FFCP PHASE1:Mm9::chr3:159158372..159158402,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76131|HGNC=|MCL_coexpression_id=49|UniProt=D3Z6J1,Q8CIG0|association_with_transcript=0bp_to_ENSMUST00000120272,NM_001172092,NM_001172093,NM_029523,uc008rvy.2,uc008rvz.2,uc008rwa.2_5end|description=CAGE_peak_1_at_Depdc1a_5end|id=chr3:159158372..159158402,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001048,4.27e-07,134|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0,0,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,2.33176833270964,9.31386229993199,5.59649502502517,0.473193248037357,0.274228867211478,0,0.17008658030214,2.48227378002213,1.56719873483361,0.95995453676044,0.68822784320151,0.57423196411502,0.86152399231815,2.37018355954478,0.760093677825496,0.504060259519861,1.77384408524244,1.90509202037889,0,0,0.866554859253824,0.831173226792462,1.42918549383658,2.92972141515835,2.3440060335714,5.75876118371178,1.17646297606203,2.73218193983378,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0,1.28629718017973,0.85960031981627,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.933206510776299,0.270011876663381,0.630974884054146,0.571301968807607,0.220868540951614,0.489963196859816,0.383381884072945,1.83843757322004,0,0,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.996601765593721,0.559198337475902,0.151452386666368,2.64500460373749,0,0,0,0,0,0,0.421333260395256,2.89731548382698,0.779358013808606,1.41335829804136,1.69012103732017,1.28326477414318,0,0,1.73192832808971,1.52015919285059,3.53867111510348,0.22836775943812,1.03575153458869,0,1.73485326766136,3.04465478312141,1.84492397804847,1.3565037649736,2.3517741427141,0.376999773989026,0,0,2.65383165584962,2.58826959915855,3.09178125844551,2.90925151881133,1.86391761218122,0,0,0.255457055208591,2.75574786363617,1.79970819298022,1.77898317902291,0,0,0.376963056338593,0,0,0,0,3.25885964321012,1.99051152976149,0,0,2.47228841629137,2.98872735763515,4.32149111532838,3.76762044589288,2.58538696775046,4.22775276940004,2.62364828767241,0,1.94011193639558,5.8622884852024,4.75068035242662,3.06874025398605,3.89266148915837,4.179025998266,2.26360350048738,2.38841120182192,0,0,1.98914449576915,4.14251545071004,3.75241695969754,4.32148947506436,4.26140524053378,3.93528463494808,3.85667782218446,3.25547522650571,2.14618721119695,1.98501082024188,2.30383789878873,2.13417703302824,0.324275238183423,0,0,0.671032093801859,0,1.02904612379284,0,0.528901133327089,4.47905326123991,5.80591679651096,5.15469845288373,2.01683524623343,1.11189021922435,1.90225626112559,0.474529061544512,0.164698954724011,1.00534083520108,0.994782360205754,0.58489226135736,0,0.432276099749388,0.199141273254367,1.89667900953082,3.08470984046268,4.50830942692322,2.03651327845314,2.13347735884388,2.59502533594179,1.89709611372772,0.147610147979602,0.156998727841375,0.246794327843601,0,4.17112764290235,5.30709286805648,7.42044970870017,4.86864291332407,6.27060615356284,5.60176873919124,2.87696137450811,2.91843408195064,1.92192989231657,2.87536413054709,2.60498663367952,0.624075346229121,0.252578877947112,0.717589654087649,0.482443521363367,0.184753190166605,4.16881105895066,8.47417877498535,4.2436271443797,4.22442446919304,5.02518772325447,0.952174563544055,0,2.04925687338048,1.99318220683897,1.11618338060241,0.163863314715738,0.863424909329478,0.723245292907558,0,0,0.491764273019036,0.551873492609465,0,0,3.27869890753351,1.00988370881749,4.41711507182759,4.29482618726302,2.15423397732799,2.15071918157297,0.891194696329576,1.98153571552183,3.64329631507405,1.16902343164525,2.37172666767914,0,0.709700426041343,0.890328018336276,2.44330439030364,0.824850614862677,0,3.64170954232472,1.51161778482376,2.64047111658257,0.590603785761546,2.45948118355142,1.55056975900933,2.90826983582004,2.85197902707777,1.58018378967908,0,1.03135543248187,0.340439605753788,3.6012218806262,0.388076051348264,1.07168517515796,3.19212420556092,1.24858172321449,0.987294123612726,0.913394847343798,0.469343416127421,0,0.220528398054962,1.15420377059036,1.61464426695906,3.73940134554566,2.98430860007841,2.29797259643086,0.582961673259701,0,3.07567585436135,2.06386867963222,5.55583582109135,5.27431679613135,6.69801715833023,4.80434163733698,1.86976272993241,1.25956307091292,0.967399816630967,0.954670618015114,5.3777118908793,5.69294507955176,3.45617090629764,3.76358932826044,2.83871332870031,2.42755823492677,1.57041565878138,0,0.648074866458964,0,0,2.8408143748356,3.47462829959905,4.27792614356905,2.97067593998782,3.21016638432478,4.5769323071844,2.73429208172295,1.99232754408851,0.483168241652012,0.288030006257865,1.89606672376907,1.82452693761148,2.46506297195585,1.81889152168913,3.75956060901711,3.9736270956253,3.4856680360791,3.2491695978407,3.73575864808146,3.12447907285499,3.02478555410522,2.53390489923356,2.50150788264857,1.9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| ||
|EntrezGene=76131 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|UniProt=D3Z6J1,Q8CIG0 | |||
|association_with_transcript=0bp_to_ENSMUST00000120272,NM_001172092,NM_001172093,NM_029523,uc008rvy.2,uc008rvz.2,uc008rwa.2_5end | |||
|description=CAGE_peak_1_at_Depdc1a_5end | |||
|id=chr3:159158372..159158402,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,4.27e-07,134 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0,0,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,2.33176833270964,9.31386229993199,5.59649502502517,0.473193248037357,0.274228867211478,0,0.17008658030214,2.48227378002213,1.56719873483361,0.95995453676044,0.68822784320151,0.57423196411502,0.86152399231815,2.37018355954478,0.760093677825496,0.504060259519861,1.77384408524244,1.90509202037889,0,0,0.866554859253824,0.831173226792462,1.42918549383658,2.92972141515835,2.3440060335714,5.75876118371178,1.17646297606203,2.73218193983378,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0,1.28629718017973,0.85960031981627,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.933206510776299,0.270011876663381,0.630974884054146,0.571301968807607,0.220868540951614,0.489963196859816,0.383381884072945,1.83843757322004,0,0,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.996601765593721,0.559198337475902,0.151452386666368,2.64500460373749,0,0,0,0,0,0,0.421333260395256,2.89731548382698,0.779358013808606,1.41335829804136,1.69012103732017,1.28326477414318,0,0,1.73192832808971,1.52015919285059,3.53867111510348,0.22836775943812,1.03575153458869,0,1.73485326766136,3.04465478312141,1.84492397804847,1.3565037649736,2.3517741427141,0.376999773989026,0,0,2.65383165584962,2.58826959915855,3.09178125844551,2.90925151881133,1.86391761218122,0,0,0.255457055208591,2.75574786363617,1.79970819298022,1.77898317902291,0,0,0.376963056338593,0,0,0,0,3.25885964321012,1.99051152976149,0,0,2.47228841629137,2.98872735763515,4.32149111532838,3.76762044589288,2.58538696775046,4.22775276940004,2.62364828767241,0,1.94011193639558,5.8622884852024,4.75068035242662,3.06874025398605,3.89266148915837,4.179025998266,2.26360350048738,2.38841120182192,0,0,1.98914449576915,4.14251545071004,3.75241695969754,4.32148947506436,4.26140524053378,3.93528463494808,3.85667782218446,3.25547522650571,2.14618721119695,1.98501082024188,2.30383789878873,2.13417703302824,0.324275238183423,0,0,0.671032093801859,0,1.02904612379284,0,0.528901133327089,4.47905326123991,5.80591679651096,5.15469845288373,2.01683524623343,1.11189021922435,1.90225626112559,0.474529061544512,0.164698954724011,1.00534083520108,0.994782360205754,0.58489226135736,0,0.432276099749388,0.199141273254367,1.89667900953082,3.08470984046268,4.50830942692322,2.03651327845314,2.13347735884388,2.59502533594179,1.89709611372772,0.147610147979602,0.156998727841375,0.246794327843601,0,4.17112764290235,5.30709286805648,7.42044970870017,4.86864291332407,6.27060615356284,5.60176873919124,2.87696137450811,2.91843408195064,1.92192989231657,2.87536413054709,2.60498663367952,0.624075346229121,0.252578877947112,0.717589654087649,0.482443521363367,0.184753190166605,4.16881105895066,8.47417877498535,4.2436271443797,4.22442446919304,5.02518772325447,0.952174563544055,0,2.04925687338048,1.99318220683897,1.11618338060241,0.163863314715738,0.863424909329478,0.723245292907558,0,0,0.491764273019036,0.551873492609465,0,0,3.27869890753351,1.00988370881749,4.41711507182759,4.29482618726302,2.15423397732799,2.15071918157297,0.891194696329576,1.98153571552183,3.64329631507405,1.16902343164525,2.37172666767914,0,0.709700426041343,0.890328018336276,2.44330439030364,0.824850614862677,0,3.64170954232472,1.51161778482376,2.64047111658257,0.590603785761546,2.45948118355142,1.55056975900933,2.90826983582004,2.85197902707777,1.58018378967908,0,1.03135543248187,0.340439605753788,3.6012218806262,0.388076051348264,1.07168517515796,3.19212420556092,1.24858172321449,0.987294123612726,0.913394847343798,0.469343416127421,0,0.220528398054962,1.15420377059036,1.61464426695906,3.73940134554566,2.98430860007841,2.29797259643086,0.582961673259701,0,3.07567585436135,2.06386867963222,5.55583582109135,5.27431679613135,6.69801715833023,4.80434163733698,1.86976272993241,1.25956307091292,0.967399816630967,0.954670618015114,5.3777118908793,5.69294507955176,3.45617090629764,3.76358932826044,2.83871332870031,2.42755823492677,1.57041565878138,0,0.648074866458964,0,0,2.8408143748356,3.47462829959905,4.27792614356905,2.97067593998782,3.21016638432478,4.5769323071844,2.73429208172295,1.99232754408851,0.483168241652012,0.288030006257865,1.89606672376907,1.82452693761148,2.46506297195585,1.81889152168913,3.75956060901711,3.9736270956253,3.4856680360791,3.2491695978407,3.73575864808146,3.12447907285499,3.02478555410522,2.53390489923356,2.50150788264857,1.98690733708667,0.226730383615211,2.66383144048878,0.897138566094757,2.01461539636894,0,0.93841237725591,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,4.56664329370377,3.99024873401031,2.90247129782028,3.40349403895612,2.51535795153579,3.12533964365024,1.11123363900808,1.85431551515005,3.85103051510178,2.27427490587418,3.29523089857312,2.82939512079114,2.43467919421694,1.98477972455095,1.95280594449085,2.85776214769844,1.50649623728312,1.92909220463705,1.64834360321323,2.502381642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| |||
|short_description=p1@Depdc1a | |||
}} |
Revision as of 01:55, 14 September 2013
Short description: | p1@Depdc1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Depdc1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:49 |
Association with transcript: | 0bp_to_ENSMUST00000120272, NM_001172092, NM_001172093, NM_029523, uc008rvy.2, uc008rvz.2, uc008rwa.2_5end |
EntrezGene: | Depdc1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 4.27e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.