FFCP PHASE1:Mm9::chr11:102758074..102758083,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=205|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:102758074..102758083,+|id=chr11:102758074..102758083,+|ontology_enrichment_celltype=CL:0002453!7.79e-34!8;CL:0000333!7.36e-27!10;CL:0000095!7.36e-27!10;CL:0000243!7.36e-27!10;CL:0000123!7.36e-27!10;CL:0000125!7.36e-27!10;CL:0000030!7.36e-27!10;CL:0000339!7.36e-27!10;CL:0000128!1.54e-25!6;CL:0000126!1.54e-25!6;CL:0000127!1.54e-25!6;CL:0002319!2.30e-19!43;CL:0000221!7.25e-19!44;CL:0000133!7.25e-19!44;CL:0000055!2.76e-16!50;CL:0002321!7.20e-11!70;CL:0000220!7.20e-11!70;CL:0000864!6.98e-10!2;CL:0000878!6.98e-10!2;CL:0000129!6.98e-10!2;CL:0002604!6.98e-10!2;CL:0002605!6.98e-10!2;CL:0002603!1.83e-09!2;CL:0002611!2.02e-09!2|ontology_enrichment_celltype_v019_2=CL:0002453,1.33e-59,8;CL:0000333,1.01e-47,10;CL:0000095,1.01e-47,10;CL:0000243,1.01e-47,10;CL:0000123,1.01e-47,10;CL:0000125,1.01e-47,10;CL:0000030,1.01e-47,10;CL:0000339,1.01e-47,10;CL:0000128,1.28e-40,6;CL:0000126,1.28e-40,6;CL:0000127,1.28e-40,6;CL:0000878,6.43e-21,2;CL:0002605,6.43e-21,2;CL:0000129,6.43e-21,2;CL:0002604,6.43e-21,2;CL:0002611,7.62e-20,2;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0002321,4.95e-11,70;CL:0002194,5.77e-11,4;CL:0000766,5.77e-11,4;CL:0000234,5.77e-11,4;CL:0000576,5.77e-11,4;CL:0000235,5.77e-11,4;CL:0000864,5.77e-11,4;CL:0002009,5.77e-11,4;CL:0000040,5.77e-11,4;CL:0000559,5.77e-11,4;CL:0000219,9.06e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.35e-17!73;UBERON:0005743!2.35e-17!73;UBERON:0000073!8.27e-17!75;UBERON:0001016!8.27e-17!75;UBERON:0003076!4.40e-16!12;UBERON:0003057!4.40e-16!12;UBERON:0001948!3.12e-13!5;UBERON:0002315!3.12e-13!5;UBERON:0004121!1.63e-11!102;UBERON:0000924!1.63e-11!102;UBERON:0006601!1.63e-11!102;UBERON:0002240!4.70e-11!6;UBERON:0005174!4.70e-11!6;UBERON:0001137!4.70e-11!6;UBERON:0001049!5.02e-11!52;UBERON:0005068!5.02e-11!52;UBERON:0006241!5.02e-11!52;UBERON:0007135!5.02e-11!52;UBERON:0002256!2.02e-09!2;UBERON:0002346!8.58e-09!71;UBERON:0003075!8.58e-09!71;UBERON:0007284!8.58e-09!71;UBERON:0004733!7.80e-07!6;UBERON:0004732!7.80e-07!6;UBERON:0002028!7.80e-07!6;UBERON:0007277!7.80e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002256,7.62e-20,2;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0001948,1.56e-08,5;UBERON:0002315,1.56e-08,5;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003076,8.13e-08,12;UBERON:0003057,8.13e-08,12;UBERON:0002240,2.94e-07,6;UBERON:0005174,2.94e-07,6;UBERON:0001137,2.94e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,5.93152693383074,2.72201858703997,1.25987779462826,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49400165777607,3.07374644257244,0,0,0,1.14260393761521,1.32521124570968,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr11:102758074..102758083,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=205 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:102758074..102758083,+ | |||
|id=chr11:102758074..102758083,+ | |||
|ontology_enrichment_celltype=CL:0002453!7.79e-34!8;CL:0000333!7.36e-27!10;CL:0000095!7.36e-27!10;CL:0000243!7.36e-27!10;CL:0000123!7.36e-27!10;CL:0000125!7.36e-27!10;CL:0000030!7.36e-27!10;CL:0000339!7.36e-27!10;CL:0000128!1.54e-25!6;CL:0000126!1.54e-25!6;CL:0000127!1.54e-25!6;CL:0002319!2.30e-19!43;CL:0000221!7.25e-19!44;CL:0000133!7.25e-19!44;CL:0000055!2.76e-16!50;CL:0002321!7.20e-11!70;CL:0000220!7.20e-11!70;CL:0000864!6.98e-10!2;CL:0000878!6.98e-10!2;CL:0000129!6.98e-10!2;CL:0002604!6.98e-10!2;CL:0002605!6.98e-10!2;CL:0002603!1.83e-09!2;CL:0002611!2.02e-09!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.33e-59,8;CL:0000333,1.01e-47,10;CL:0000095,1.01e-47,10;CL:0000243,1.01e-47,10;CL:0000123,1.01e-47,10;CL:0000125,1.01e-47,10;CL:0000030,1.01e-47,10;CL:0000339,1.01e-47,10;CL:0000128,1.28e-40,6;CL:0000126,1.28e-40,6;CL:0000127,1.28e-40,6;CL:0000878,6.43e-21,2;CL:0002605,6.43e-21,2;CL:0000129,6.43e-21,2;CL:0002604,6.43e-21,2;CL:0002611,7.62e-20,2;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0002321,4.95e-11,70;CL:0002194,5.77e-11,4;CL:0000766,5.77e-11,4;CL:0000234,5.77e-11,4;CL:0000576,5.77e-11,4;CL:0000235,5.77e-11,4;CL:0000864,5.77e-11,4;CL:0002009,5.77e-11,4;CL:0000040,5.77e-11,4;CL:0000559,5.77e-11,4;CL:0000219,9.06e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.35e-17!73;UBERON:0005743!2.35e-17!73;UBERON:0000073!8.27e-17!75;UBERON:0001016!8.27e-17!75;UBERON:0003076!4.40e-16!12;UBERON:0003057!4.40e-16!12;UBERON:0001948!3.12e-13!5;UBERON:0002315!3.12e-13!5;UBERON:0004121!1.63e-11!102;UBERON:0000924!1.63e-11!102;UBERON:0006601!1.63e-11!102;UBERON:0002240!4.70e-11!6;UBERON:0005174!4.70e-11!6;UBERON:0001137!4.70e-11!6;UBERON:0001049!5.02e-11!52;UBERON:0005068!5.02e-11!52;UBERON:0006241!5.02e-11!52;UBERON:0007135!5.02e-11!52;UBERON:0002256!2.02e-09!2;UBERON:0002346!8.58e-09!71;UBERON:0003075!8.58e-09!71;UBERON:0007284!8.58e-09!71;UBERON:0004733!7.80e-07!6;UBERON:0004732!7.80e-07!6;UBERON:0002028!7.80e-07!6;UBERON:0007277!7.80e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002256,7.62e-20,2;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0001948,1.56e-08,5;UBERON:0002315,1.56e-08,5;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003076,8.13e-08,12;UBERON:0003057,8.13e-08,12;UBERON:0002240,2.94e-07,6;UBERON:0005174,2.94e-07,6;UBERON:0001137,2.94e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,5.93152693383074,2.72201858703997,1.25987779462826,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49400165777607,3.07374644257244,0,0,0,1.14260393761521,1.32521124570968,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr11:102758074..102758083,+ | |||
}} |
Revision as of 18:22, 12 September 2013
Short description: | p@chr11:102758074..102758083, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102758074..102758083, + |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.33e-59 | 8 |
migratory neural crest cell | 1.01e-47 | 10 |
neuron associated cell | 1.01e-47 | 10 |
glial cell (sensu Vertebrata) | 1.01e-47 | 10 |
neuron associated cell (sensu Vertebrata) | 1.01e-47 | 10 |
glial cell | 1.01e-47 | 10 |
glioblast | 1.01e-47 | 10 |
glioblast (sensu Vertebrata) | 1.01e-47 | 10 |
oligodendrocyte | 1.28e-40 | 6 |
macroglial cell | 1.28e-40 | 6 |
astrocyte | 1.28e-40 | 6 |
central nervous system macrophage | 6.43e-21 | 2 |
astrocyte of the cerebral cortex | 6.43e-21 | 2 |
microglial cell | 6.43e-21 | 2 |
astrocyte of the hippocampus | 6.43e-21 | 2 |
neuron of the dorsal spinal cord | 7.62e-20 | 2 |
neural cell | 4.15e-18 | 43 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
embryonic cell | 4.95e-11 | 70 |
monopoietic cell | 5.77e-11 | 4 |
myeloid leukocyte | 5.77e-11 | 4 |
phagocyte | 5.77e-11 | 4 |
monocyte | 5.77e-11 | 4 |
macrophage | 5.77e-11 | 4 |
tissue-resident macrophage | 5.77e-11 | 4 |
macrophage dendritic cell progenitor | 5.77e-11 | 4 |
monoblast | 5.77e-11 | 4 |
promonocyte | 5.77e-11 | 4 |
motile cell | 9.06e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
dorsal horn of spinal cord | 7.62e-20 | 2 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
regional part of spinal cord | 1.56e-08 | 5 |
gray matter of spinal cord | 1.56e-08 | 5 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
posterior neural tube | 8.13e-08 | 12 |
chordal neural plate | 8.13e-08 | 12 |
spinal cord | 2.94e-07 | 6 |
dorsal region element | 2.94e-07 | 6 |
dorsum | 2.94e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.