FFCP PHASE1:Mm9::chr3:86816166..86816175,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=162|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:86816166..86816175,-|id=chr3:86816166..86816175,-|ontology_enrichment_celltype=CL:0000181!1.61e-12!5;CL:0000417!1.61e-12!5;CL:0000668!1.61e-12!5;CL:0000412!1.61e-12!5;CL:0000182!1.61e-12!5|ontology_enrichment_celltype_v019_2=CL:0000182,5.02e-29,5;CL:0000057,6.88e-10,1;CL:0000632,6.88e-10,1;CL:0000223,1.58e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!4.73e-13!25;UBERON:0002330!4.73e-13!25;UBERON:0005256!1.83e-12!47;UBERON:0002369!2.21e-12!7;UBERON:0006858!2.21e-12!7;UBERON:0002107!3.11e-12!22;UBERON:0007499!3.11e-12!22;UBERON:0006925!3.11e-12!22;UBERON:0009497!3.11e-12!22;UBERON:0000015!3.11e-12!22;UBERON:0002423!3.11e-12!22;UBERON:0006235!3.11e-12!22;UBERON:0008835!3.11e-12!22;UBERON:0003894!3.11e-12!22;UBERON:0004161!3.11e-12!22;UBERON:0008836!3.11e-12!22;UBERON:0005172!7.67e-12!49;UBERON:0005173!7.67e-12!49;UBERON:0002417!7.67e-12!49;UBERON:0000916!7.67e-12!49;UBERON:0009854!1.23e-11!23;UBERON:0009856!1.23e-11!23;UBERON:0002530!1.24e-09!65;UBERON:0009569!2.28e-09!66;UBERON:0002368!3.65e-09!60;UBERON:0002342!1.36e-08!10;UBERON:0005062!1.36e-08!10;UBERON:0000949!3.52e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.82e-19,22;UBERON:0007499,1.82e-19,22;UBERON:0006925,1.82e-19,22;UBERON:0009497,1.82e-19,22;UBERON:0000015,1.82e-19,22;UBERON:0002423,1.82e-19,22;UBERON:0006235,1.82e-19,22;UBERON:0008835,1.82e-19,22;UBERON:0003894,1.82e-19,22;UBERON:0004161,1.82e-19,22;UBERON:0008836,1.82e-19,22;UBERON:0009854,1.30e-18,23;UBERON:0009856,1.30e-18,23;UBERON:0002365,4.14e-17,25;UBERON:0002330,4.14e-17,25;UBERON:0005256,3.14e-12,45;UBERON:0005172,3.37e-11,49;UBERON:0005173,3.37e-11,49;UBERON:0002417,3.37e-11,49;UBERON:0000916,3.37e-11,49;UBERON:0002368,4.60e-09,60;UBERON:0003914,5.63e-09,47;UBERON:0003104,6.59e-09,61;UBERON:0009142,6.59e-09,61;UBERON:0002530,2.49e-08,65;UBERON:0009569,3.39e-08,66;UBERON:0003929,1.28e-07,55;UBERON:0000949,1.80e-07,72;UBERON:0005177,9.24e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.03991400112325,7.55584468292944,12.9955283489534,13.4408066129201,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0.29688427812965,0,0,0.230615497256059,0.452167921657868,0.823120949949934,4.27266410520897,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59712618552732,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,1.61457672169721,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:86816166..86816175,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=162 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:86816166..86816175,- | |||
|id=chr3:86816166..86816175,- | |||
|ontology_enrichment_celltype=CL:0000181!1.61e-12!5;CL:0000417!1.61e-12!5;CL:0000668!1.61e-12!5;CL:0000412!1.61e-12!5;CL:0000182!1.61e-12!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.02e-29,5;CL:0000057,6.88e-10,1;CL:0000632,6.88e-10,1;CL:0000223,1.58e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!4.73e-13!25;UBERON:0002330!4.73e-13!25;UBERON:0005256!1.83e-12!47;UBERON:0002369!2.21e-12!7;UBERON:0006858!2.21e-12!7;UBERON:0002107!3.11e-12!22;UBERON:0007499!3.11e-12!22;UBERON:0006925!3.11e-12!22;UBERON:0009497!3.11e-12!22;UBERON:0000015!3.11e-12!22;UBERON:0002423!3.11e-12!22;UBERON:0006235!3.11e-12!22;UBERON:0008835!3.11e-12!22;UBERON:0003894!3.11e-12!22;UBERON:0004161!3.11e-12!22;UBERON:0008836!3.11e-12!22;UBERON:0005172!7.67e-12!49;UBERON:0005173!7.67e-12!49;UBERON:0002417!7.67e-12!49;UBERON:0000916!7.67e-12!49;UBERON:0009854!1.23e-11!23;UBERON:0009856!1.23e-11!23;UBERON:0002530!1.24e-09!65;UBERON:0009569!2.28e-09!66;UBERON:0002368!3.65e-09!60;UBERON:0002342!1.36e-08!10;UBERON:0005062!1.36e-08!10;UBERON:0000949!3.52e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.82e-19,22;UBERON:0007499,1.82e-19,22;UBERON:0006925,1.82e-19,22;UBERON:0009497,1.82e-19,22;UBERON:0000015,1.82e-19,22;UBERON:0002423,1.82e-19,22;UBERON:0006235,1.82e-19,22;UBERON:0008835,1.82e-19,22;UBERON:0003894,1.82e-19,22;UBERON:0004161,1.82e-19,22;UBERON:0008836,1.82e-19,22;UBERON:0009854,1.30e-18,23;UBERON:0009856,1.30e-18,23;UBERON:0002365,4.14e-17,25;UBERON:0002330,4.14e-17,25;UBERON:0005256,3.14e-12,45;UBERON:0005172,3.37e-11,49;UBERON:0005173,3.37e-11,49;UBERON:0002417,3.37e-11,49;UBERON:0000916,3.37e-11,49;UBERON:0002368,4.60e-09,60;UBERON:0003914,5.63e-09,47;UBERON:0003104,6.59e-09,61;UBERON:0009142,6.59e-09,61;UBERON:0002530,2.49e-08,65;UBERON:0009569,3.39e-08,66;UBERON:0003929,1.28e-07,55;UBERON:0000949,1.80e-07,72;UBERON:0005177,9.24e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.03991400112325,7.55584468292944,12.9955283489534,13.4408066129201,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0.29688427812965,0,0,0.230615497256059,0.452167921657868,0.823120949949934,4.27266410520897,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59712618552732,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,1.61457672169721,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:86816166..86816175,- | |||
}} |
Revision as of 02:42, 14 September 2013
Short description: | p@chr3:86816166..86816175, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:86816166..86816175, - |
Coexpression cluster: | MCL_coexpression_mm9:162 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.02e-29 | 5 |
fibroblast | 6.88e-10 | 1 |
hepatic stellate cell | 6.88e-10 | 1 |
endodermal cell | 1.58e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 1.82e-19 | 22 |
epithelial sac | 1.82e-19 | 22 |
digestive gland | 1.82e-19 | 22 |
epithelium of foregut-midgut junction | 1.82e-19 | 22 |
anatomical boundary | 1.82e-19 | 22 |
hepatobiliary system | 1.82e-19 | 22 |
foregut-midgut junction | 1.82e-19 | 22 |
hepatic diverticulum | 1.82e-19 | 22 |
liver primordium | 1.82e-19 | 22 |
septum transversum | 1.82e-19 | 22 |
liver bud | 1.82e-19 | 22 |
digestive tract diverticulum | 1.30e-18 | 23 |
sac | 1.30e-18 | 23 |
exocrine gland | 4.14e-17 | 25 |
exocrine system | 4.14e-17 | 25 |
trunk mesenchyme | 3.14e-12 | 45 |
abdomen element | 3.37e-11 | 49 |
abdominal segment element | 3.37e-11 | 49 |
abdominal segment of trunk | 3.37e-11 | 49 |
abdomen | 3.37e-11 | 49 |
endocrine gland | 4.60e-09 | 60 |
epithelial tube | 5.63e-09 | 47 |
mesenchyme | 6.59e-09 | 61 |
entire embryonic mesenchyme | 6.59e-09 | 61 |
gland | 2.49e-08 | 65 |
subdivision of trunk | 3.39e-08 | 66 |
gut epithelium | 1.28e-07 | 55 |
endocrine system | 1.80e-07 | 72 |
trunk region element | 9.24e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.