FFCP PHASE1:Mm9::chr4:132909362..132909389,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230796|HGNC=|MCL_coexpression_id=0|UniProt=A2AE97|association_with_transcript=6bp_to_ENSMUST00000140976,uc008vcr.2_5end|description=CAGE_peak_11_at_Wdtc1_5end|id=chr4:132909362..132909389,-|ontology_enrichment_celltype=CL:0002563!2.13e-09!9;CL:0002251!2.13e-09!9;CL:0002076!1.29e-08!15;CL:0000239!5.04e-08!6;CL:0000677!5.04e-08!6;CL:0000212!5.04e-08!6;CL:0000584!5.04e-08!6;CL:0000066!4.55e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,3.53e-18,6;CL:0000677,3.53e-18,6;CL:0000584,3.53e-18,6;CL:0000075,1.72e-15,7;CL:0002563,6.71e-12,9;CL:0002251,6.71e-12,9;CL:0000473,1.46e-10,7;CL:0000066,1.60e-10,25;CL:0000682,3.56e-10,3;CL:0002076,4.53e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.61e-14!15;UBERON:0004923!7.29e-13!24;UBERON:0001242!2.40e-12!13;UBERON:0000060!2.40e-12!13;UBERON:0001262!2.40e-12!13;UBERON:0004786!2.40e-12!13;UBERON:0003350!2.13e-09!9;UBERON:0004808!2.13e-09!9;UBERON:0001277!2.13e-09!9;UBERON:0000160!2.88e-09!43;UBERON:0005409!4.85e-09!59;UBERON:0000485!3.19e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0004923,6.23e-16,24;UBERON:0000344,3.16e-15,15;UBERON:0003350,6.71e-12,9;UBERON:0004808,6.71e-12,9;UBERON:0001277,6.71e-12,9;UBERON:0001242,8.75e-11,13;UBERON:0001262,8.75e-11,13;UBERON:0004786,8.75e-11,13;UBERON:0000485,1.30e-09,11;UBERON:0005631,2.37e-09,3;UBERON:0000478,2.37e-09,3;UBERON:0000158,2.37e-09,3;UBERON:0002465,2.53e-09,3;UBERON:0001962,3.76e-07,2;UBERON:0001961,3.76e-07,2;UBERON:0001744,3.76e-07,2;UBERON:0001987,7.94e-07,2;UBERON:0003124,7.94e-07,2;UBERON:0004340,7.94e-07,2|phase1_expression=0,6.97950815278722,8.18998630901165,3.62957053568196,2.00358291978539,5.70789524500425,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2051948181284,0,0,3.83981814704176,3.67054849707472,4.01962374880514,5.1691439539089,6.24866574789078,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,1.25559489221072,0,0,2.94115744015507,1.36609096991689,1.45653105909346,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0.852151612890289,0.259786004602869,0,0,0,0,0,0.649473123033642,0.506719730950197,1.51657333504435,1.25602267690966,1.03575153458869,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,2.22475470960936,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,3.30418782983798,0.793351699990633,0,0,0.128867461322093,0,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0.898819408654221,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,2.54198485036584,0,0.32977250588296,0.161464426695906,0.361877549568935,0,0.492422699235184,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.809186078308924,0.826534557253359,0.523511883968059,0.259229946583586,0,31.5668045663147,0,0,0,0,0,0,0,0,0,21.314220463082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.665957860122194,0.986852422704233,2.51826924546118,0.19318959403219,0.375364950902364,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p11@Wdtc1}} | ||
|EntrezGene=230796 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=A2AE97 | |||
|association_with_transcript=6bp_to_ENSMUST00000140976,uc008vcr.2_5end | |||
|description=CAGE_peak_11_at_Wdtc1_5end | |||
|id=chr4:132909362..132909389,- | |||
|ontology_enrichment_celltype=CL:0002563!2.13e-09!9;CL:0002251!2.13e-09!9;CL:0002076!1.29e-08!15;CL:0000239!5.04e-08!6;CL:0000677!5.04e-08!6;CL:0000212!5.04e-08!6;CL:0000584!5.04e-08!6;CL:0000066!4.55e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.53e-18,6;CL:0000677,3.53e-18,6;CL:0000584,3.53e-18,6;CL:0000075,1.72e-15,7;CL:0002563,6.71e-12,9;CL:0002251,6.71e-12,9;CL:0000473,1.46e-10,7;CL:0000066,1.60e-10,25;CL:0000682,3.56e-10,3;CL:0002076,4.53e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.61e-14!15;UBERON:0004923!7.29e-13!24;UBERON:0001242!2.40e-12!13;UBERON:0000060!2.40e-12!13;UBERON:0001262!2.40e-12!13;UBERON:0004786!2.40e-12!13;UBERON:0003350!2.13e-09!9;UBERON:0004808!2.13e-09!9;UBERON:0001277!2.13e-09!9;UBERON:0000160!2.88e-09!43;UBERON:0005409!4.85e-09!59;UBERON:0000485!3.19e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,6.23e-16,24;UBERON:0000344,3.16e-15,15;UBERON:0003350,6.71e-12,9;UBERON:0004808,6.71e-12,9;UBERON:0001277,6.71e-12,9;UBERON:0001242,8.75e-11,13;UBERON:0001262,8.75e-11,13;UBERON:0004786,8.75e-11,13;UBERON:0000485,1.30e-09,11;UBERON:0005631,2.37e-09,3;UBERON:0000478,2.37e-09,3;UBERON:0000158,2.37e-09,3;UBERON:0002465,2.53e-09,3;UBERON:0001962,3.76e-07,2;UBERON:0001961,3.76e-07,2;UBERON:0001744,3.76e-07,2;UBERON:0001987,7.94e-07,2;UBERON:0003124,7.94e-07,2;UBERON:0004340,7.94e-07,2 | |||
|phase1_expression=0,6.97950815278722,8.18998630901165,3.62957053568196,2.00358291978539,5.70789524500425,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2051948181284,0,0,3.83981814704176,3.67054849707472,4.01962374880514,5.1691439539089,6.24866574789078,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,1.25559489221072,0,0,2.94115744015507,1.36609096991689,1.45653105909346,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0.852151612890289,0.259786004602869,0,0,0,0,0,0.649473123033642,0.506719730950197,1.51657333504435,1.25602267690966,1.03575153458869,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,2.22475470960936,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,3.30418782983798,0.793351699990633,0,0,0.128867461322093,0,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0.898819408654221,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,2.54198485036584,0,0.32977250588296,0.161464426695906,0.361877549568935,0,0.492422699235184,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.809186078308924,0.826534557253359,0.523511883968059,0.259229946583586,0,31.5668045663147,0,0,0,0,0,0,0,0,0,21.314220463082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.665957860122194,0.986852422704233,2.51826924546118,0.19318959403219,0.375364950902364,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p11@Wdtc1 | |||
}} |
Revision as of 04:00, 14 September 2013
Short description: | p11@Wdtc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Wdtc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 6bp_to_ENSMUST00000140976, uc008vcr.2_5end |
EntrezGene: | Wdtc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.53e-18 | 6 |
gut absorptive cell | 3.53e-18 | 6 |
enterocyte | 3.53e-18 | 6 |
columnar/cuboidal epithelial cell | 1.72e-15 | 7 |
intestinal epithelial cell | 6.71e-12 | 9 |
epithelial cell of alimentary canal | 6.71e-12 | 9 |
defensive cell | 1.46e-10 | 7 |
epithelial cell | 1.60e-10 | 25 |
M cell of gut | 3.56e-10 | 3 |
endo-epithelial cell | 4.53e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 6.23e-16 | 24 |
mucosa | 3.16e-15 | 15 |
epithelium of mucosa | 6.71e-12 | 9 |
gastrointestinal system epithelium | 6.71e-12 | 9 |
intestinal epithelium | 6.71e-12 | 9 |
intestinal mucosa | 8.75e-11 | 13 |
wall of intestine | 8.75e-11 | 13 |
gastrointestinal system mucosa | 8.75e-11 | 13 |
simple columnar epithelium | 1.30e-09 | 11 |
extraembryonic membrane | 2.37e-09 | 3 |
extraembryonic structure | 2.37e-09 | 3 |
membranous layer | 2.37e-09 | 3 |
lymphoid system | 2.53e-09 | 3 |
gut-associated lymphoid tissue | 3.76e-07 | 2 |
mucosa-associated lymphoid tissue | 3.76e-07 | 2 |
lymphoid tissue | 3.76e-07 | 2 |
placenta | 7.94e-07 | 2 |
chorion | 7.94e-07 | 2 |
allantois | 7.94e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.