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27359|HGNC=|MCL_coexpression_id=3739|UniProt=Q9R0Q1,Q549X6|association_with_transcript=63bp_to_ENSMUST00000113297,NM_013757,uc009ufe.1,uc009uff.1,uc009ufg.1,uc009ufh.1_5end|description=CAGE_peak_3_at_Sytl4_5end|id=chrX:130516246..130516258,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003886!7.25e-19!38;UBERON:0002553!4.04e-18!39;UBERON:0002323!9.33e-18!37;UBERON:0004458!9.33e-18!37;UBERON:0000991!6.68e-13!18;UBERON:0005564!6.68e-13!18;UBERON:0003135!7.47e-13!15;UBERON:0000464!1.08e-12!57;UBERON:0004176!3.88e-12!17;UBERON:0009196!3.88e-12!17;UBERON:0009117!3.88e-12!17;UBERON:0003101!9.25e-12!16;UBERON:0000079!9.25e-12!16;UBERON:0000473!1.13e-11!14;UBERON:0003133!5.70e-10!24;UBERON:0001045!6.84e-10!13;UBERON:0005156!7.76e-10!26;UBERON:0000990!7.76e-10!26;UBERON:0001264!6.59e-09!12;UBERON:0003922!6.59e-09!12;UBERON:0002114!6.59e-09!12;UBERON:0003923!6.59e-09!12;UBERON:0003924!6.59e-09!12;UBERON:0003921!6.59e-09!12;UBERON:0002108!1.45e-08!16;UBERON:0000466!3.82e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0003886,7.54e-19,38;UBERON:0002553,2.76e-18,39;UBERON:0002323,1.04e-16,37;UBERON:0004458,1.04e-16,37;UBERON:0001264,1.94e-16,12;UBERON:0002369,1.48e-12,7;UBERON:0006858,1.48e-12,7;UBERON:0000949,7.11e-12,72;UBERON:0003064,1.27e-11,14;UBERON:0000007,7.58e-11,8;UBERON:0003296,7.58e-11,8;UBERON:0010133,7.58e-11,8;UBERON:0002075,5.90e-10,19;UBERON:0003135,1.17e-09,15;UBERON:0003101,5.31e-09,16;UBERON:0000079,5.31e-09,16;UBERON:0001894,1.29e-08,10;UBERON:0006222,1.29e-08,10;UBERON:0004176,2.60e-08,17;UBERON:0009196,2.60e-08,17;UBERON:0009117,2.60e-08,17;UBERON:0000991,8.36e-08,18;UBERON:0005564,8.36e-08,18;UBERON:0000473,1.63e-07,14;UBERON:0003133,1.64e-07,24;UBERON:0005156,7.57e-07,26;UBERON:0000990,7.57e-07,26;UBERON:0005177,9.26e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,4.51061849591953,3.95805121805784,3.22861696158482,3.01445281105245,3.05730638552832,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,0.305518091550949,2.48813941220186,12.6361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.342745537829186,0,0,0.581857461502877,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12268187458191,0,0.162886959353576,0.164970122972535,1.32745138339963,0.485561272309963,0.302323556964751,1.88605079755898,3.2483208216885,3.99665692327106,2.32585463851399,1.45413491791002,1.06949213515416,0,2.10837217149998,0,5.44703369206061,0,0,0.428674070063185,5.32020700926821,3.21063871683727,1.64549020602121,2.74018454203139,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0,1.12738587736838,0.897099276263873,0.496375471371293,0.194451188344048,0.516639293910924,1.18269287843545,1.17357238645754,1.3020438484395,1.57289016638566,0.966336483304024,0.864090018773596,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p3@Sytl4}} | ||
|EntrezGene=27359 | |||
|HGNC= | |||
|MCL_coexpression_id=3739 | |||
|UniProt=Q9R0Q1,Q549X6 | |||
|association_with_transcript=63bp_to_ENSMUST00000113297,NM_013757,uc009ufe.1,uc009uff.1,uc009ufg.1,uc009ufh.1_5end | |||
|description=CAGE_peak_3_at_Sytl4_5end | |||
|id=chrX:130516246..130516258,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003886!7.25e-19!38;UBERON:0002553!4.04e-18!39;UBERON:0002323!9.33e-18!37;UBERON:0004458!9.33e-18!37;UBERON:0000991!6.68e-13!18;UBERON:0005564!6.68e-13!18;UBERON:0003135!7.47e-13!15;UBERON:0000464!1.08e-12!57;UBERON:0004176!3.88e-12!17;UBERON:0009196!3.88e-12!17;UBERON:0009117!3.88e-12!17;UBERON:0003101!9.25e-12!16;UBERON:0000079!9.25e-12!16;UBERON:0000473!1.13e-11!14;UBERON:0003133!5.70e-10!24;UBERON:0001045!6.84e-10!13;UBERON:0005156!7.76e-10!26;UBERON:0000990!7.76e-10!26;UBERON:0001264!6.59e-09!12;UBERON:0003922!6.59e-09!12;UBERON:0002114!6.59e-09!12;UBERON:0003923!6.59e-09!12;UBERON:0003924!6.59e-09!12;UBERON:0003921!6.59e-09!12;UBERON:0002108!1.45e-08!16;UBERON:0000466!3.82e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,7.54e-19,38;UBERON:0002553,2.76e-18,39;UBERON:0002323,1.04e-16,37;UBERON:0004458,1.04e-16,37;UBERON:0001264,1.94e-16,12;UBERON:0002369,1.48e-12,7;UBERON:0006858,1.48e-12,7;UBERON:0000949,7.11e-12,72;UBERON:0003064,1.27e-11,14;UBERON:0000007,7.58e-11,8;UBERON:0003296,7.58e-11,8;UBERON:0010133,7.58e-11,8;UBERON:0002075,5.90e-10,19;UBERON:0003135,1.17e-09,15;UBERON:0003101,5.31e-09,16;UBERON:0000079,5.31e-09,16;UBERON:0001894,1.29e-08,10;UBERON:0006222,1.29e-08,10;UBERON:0004176,2.60e-08,17;UBERON:0009196,2.60e-08,17;UBERON:0009117,2.60e-08,17;UBERON:0000991,8.36e-08,18;UBERON:0005564,8.36e-08,18;UBERON:0000473,1.63e-07,14;UBERON:0003133,1.64e-07,24;UBERON:0005156,7.57e-07,26;UBERON:0000990,7.57e-07,26;UBERON:0005177,9.26e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,4.51061849591953,3.95805121805784,3.22861696158482,3.01445281105245,3.05730638552832,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,0.305518091550949,2.48813941220186,12.6361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.342745537829186,0,0,0.581857461502877,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12268187458191,0,0.162886959353576,0.164970122972535,1.32745138339963,0.485561272309963,0.302323556964751,1.88605079755898,3.2483208216885,3.99665692327106,2.32585463851399,1.45413491791002,1.06949213515416,0,2.10837217149998,0,5.44703369206061,0,0,0.428674070063185,5.32020700926821,3.21063871683727,1.64549020602121,2.74018454203139,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0,1.12738587736838,0.897099276263873,0.496375471371293,0.194451188344048,0.516639293910924,1.18269287843545,1.17357238645754,1.3020438484395,1.57289016638566,0.966336483304024,0.864090018773596,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p3@Sytl4 | |||
}} |
Revision as of 19:17, 14 September 2013
Short description: | p3@Sytl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sytl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3739 |
Association with transcript: | 63bp_to_ENSMUST00000113297, NM_013757, uc009ufe.1, uc009uff.1, uc009ufg.1, uc009ufh.1_5end |
EntrezGene: | Sytl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 7.54e-19 | 38 |
anatomical cavity | 2.76e-18 | 39 |
body cavity | 1.04e-16 | 37 |
body cavity or lining | 1.04e-16 | 37 |
pancreas | 1.94e-16 | 12 |
adrenal gland | 1.48e-12 | 7 |
adrenal/interrenal gland | 1.48e-12 | 7 |
endocrine system | 7.11e-12 | 72 |
intermediate mesoderm | 1.27e-11 | 14 |
pituitary gland | 7.58e-11 | 8 |
gland of diencephalon | 7.58e-11 | 8 |
neuroendocrine gland | 7.58e-11 | 8 |
viscus | 5.90e-10 | 19 |
male reproductive organ | 1.17e-09 | 15 |
male organism | 5.31e-09 | 16 |
male reproductive system | 5.31e-09 | 16 |
diencephalon | 1.29e-08 | 10 |
future diencephalon | 1.29e-08 | 10 |
external genitalia | 2.60e-08 | 17 |
indifferent external genitalia | 2.60e-08 | 17 |
indifferent gonad | 2.60e-08 | 17 |
gonad | 8.36e-08 | 18 |
gonad primordium | 8.36e-08 | 18 |
testis | 1.63e-07 | 14 |
reproductive organ | 1.64e-07 | 24 |
reproductive structure | 7.57e-07 | 26 |
reproductive system | 7.57e-07 | 26 |
trunk region element | 9.26e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.